slc43a3a (slc43a3a,LOC107746630,LOC107674217,LOC107730523,LOC107664567,LOC107551582)


Basic Information

Item Value
gene id slc43a3a
gene name slc43a3a,LOC107746630,LOC107674217,LOC107730523,LOC107664567,LOC107551582
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20406419 ~ 20413525 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238893.1
ACAACACTGCGGCAATTCCGTCTTTCCTATCGATATGACAGAAGACCGTTGTAAGTAGAAGTCTATTTGCAGTTACAGTCATTTCGCAGGAAAAACAATTGAAATTCATACTGCATGGCTGATGCCCACAGATTTGCTCTTGCATAAATTCGGAGTGCAAATGCAATCATAATCCATTtgcttttatggttttaattgaATTAGATTAGACGCCCTTTTAGCATTATATCGGATATCGCTTGTAGGCTATCCGGTACGTTATCTTTTACATTATCCATAAAAACTGTGGACGAGGAAAACTGTTGTTCCTGTTAGAGAGATTAGAGCCCGCAGACGTGGTAATCTGGATTAGTCGACTGTCCAGAGCGCGCGCATGTGTGCCATCAGTGATCAACTTCAGTTTTACCCTATGTCACATTTCAAGAAACCTAGACACTGATGCAGCACGTCTTAACTGCTAAATTACAATTATGTAAGGGATACTGGACGGACAGCCGGTCTTTATAACTAGAAAAAAAGCCTCTTCATCCGGGTTATCCAAGTGTTCCTCTTTACGTCAGGGTCTTCGTAACcctttcagattttatttgCGATATCTTGATGCGCATTTTTCTTCCTCGCAATGCATAAACATAGGcagaaaatattgatttattgatttgagAAAATATTGAATCACGTATAATatctataacattattaataaatgttaaactacTAGGCTAATAATACTACTACAATTAATGCTGTTGCTGCATCATTCTGCCATTTAAATTGCTATATAAATCCCACATGATGCCGAGATGGTGCTACTGTAATTAGCGACGAAAATGTCCAGTATAGAGatgtttttgtacaaaatagTTGGTCGTTGCTCAGCGTtgcgactgaccaatcagaatcaggtgTGGTAGGGCGCTGATATCCTtgctttaaacaatatttttattgattaagtGCAATTGCATCAGTAAAATGCGactttgtctgtctgtgtcttctTGCAGTTTTACATAACCTTCAGATACATGCACAGTTTTAGAGGGCGAGAATTTTAGGGATAAGCCTACAAACTGAAAAGGATAGTGGTGGCCTATACAAAGATGCTGACAGCAAACATGAATGCGATCCCACAAATAGCTCAGAAGCAACACATTTCATGCCAACTCCCTAAATGTTCCGTCACATTGTTTTCGACGGCAGATCTATAGCCCCCTCTCTTGAGAGGAACATGCACAGCTTCAATTTAGTCCAAGTACGTGGAGAACGTTATCTCCGCCACCATACACCAGACCCGCGTAGTCTCTTTCTAGTCGAATATGAGCAAGCTTTAACACAAGTAAGAGGAGTGGATCAGCGATTAGGGTGATGCGTTTAagattacaattaatttaacaacatacAGTGGCAAGCATATATAGCTCACTTTCCTACAGAAGTGGATAGTTCTAGAAGCGTTCCTGACCCTGACGGCGTGGATGCGCGAAAGATGCTGGGATGCAAGGGATCATCTGGGACCGGGGTGAGATACAAGCTGACTCTGGCTACAGGACTGCTGGAGTGCTTGTGTTTTGCCGGAGTCGTGTTTGGTTGGGCGTCTCTCGTGTTTGTCCTGAAGACAGATGGCTACTTCAGCGATTTGTGCATCAATGCAACAGACACTAATGGAAAACCTGGCACAGaCTGCGGCCTGCAAGATGAGAATTTCTCATTGGTTTTCACCGTGGCCTCCTTCATGAACAACTTTCTCACTCTGCCCAACGGATTCTTCTACGACCATTTCGGCACGATGGCAACGCGATTTTTGGCTATATTTCTTTATACCACTGGCACTCTTATTGTGGCGTTGTCCAGTAAAGCTCTCTCGATCTTGCTTTTTCCTGCTCTTTCCTTCGTAGCGGTGGGaggtattttatttctaatgacAAATATGCAGGTGGGGAACCTTTTTGACTCTCATAGATCAACAATTATTACAGTCTATAATGGGGCCTTTGACTCTTCATCAGTTATCTTTCTTATCATCAagGTGCTTTATGAGAGAGGGGTTTCTCTTCGCTCCTCATTTCTCTTCCTGTCAGCCTGTAATATCATTCATCTCCTCCGGACTCTTTTCCTTATGCCTAAATCACACATTCCCTATCCCATCACAGAAGACTACAAATATGGGCTGAGCTGTGCCAAATCACATAGCTACAACGTTGAACAGCACGAGGCAGAGCCAGAGATGAGATCAGACAGAGGCAGAGGTGTAGCTGATGAGCCACTACAGTCTGACACACTACAGCTAACAGAAAACTCTGAGAAAGACAGTTTTAAGAGCTGTGTTCTGTCCTGGTTCTTCCTGTGGCACCTCATATGGCTGTCAGTCATGCAGCTGCGCCATTATTTCTTCATTGGAACTCTGAATCCAATGCTCGACAGACTGGCAAACCAAGACCCGGACATTGTGAGTGAGTACACCAATGCGTTTGCTTTCACACAGTTCTGTGGCGTTCTCTGTGCTCCCTGGAATGGGCTGCTAATGGACAGACACAAAGGAAAGCCCCTAGATCCAGGTGTGTCAGAACGGGAAGCAGACCTGCGCTCGTCCGTTCTGTCTCTCCTCCTCACCTCTCTGCAGTGCCTGTTGTTCTCCGTCTGTGCAAGCATTCCCTTCCTCCCTCTCCAGTACCTCACGTTCATCCTTCAGGTCCTTAACCGCTCTTTTCTGTACGGAGGGAATGCTGCATTCATCAGCATAGCGTTCCCAGCTCGTCATTTTGGAAAGCTGTATGGTCTGGTGATGTCTCTATCGGCTGTGGTGTCATTGCTGCAGTATCCCTGCTTCGCCCTCAACAAAGTTCTTGAAGGAGACCCCTTCTATGTGAACATCATCTTGACTGTCCTGACTCTGCTGGCCTTCATTCATCCTGTCTATGTGTTTCGTCACTGCAGAGAGCTGGCAAAACAGCGAGAGAAttacaaactaaatatttcagaaGCCTCCATACAGGAAACAtcaatgtattaatttaaatagaCATACTTGATTAATACATATAACTGACAAAGGGAAAAATAATAAGCATTAGGTATTTAACGCAATGTTTTACCATCGTTGTATTTTAGAGATTTAAATACTTGAAAATAAGAGTTAACAGTCAGCAATTAAAttcattccattttattttaattggtaATATTTACAATCTTTATTTGTAAagtacagaaatatatatatatattttttgagttGGCAAGAACAGAAATTTAGATACAAGTATTTGTTTAAACATATTGATTAAGGAGCAAGGGGAGGTCACATGGGTGTCCGAAACATACAGATTTTTACATGGGATCTGCAAGCTCTTCCGGAGTTGTATGATATCCAGTTGCATGTTAATATCCTGTTTTCCCACAGGGAAAGCATTAACAGTCCTAAAAGCATCATACAGTTAATTCATGTCCATTCAGGGGTTTATAGCATGTTTTATACATAACGTGTGCTACAGCTAGGCATCCATAAAATTCTGAACATATTGTAGAAACatgtaaaaatgcttaattaactccttaattattattatttttgacatttcagaccaaaattttgaaataaatgatataagaaacaca
>XM_043238901.1
CGCATACACGTGCACCGGTTCAGTTCAGCACGAAACGGGGATTTTACAACACTGCGGCAATTCCGTCTTTCCTATCGATATGACAGAAGACCGTTTTTTACATAACCTTCAGATACATGCACAGTTTTAGAGGGCGAGAATTTTAGGGATAAGCCTACAAACTGAAAAGGATAGTGGTGGCCTATACAAAGATGCTGACAGCAAACATGAATGCGATCCCACAAATAGCTCAGAAGCAACACATTTCATGCCAACTCCCTAAATGTTCCGTCACATTGTTTTCGACGGCAGATCTATAGCCCCCTCTCTTGAGAGGAACATGCACAGCTTCAATTTAGTCCAAGTACGTGGAGAACGTTATCTCCGCCACCATACACCAGACCCGCGTAGTCTCTTTCTAGTCGAATATGAGCAAGCTTTAACACAAGTAAGAGGAGTGGATCAGCGATTAGGGTGATGCGTTTAagattacaattaatttaacaacatacAGTGGCAAGCATATATAGCTCACTTTCCTACAGAAGTGGATAGTTCTAGAAGCGTTCCTGACCCTGACGGCGTGGATGCGCGAAAGATGCTGGGATGCAAGGGATCATCTGGGACCGGGGTGAGATACAAGCTGACTCTGGCTACAGGACTGCTGGAGTGCTTGTGTTTTGCCGGAGTCGTGTTTGGTTGGGCGTCTCTCGTGTTTGTCCTGAAGACAGATGGCTACTTCAGCGATTTGTGCATCAATGCAACAGACACTAATGGAAAACCTGGCACAGaCTGCGGCCTGCAAGATGAGAATTTCTCATTGGTTTTCACCGTGGCCTCCTTCATGAACAACTTTCTCACTCTGCCCAACGGATTCTTCTACGACCATTTCGGCACGATGGCAACGCGATTTTTGGCTATATTTCTTTATACCACTGGCACTCTTATTGTGGCGTTGTCCAGTAAAGCTCTCTCGATCTTGCTTTTTCCTGCTCTTTCCTTCGTAGCGGTGGGaggtattttatttctaatgacAAATATGCAGGTGGGGAACCTTTTTGACTCTCATAGATCAACAATTATTACAGTCTATAATGGGGCCTTTGACTCTTCATCAGTTATCTTTCTTATCATCAagGTGCTTTATGAGAGAGGGGTTTCTCTTCGCTCCTCATTTCTCTTCCTGTCAGCCTGTAATATCATTCATCTCCTCCGGACTCTTTTCCTTATGCCTAAATCACACATTCCCTATCCCATCACAGAAGACTACAAATATGGGCTGAGCTGTGCCAAATCACATAGCTACAACGTTGAACAGCACGAGGCAGAGCCAGAGATGAGATCAGACAGAGGCAGAGGTGTAGCTGATGAGCCACTACAGTCTGACACACTACAGCTAACAGAAAACTCTGAGAAAGACAGTTTTAAGAGCTGTGTTCTGTCCTGGTTCTTCCTGTGGCACCTCATATGGCTGTCAGTCATGCAGCTGCGCCATTATTTCTTCATTGGAACTCTGAATCCAATGCTCGACAGACTGGCAAACCAAGACCCGGACATTGTGAGTGAGTACACCAATGCGTTTGCTTTCACACAGTTCTGTGGCGTTCTCTGTGCTCCCTGGAATGGGCTGCTAATGGACAGACACAAAGGAAAGCCCCTAGATCCAGGTGTGTCAGAACGGGAAGCAGACCTGCGCTCGTCCGTTCTGTCTCTCCTCCTCACCTCTCTGCAGTGCCTGTTGTTCTCCGTCTGTGCAAGCATTCCCTTCCTCCCTCTCCAGTACCTCACGTTCATCCTTCAGGTCCTTAACCGCTCTTTTCTGTACGGAGGGAATGCTGCATTCATCAGCATAGCGTTCCCAGCTCGTCATTTTGGAAAGCTGTATGGTCTGGTGATGTCTCTATCGGCTGTGGTGTCATTGCTGCAGTATCCCTGCTTCGCCCTCAACAAAGTTCTTGAAGGAGACCCCTTCTATGTGAACATCATCTTGACTGTCCTGACTCTGCTGGCCTTCATTCATCCTGTCTATGTGTTTCGTCACTGCAGAGAGCTGGCAAAACAGCGAGAGAAttacaaactaaatatttcagaaGCCTCCATACAGGAAACAtcaatgtattaatttaaatagaCATACTTGATTAATACATATAACTGACAAAGGGAAAAATAATAAGCATTAGGTATTTAACGCAATGTTTTACCATCGTTGTATTTTAGAGATTTAAATACTTGAAAATAAGAGTTAACAGTCAGCAATTAAAttcattccattttattttaattggtaATATTTACAATCTTTATTTGTAAagtacagaaatatatatatatattttttgagttGGCAAGAACAGAAATTTAGATACAAGTATTTGTTTAAACATATTGATTAAGGAGCAAGGGGAGGTCACATGGGTGTCCGAAACATACAGATTTTTACATGGGATCTGCAAGCTCTTCCGGAGTTGTATGATATCCAGTTGCATGTTAATATCCTGTTTTCCCACAGGGAAAGCATTAACAGTCCTAAAAGCATCATACAGTTAATTCATGTCCATTCAGGGGTTTATAGCATGTTTTATACATAACGTGTGCTACAGCTAGGCATCCATAAAATTCTGAACATATTGTAGAAACatgtaaaaatgcttaattaactccttaattattattatttttgacatttcagaccaaaattttgaaataaatgatataagaaacaca

Function

symbol description
slc43a3a Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within transmembrane transport. Located in cytoplasm and nucleus. Is expressed in blood cell and vascular endothelium. Orthologous to human SLC43A3 (solute carrier family 43 member 3).

NR:

description
PREDICTED: solute carrier family 43 member 3 isoform X1

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238893.1 True 3618 mRNA 0.41 12 20406464 20413525
XM_043238901.1 False 2706 mRNA 0.43 13 20406419 20413525

Neighbor

gene id symbol gene type direction distance location
cryba1l2 cryba1l2,LOC107556821,LOC107664562,LOC107674250,LOC107551533,LOC107746552 coding upstream 51185 20351650 ~ 20355234 (+)
tmx2b tmx2b,LOC107664575,LOC107674258,LOC107556817,LOC107730509,LOC107551492 coding upstream 117796 20284242 ~ 20288623 (+)
slc43a1b slc43a1b,LOC107664571,LOC107551476,LOC107730511,LOC107674269,LOC107556815 coding upstream 125117 20269043 ~ 20281302 (+)
si:dkey-28b4.8 si:dkey-28b4.8,LOC107664566,LOC107551445,LOC107556825,LOC108434786,LOC108262771 coding upstream 141350 20244740 ~ 20265069 (+)
si:dkey-9i23.6 NA coding upstream 190680 20209054 ~ 20215739 (+)
vwa11 LOC107730535,LOC107556812,LOC107674268 coding downstream 19479 20433004 ~ 20444796 (+)
si:ch73-109d9.2 LOC107674212,LOC107746722,LOC107556810,LOC107730527,LOC107664578 coding downstream 37633 20451158 ~ 20454879 (+)
si:ch73-109d9.3 LOC107730528,LOC107551616,LOC107664580,LOC107674213,LOC107746741,LOC107556809 coding downstream 41495 20455020 ~ 20459072 (+)
si:ch73-109d9.1 LOC107556808,LOC107746687,LOC107551630,LOC107664569,LOC107730521,LOC107674214 coding downstream 47594 20461119 ~ 20470161 (+)
zgc:66472 LOC107730520,LOC107664577,LOC107551622 coding downstream 56774 20470299 ~ 20476282 (+)
LOC122345303 NA non-coding upstream 2161 20401851 ~ 20404258 (+)
G4829 NA non-coding upstream 27087 20377325 ~ 20379332 (+)
G4823 NA non-coding upstream 39836 20365859 ~ 20366583 (+)
G4817 NA non-coding upstream 52072 20353978 ~ 20354347 (+)
G4686 rgs12b,LOC107749922,LOC107679871,LOC107551217 non-coding upstream 405871 19999341 ~ 20000548 (+)
G4852 NA non-coding downstream 45974 20459499 ~ 20460183 (+)
G4853 NA non-coding downstream 46812 20460337 ~ 20460568 (+)
G4976 NA non-coding downstream 306754 20720279 ~ 20721036 (+)
G4984 ctnna2 non-coding downstream 514772 20928297 ~ 20930642 (+)
G4991 NA non-coding downstream 603695 21017220 ~ 21020726 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other upstream 163070 20241818 ~ 20243349 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other upstream 260563 20142461 ~ 20145856 (+)
scoca scoca,scoc,LOC107671340,LOC107712029,LOC107674238,LOC107737083,LOC107556533 other upstream 629369 19715553 ~ 19777050 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other upstream 884020 19521084 ~ 19522399 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other upstream 2121775 18247250 ~ 18284644 (+)
LOC122348864 ctnna2,LOC107706127 other downstream 907937 21321462 ~ 21361440 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other downstream 1177352 21590877 ~ 21620592 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other downstream 1218690 21632215 ~ 21635052 (+)
LOC122348949 LOC107676845,LOC107560973,LOC107718848,LOC107692180,LOC107603005,LOC107746297,LOC107735984 other downstream 2427163 22840688 ~ 22851393 (+)
G5559 epc1a,LOC107568137,LOC107654560,LOC107753261,LOC107653121,LOC107582192,LOC107706605 other downstream 3129539 23543064 ~ 23554625 (+)

Expression


Co-expression Network