LOC122344926 (LOC107730532,LOC107664579,LOC107674210,LOC107746658,LOC107556811)


Basic Information

Item Value
gene id LOC122344926
gene name LOC107730532,LOC107664579,LOC107674210,LOC107746658,LOC107556811
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20445132 ~ 20450119 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238579.1
CTCCCCTGGATGCATCACTTGTGATTGTCGTTGACTATGTGAAAAGATCTCAACGTCTTCTCCacaaattaaacttaaaaccaTGCCCGATGGGAGCGCGGACGACTACGACGGGTTTCAGACCCAGTTCGCGCACATCATGGAAACTATTTTACAGACTGCTGTCAGGGAAGCGACAAAACTTTACGACGGCACTTTGCAGCGCTTGAAAGCGGAATTGGTGCAGCTGAGACAAGACAAAGTCAACACGAAGACAGGTGATACGTCCATCCAGAGCACAAAGAGGTTCTCCGACGCCGGGAAACAGGGGGCTGGAACCGGCTCTAAACGTGATATTGGTGTGCAGTGTGaaaagCCCACTTTGGTTGACCGGGGATGCAGCCCTCTTCAGTTTCTAGACCATCTTAATGTTGGAGACATAACTAGCGATAAACTCACAGATCTATGTGCCAGTGAGGATGGGAACAGACAGCTTGCATTGCTGCTCATTAAAAAAGAGCCTCAAGAGACTGAATGCAACAGCTATGCACCAGGATACTTTCTACTAAAGCAAGAGGGTGCTGAGCCCATACTGGTGCGGAGAGAGCCAAATAAGGACACCGTGGAAAGGGTTGTGATCCCACCAGCATTGCAAACAATAACCAGGCCCAATAACAACCAAAAAGGAAAGTCACCACCACCACCGGAGATTCCTTCATCTCGTAATCGCAGAGTAGATTCCAGTAGTCCAAAACCCAATCAAACTATAAAGCCCAGCAGAGGTACATCTGAAAGAACATTGGAAAACACAGAAGGCTTTTCTtcccaaaacaaaaatcagaatGCCAGTGTACCAGCGCAGACATCCACTTTTTCAACACTTCCCAATTCAACACAGACTCCTGCATCCAATGTTAACTCATCCGTGCCAATGATTGAGCTGTCTGGTGCTCCATCAGTTCCTCCAACCAAGCCAGCAGCTTCATTAGTTCATCGCCGACCAAACCCAAATCCTCAGACATCAAACCAGAAAGTAGTCCTTCAGAAAGAGGGGTCAAATATCTGTCAAAACGCCTGCCTAACTCCTGTTCCTCCAAGTCAAGTCTCATTAACCGAGCCTCATTCCTCCAAACAACGAGTTCAGACATTGTTTTCACATACTGAGAAATCTCTCTCAACTGTTGCCTCGCTAAACCAGGCCACTGAGCCATTGCCCCAATGTTCCTCTCAACTTACACAGCCACCGTTCTTTCCACCACAATTTGTAAAAACACCAGCCCAAGCGATGACTCCACAAATACACGCTGTCATGCCATCAGGACACGTTCCTGTCACAGCAGCTCCAAATACACTTCCACCAGTCCAGGATCAGATCCTCTCAACCGGGATTGTTCCTCCTCAATCCCAAGTTTTTGCATCCCCACAGGTAATGCCAGCACATTCTGTGAATTCAAGTTCAGCATACCAGTTCCCTTTGGTTCTGCCACACAATCCAGTTCAGGCGGCGCCACCTTCTTATCTTCCAACACATGTTCCATTTACTTCTCCACATATTTCAGTTAACGCCCTTCAGGGATCCGTCTCCTTAAACCCACCTCAACCTCCGCTCACGCAGTCTCAATATTCACCACAATCCGATCATTTCTCCTCTTCTACAGACCAGTATTTTCCTCCATCCGATAGCCCGCCAGGTTTGCTTGAATCGCTTGATACTTTGCATTTGAATTCGTCTGTCGTGATAACGCCACAAGATGCTCCAGAGCAGGCACCGATGCACCATTTTCAGCCGTCTGGGCAGTTTGCGCCCCTGCTAACACTGAAGGAGCAACAAGCCGGCGCTACAGCTAACGTTGTTTTAGGGCGACTACCCATTCCGTCTGTAGATACCTCTGCATCTCCCGTCCACAACTTCGAAGCAGATGTACCATTTTCCACATGTTGCACAGAGAGAAATGACAAAGACCTCTCAGAAGATGATGACACACCCACACTCCAGTCTAGACtgagaaaacagagaaagatTTGCTCCAAATTGAGACAAACAGATGCTGAAGGTGAGGATGGCACACTTACAGTAAAGGATAAGAAGGTGGATCAGGTGCAGAACAACTTAAGTGAAACACCACGTTCCGGGTCGATTAACGGAAAACAGCTATTTCCAAAACTTTCCGGTAAAACCCTGCAGAGAAATACGAAGTGTCCCCAGTGCGGAAGGGTCCTCAGCAATGCATCAGCCTTGGAGAACCACATGAGACTTCATACTGGCGAAAGACCTTACACGTGTTCCCAGTGTGGAAAGGCGTTTCCTAGTGTCCGAGGTCTTAACAGGCACGTGAAGGTCCATGCAGAGGAGAAGCGCTATCAGTGTGagcagtgcgggaagagttttgTGTACCACTTCACCCTTACTAAACATCAGCTTATTCACTCTGGAGAAAGGCCATTTCCTTGTAAGGTTTGCGGAAAGAGATTTTTGGCCAAGGCAGACCGGGCTACCCATATGCGGAtgcacaccggagagaagccgttctCGTGCACTCTATGCGGGAAGAAGTTTAAACACCGAGTCGCTTTGAACATGCATATGCAGGGGCATAGAGGAGAGAAACGCTACATCTGCCCCCACTGTGAAAAGGGATTTGTGGATCTAGGCAATTTTAAAAGACACAAGCTCATCCACACAGGGGAAAGACCGTTTGAGTGCAAGCAATGTGGGAAGCGCTTTACTCAGTCGGCCCATCTCAAGAAACATGTCAACACTCAGCATGTTACATGAAGAAAATCGTTTCGATTGTTTCAGTTTATCTACTGATAAATATTCTgttgcagaaaataaaatggtatCAGGCATcactgtaaattaatttatgaagacgcatttttaaaagagaaaagtaaaaaaaataactgctttaATTACAGGCTATTCCATAACTCGGttacaaaagtacattttatttcttgtaaGTACCATGGCTTctactaagtacctaattaggtaattactctttattatgacactttaaaataaagggtCACCAACTGCTTGCtattatttaaagtgctttaatgAAGCACGTTTAAAATGTGAACTAACTTGATgatttttctattcttttataaatgtgaaaCTTAATgcttgttcatttttatgtgtataaattgtatttttctacTGTCCATCCTATTAAacaaatatcaataaaacaccTTGTGTCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC107730532 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238579.1 True 3198 mRNA 0.45 4 20445132 20450119

Neighbor

gene id symbol gene type direction distance location
LOC122345104 LOC107552254,LOC107664557,LOC107730505 coding downstream 10761 20430808 ~ 20434371 (-)
cabp2a cabp2a,LOC107556818,LOC107551591,LOC107730525,LOC107674218,LOC107746641,LOC107664568 coding downstream 17321 20413591 ~ 20427811 (-)
ctnnd1 ctnnd1,LOC107664559,LOC107746596,LOC107674216,LOC107730519 coding downstream 43416 20377317 ~ 20401716 (-)
LOC122344866 NA coding downstream 68548 20369531 ~ 20376584 (-)
unc93b1 unc93b1,LOC107730513,LOC107664560,LOC107746565,LOC107674251 coding downstream 78581 20355235 ~ 20366551 (-)
cisd2 cisd2,LOC107552739,LOC107746991,LOC107556804 coding upstream 243146 20693265 ~ 20695767 (-)
LOC122349971 lrrtm2,LOC107680618,LOC107750357 coding upstream 931582 21381701 ~ 21384924 (-)
LOC122348874 LOC107552383 coding upstream 961744 21411863 ~ 21415844 (-)
LOC122342190 LOC107689477,LOC797212,LOC107682957 coding upstream 1089647 21539766 ~ 21548066 (-)
smox smox,LOC107689473,LOC107551688,LOC107551695,LOC107692173 coding upstream 1117983 21568102 ~ 21577369 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding downstream 338 20442952 ~ 20444794 (-)
LOC122345304 NA non-coding downstream 178949 20265285 ~ 20266183 (-)
G4870 NA non-coding downstream 180063 20199995 ~ 20265069 (-)
LOC122345298 NA non-coding downstream 287609 20155664 ~ 20157523 (-)
G4713 NA non-coding downstream 506731 19938019 ~ 19938401 (-)
G4930 NA non-coding upstream 9422 20459541 ~ 20460184 (-)
G4934 NA non-coding upstream 16043 20466162 ~ 20469015 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding upstream 163797 20613916 ~ 20702298 (-)
LOC122349798 NA non-coding upstream 253357 20703476 ~ 20718890 (-)
G5047 NA non-coding upstream 1162799 21612918 ~ 21620581 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other downstream 76021 20367129 ~ 20369111 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other downstream 132184 20289317 ~ 20312948 (-)
si:dkey-9i23.16 NA other downstream 304553 20137035 ~ 20140579 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 905986 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 2564715 17811459 ~ 17880417 (-)
G4958 NA other upstream 233723 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 456051 20906170 ~ 21410571 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other upstream 1099498 21549617 ~ 21564077 (-)
G5104 NA other upstream 1268020 21718139 ~ 21766284 (-)
G5108 NA other upstream 1274268 21724387 ~ 21772762 (-)

Expression


Co-expression Network