med19b (med19b,med19,LOC107551486,LOC107730510,LOC103047628,LOC108412480)


Basic Information

Item Value
gene id med19b
gene name med19b,med19,LOC107551486,LOC107730510,LOC103047628,LOC108412480
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20281288 ~ 20283889 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239001.1
TCCCCAAGCAACCGGAAGCAGTTGTGAACGGATCGTCGTTCTGCAGTGTCAAGCCGAGACAACTGTCCACGCAATAATAACGTCGTGGCGTAATTTTGCCATCATGACAGAAATCTTCTCTTCTCTGTATGGTCAGCCTGATTCACAGGGTCCAGCAGGGCCCTCTGCGCTTGGCTTTGGATCTGGGAAACCCCAGGGACCCCAAAATATGGGCCCGATGTGTTTCCCGCATCAGATGGTGGATGAAGGGGGTCCGATCAGAAAACCCACAGCAATGAACGAGCCCTTCTACCTGCTGCGAGAACTACCCATGGAGAACGAGCTGACAGGACACACTAATCTCATCACACACTACAACCTGGAACACGCTTATAACAAGTTCTGCGGAAAGAAGGTGAAAGAGAAGCTCAGCAACTTCCTTCCTGAGCTGCCTGGTATGATCGACAGCCCAGGCATTCAGGACAACAGCTCTCTGCGATCTCTCATCGAGAAGCCACCAGTTTGCAACAACTCGTTCAGTCCTCTCACTGGGGCCATGCTCACCGGCTTCAGGCTGCACACTGGccctCTACCAGAGCAGTACAGGCTGATGCACATTCAACCAccaaagaagaagaacaaacacAAGCATAAACACCATCGGCCTCAAGATCCCTTACCACCAGAAACTCCGTCAGATTCAGAccataagaagaagaagaaaaagaaggatgATGAcccagacagaaagaaaaagaagaaagataagaagaagaaaaagAATCGCCATAGCCCTGACCACCCGGGCATGACTGGAGCTCAGCCCAGCAGCAGCAGTCTGAGATAAAAACCAGAGGAACGAGATGAAGAGAAGCACAATCTGGAAAATTGGGCCTTTTCTGGGACGCTACAGATTTAATGTTACAGTGACTCagatgcgtgtgtgtatatataaatgtgtgagaGTATATCATTATGTAATGTACCAGAACGCCTGGTCAACATCACATCTGTTATATTTGTAAGTGCCTCTGTGTCTATTTATGAGTATAATAATGAATTTTTCATTCaacctttttaaaaacctttttttacaaataaaacagtcAGCTGAGAAATGGGCTGATTTGtgagaaaa

Function

symbol description
med19b Predicted to enable transcription coregulator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to act upstream of or within regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of mediator complex. Orthologous to human MED19 (mediator complex subunit 19).
med19 Predicted to enable transcription coregulator activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be part of mediator complex.

NR:

description
PREDICTED: mediator of RNA polymerase II transcription subunit 19-B

GO:

id name namespace
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0016592 mediator complex cellular_component

KEGG:

id description
K15137 MED19; mediator of RNA polymerase II transcription subunit 19

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239001.1 True 1117 mRNA 0.47 6 20281288 20283889

Neighbor

gene id symbol gene type direction distance location
ssrp1b ssrp1,ssrp1b,LOC107746478,LOC107664573,LOC107674244 coding downstream 39434 20230590 ~ 20241854 (-)
p2rx3b p2rx3b,p2rx3,LOC107746906,LOC107674197,LOC107664541 coding downstream 52941 20223700 ~ 20228347 (-)
LOC122345237 NA coding downstream 62645 20217197 ~ 20218643 (-)
tmem187 tmem187,LOC107749980,LOC107679875,LOC107674198,LOC107746454 coding downstream 71595 20208263 ~ 20209693 (-)
ndufs8a ndufs8a,ndufs8,LOC107679876,LOC107746464,LOC107674223,LOC108434795,LOC106602580 coding downstream 81793 20196170 ~ 20199495 (-)
rtn4rl2a rtn4rl2a,rtn4rl2,LOC107746539,LOC107674267,LOC107556816,LOC107551512 coding upstream 43222 20327111 ~ 20331588 (-)
crybb1l2 crybb1l2,LOC107551523,LOC107674249,LOC107730514,LOC107556820,LOC107746545,LOC107664576 coding upstream 61066 20344955 ~ 20348750 (-)
unc93b1 unc93b1,LOC107730513,LOC107664560,LOC107746565,LOC107674251 coding upstream 71346 20355235 ~ 20366551 (-)
LOC122344866 NA coding upstream 85642 20369531 ~ 20376584 (-)
ctnnd1 ctnnd1,LOC107664559,LOC107746596,LOC107674216,LOC107730519 coding upstream 93428 20377317 ~ 20401716 (-)
LOC122345304 NA non-coding downstream 15105 20265285 ~ 20266183 (-)
G4870 NA non-coding downstream 16219 20199995 ~ 20265069 (-)
LOC122345298 NA non-coding downstream 123765 20155664 ~ 20157523 (-)
G4713 NA non-coding downstream 342887 19938019 ~ 19938401 (-)
G4671 NA non-coding downstream 344529 19936390 ~ 19936759 (-)
G4924 LOC107556812,LOC107674268,LOC107730535,LOC107552263 non-coding upstream 159063 20442952 ~ 20444794 (-)
G4930 NA non-coding upstream 175652 20459541 ~ 20460184 (-)
G4934 NA non-coding upstream 182273 20466162 ~ 20469015 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding upstream 330027 20613916 ~ 20702298 (-)
LOC122349798 NA non-coding upstream 419587 20703476 ~ 20718890 (-)
si:dkey-9i23.16 NA other downstream 140709 20137035 ~ 20140579 (-)
cdk2ap2 cdk2ap2,LOC107684972 other downstream 742142 19535964 ~ 19539146 (-)
znf827 znf827,LOC107550613,LOC107684451,LOC107742547 other downstream 2400871 17811459 ~ 17880417 (-)
smad1 smad1,LOC107684445,LOC107734580 other downstream 2516556 17745837 ~ 17764732 (-)
LOC122330431 lsm6 other downstream 2844581 17434717 ~ 17436707 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other upstream 5428 20289317 ~ 20312948 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other upstream 83240 20367129 ~ 20369111 (-)
G4958 NA other upstream 399953 20683842 ~ 20686740 (-)
ctnna2 ctnna2,LOC107689479 other upstream 622281 20906170 ~ 21410571 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other upstream 1265728 21549617 ~ 21564077 (-)

Expression


Co-expression Network