tmx2b (tmx2b,LOC107664575,LOC107674258,LOC107556817,LOC107730509,LOC107551492)


Basic Information

Item Value
gene id tmx2b
gene name tmx2b,LOC107664575,LOC107674258,LOC107556817,LOC107730509,LOC107551492
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20284242 ~ 20288623 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043238986.1
CTCTGTCCCTTTAAATCGTTTAATTCATTTGCCGACGAATATTGTTTCGCGTTGATAGCGGCATCGATGCGGAGTCTGCCGTCTCGGATCACCGCAGAACTCGttttctaaaactaaaaaagaacaATGGCTTTATTAACACCCCTCTTCGCGTTTCTGTATCATTTGCCGCAGGTTTACAAATGGCTACTAAAGCCGTACTACATCGCCTCGTTATTTATGTCTATCGCGTTCCTGCTTGTCCGCAAAACGCCTGGGATCTGCGAACATCTTTCGACGCAGCGCGAGGATGGCAATTCATGCGATTTTGACTGGagagagGTGGAGATACTGATGTTTTTAAGTGCTATAGTCATGATGAAGAACAGAAGAGCAATTACCATCGAGCAGCACGTGGGCAACATCATCCTCTTTTGTAAAGTGGCCAATGTGATCCTCTTCTTCAGACTGGACATACGTTTGGGGCTTCTCTATTTGACGTTGTGTATAGTTTTCCTGATGACCTGTAAACCTCCTCTCTACATGGGCCCTGAATACATCAAGTACTTCAGCGATAAAACCATTGATgatGAGTTGGAGAAGGATAATAGAGTGACCTGGATCGTGGAGTTTTTTGCTAACTGGTCACCAGAGTGTCAGTCTTTCGCATCTGTCTATGCTGATCTGTCCTTGAAGTATAACTGTGCAGGACTGAAATTTGGCAAAGTGGACATTGGTCGTTACAGTGAAGTGTCCAAAAAGTACAGGGTCAGCACCTCTCCTCTCTCCAAGCAGCTGCCCTCTCTGGTGCTCTTCCAGGGGGGAAAGGAAATCATGAGGCGCCCTCAAGTGGACAAAAAGGGACGGGCAGTGTCTTGGACCTTCACAGAGGAAAACATCATCCGGGAGTTTAACCTCAACGAGCTGTATCAGAAGTCAAAGAAGCTTGGTAAGACCAAAGGAGAGAAGTTCGAGAGGCCCAACGAGTCTGTGTTTTCCCCCGTGCCTGAGGAGGAGGAGCCGGAGGCCGAGACCATCACCGCGATGGACACAGAGAGCAAGAAGGACAAATAGGAAGCGCATGCTGCTGAAGAGCACTGTGAATCACTATGGGACTGGAGCAGGATGTGCTGATGTTCAGtatgcagagagaaagagtttgTACCGAGATATAAACGGAATGATTGTgctcttgtttctttttgtataaCATATTAATTAAGTGCAAAATGAGTCCAATAATATAGTAAATCCTTATGTTAATACctatttaaatgtcataatcATTGATAAACTGGACACAGATGTTCAAACAGCTGTTATTTGGGACATTAATATCAGTCTGTCAGccgtttttaatttaatcaaggTGAACATGGGACATCTACCTCTAATATGGTGATCATTAGTAAGGGGTTATTTTGCGTTGCATATGCATCGCATCGGGGAACAaactttttatcatttatttttctcttgtaTTGTTAATCCTCCCATTCCATTGTCACTCctagtattttctttttctagatttttttttactattttactaagATGTGGCTTGGTTGTGTGACGGTACGGACTACTAGACCGAACGCGGCGGTCCTAAAAGAGTGGGCCtttaacatttcatgttttgaaCATTTACTGTTTCTAAGAGCAAGACCTCAAGATAATATTCTGTAAAATTCAGTTGTTACTTTTTGACATTTAGATCCAGTTACACTTTAATTTCAGAGAGAATATACTGCTGTAAAAgtcttgaatgttttttttttatattaagcttattttcattttctttgtgctAAAGGATTATTTAACAATTGTATTCTAAACCGACAGGCACAGAAGAAAGCTGCAGGCAGTCTTCACGTATTAACCTTTTCCAATCATTACctttaatttgtttgtgtggaagcttgaattttttttttccacaaaaagcTAAATTGTTTTAGTTCCCTCTCGAGTAAACCGAGTCTTGATTTTTCACTAATCTTTAATGAACTGATGTCTGAAAGATGATGAAGTGCTTTAAGTGGTTGTGAACAGAAGGGTTTTCGCCATTCCAATAAAACACTTTGTTCTTCACA

Function

symbol description
tmx2b Predicted to enable disulfide oxidoreductase activity. Predicted to be involved in brain development. Predicted to be located in endoplasmic reticulum membrane and mitochondrial membrane. Predicted to be integral component of membrane. Predicted to be active in membrane-bounded organelle. Orthologous to human TMX2 (thioredoxin related transmembrane protein 2).

NR:

description
PREDICTED: thioredoxin-related transmembrane protein 2-B

GO:

id name namespace
GO:0045454 cell redox homeostasis biological_process
GO:0016021 integral component of membrane cellular_component

KEGG:

id description
K25112 TMX2; thioredoxin-related transmembrane protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043238986.1 True 2075 mRNA 0.41 8 20284242 20288623

Neighbor

gene id symbol gene type direction distance location
slc43a1b slc43a1b,LOC107664571,LOC107551476,LOC107730511,LOC107674269,LOC107556815 coding upstream 2940 20269043 ~ 20281302 (+)
si:dkey-28b4.8 si:dkey-28b4.8,LOC107664566,LOC107551445,LOC107556825,LOC108434786,LOC108262771 coding upstream 19173 20244740 ~ 20265069 (+)
si:dkey-9i23.6 NA coding upstream 68503 20209054 ~ 20215739 (+)
si:dkey-9i23.8 LOC107679872,LOC107749759,LOC107556828,LOC107552182 coding upstream 76111 20203335 ~ 20208131 (+)
tcirg1a tcirg1a,LOC107679885,LOC107749787,LOC107551357 coding upstream 110656 20163529 ~ 20173586 (+)
cryba1l2 cryba1l2,LOC107556821,LOC107664562,LOC107674250,LOC107551533,LOC107746552 coding downstream 63027 20351650 ~ 20355234 (+)
slc43a3a slc43a3a,LOC107746630,LOC107674217,LOC107730523,LOC107664567,LOC107551582 coding downstream 117796 20406419 ~ 20413525 (+)
vwa11 LOC107730535,LOC107556812,LOC107674268 coding downstream 144381 20433004 ~ 20444796 (+)
si:ch73-109d9.2 LOC107674212,LOC107746722,LOC107556810,LOC107730527,LOC107664578 coding downstream 162535 20451158 ~ 20454879 (+)
si:ch73-109d9.3 LOC107730528,LOC107551616,LOC107664580,LOC107674213,LOC107746741,LOC107556809 coding downstream 166397 20455020 ~ 20459072 (+)
G4686 rgs12b,LOC107749922,LOC107679871,LOC107551217 non-coding upstream 283694 19999341 ~ 20000548 (+)
G4680 NA non-coding upstream 299261 19984725 ~ 19984981 (+)
G4679 dok7,LOC107552150,LOC107749932,LOC107679881,LOC107674231 non-coding upstream 301115 19982804 ~ 19983127 (+)
G4678 dok7,LOC107714234,LOC107674231,LOC107679881,LOC107749932 non-coding upstream 303620 19978969 ~ 19980622 (+)
G4677 dok7,LOC107749932,LOC107674231,LOC107552150,LOC107714234,LOC107679881 non-coding upstream 311977 19970776 ~ 19972265 (+)
G4817 NA non-coding downstream 65355 20353978 ~ 20354347 (+)
G4820 NA non-coding downstream 69317 20357940 ~ 20417720 (+)
G4823 NA non-coding downstream 77236 20365859 ~ 20366583 (+)
G4829 NA non-coding downstream 88702 20377325 ~ 20379332 (+)
LOC122345303 NA non-coding downstream 113228 20401851 ~ 20404258 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other upstream 40893 20241818 ~ 20243349 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other upstream 138386 20142461 ~ 20145856 (+)
scoca scoca,scoc,LOC107671340,LOC107712029,LOC107674238,LOC107737083,LOC107556533 other upstream 507192 19715553 ~ 19777050 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other upstream 761843 19521084 ~ 19522399 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other upstream 1999598 18247250 ~ 18284644 (+)
LOC122348864 ctnna2,LOC107706127 other downstream 1032839 21321462 ~ 21361440 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other downstream 1302254 21590877 ~ 21620592 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other downstream 1343592 21632215 ~ 21635052 (+)
LOC122348949 LOC107676845,LOC107560973,LOC107718848,LOC107692180,LOC107603005,LOC107746297,LOC107735984 other downstream 2552065 22840688 ~ 22851393 (+)
G5559 epc1a,LOC107568137,LOC107654560,LOC107753261,LOC107653121,LOC107582192,LOC107706605 other downstream 3254441 23543064 ~ 23554625 (+)

Expression


Co-expression Network