tmem176 (LOC107679884,LOC107749825)


Basic Information

Item Value
gene id tmem176
gene name LOC107679884,LOC107749825
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20139791 ~ 20141733 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043239168.1
GAAGGATGACTTTGACTGTGTCGACGGACCTCTCAGTGAACACTAGCCCAACTCAGGTAGAGGAAAAACTGgaagacaaacaaaaagctCTGAGGGAAAGCATCGAGAAGGGGGAGCCCAAAATATTCGGGgTCGCCCAGATAGTAATTGGACTGATGATCATCTCTTATTCTCTTCCTCTGCTCTCCTGTGAGAGGACAATTACACTTAACTTTGGCGTGCCGTGGTGGAGTGGCCTTATGtttGTCATTTCAGGCGCAACTGCAATAGCATTGGAAAAACATGCCAACTTGAAAGCAGTCTCTGTTTGTTTGGCGATCTCTTCTGTGACCATTATCATCTCAGTTATTGCACTTATCCTATACTATGCTGATGTTGCTCTCAATTCGGCAACCAAATGCAATGAGCGACAACACCAGACATGTGACAACCAGTACTTTGCCACTcaTTTCAGCATGGGATTGAAGACAACCATCTCCATGGTCTGTATGGTCCAGACAGCAATGTCCTCTGCTTTTACAGCTATTCTGTATAATCAGAAGAAGAAATTTACAGGTTATGGGACCATAGCTGAATCACATCCTGCATAATCCCAGGACATTTCTGGATTTAAATCAGAGGTCCACTATCCACTTCATATAGCCTTAATGTCTGTTTTCTTGTTGTATTGTACAAGTGTTGTtgtatttacagtttaatgtgaattgtatacttttatataaataagcaATATAAGCATGTAAAGATtgtccttttttaaataaaaaaaatttagtttacatttaaa

Function

NR:

description
membrane-spanning 4-domains subfamily A member 12-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043239168.1 True 787 mRNA 0.40 6 20139791 20141733

Neighbor

gene id symbol gene type direction distance location
trnak-cuu NA coding upstream 27277 20112442 ~ 20112514 (+)
si:ch211-89o9.6 LOC107749865,LOC107714238,LOC107551277,LOC107674264,LOC107551252 coding upstream 27553 20106848 ~ 20112238 (+)
dok1a LOC107750021,LOC107551292,LOC107556522,LOC107714239,LOC107679877,LOC107674236,LOC107552160 coding upstream 33059 20102024 ~ 20106732 (+)
paip2b paip2b,LOC107551309,LOC107674237,LOC103039606,LOC108263850,LOC105904045,LOC108426126 coding upstream 38737 20097771 ~ 20101054 (+)
si:ch211-89o9.4 LOC107679878,LOC107750040 coding upstream 43636 20088728 ~ 20096155 (+)
tmem109 LOC107679866,LOC107750001,LOC107552630,LOC107674242 coding downstream 4290 20146023 ~ 20148155 (+)
tcirg1a tcirg1a,LOC107679885,LOC107749787,LOC107551357 coding downstream 21796 20163529 ~ 20173586 (+)
si:dkey-9i23.8 LOC107679872,LOC107749759,LOC107556828,LOC107552182 coding downstream 61602 20203335 ~ 20208131 (+)
si:dkey-9i23.6 NA coding downstream 67321 20209054 ~ 20215739 (+)
si:dkey-28b4.8 si:dkey-28b4.8,LOC107664566,LOC107551445,LOC107556825,LOC108434786,LOC108262771 coding downstream 103007 20244740 ~ 20265069 (+)
G4686 rgs12b,LOC107749922,LOC107679871,LOC107551217 non-coding upstream 139243 19999341 ~ 20000548 (+)
G4680 NA non-coding upstream 154810 19984725 ~ 19984981 (+)
G4679 dok7,LOC107552150,LOC107749932,LOC107679881,LOC107674231 non-coding upstream 156664 19982804 ~ 19983127 (+)
G4678 dok7,LOC107714234,LOC107674231,LOC107679881,LOC107749932 non-coding upstream 159169 19978969 ~ 19980622 (+)
G4677 dok7,LOC107749932,LOC107674231,LOC107552150,LOC107714234,LOC107679881 non-coding upstream 167526 19970776 ~ 19972265 (+)
G4817 NA non-coding downstream 212245 20353978 ~ 20354347 (+)
G4820 NA non-coding downstream 216207 20357940 ~ 20417720 (+)
G4823 NA non-coding downstream 224126 20365859 ~ 20366583 (+)
G4829 NA non-coding downstream 235592 20377325 ~ 20379332 (+)
LOC122345303 NA non-coding downstream 260118 20401851 ~ 20404258 (+)
scoca scoca,scoc,LOC107671340,LOC107712029,LOC107674238,LOC107737083,LOC107556533 other upstream 362741 19715553 ~ 19777050 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other upstream 617392 19521084 ~ 19522399 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other upstream 1855147 18247250 ~ 18284644 (+)
lsm6 lsm6 other upstream 2241245 17896535 ~ 17898546 (+)
gab1 gab1,LOC107725185,LOC107734574,LOC107684448 other upstream 2529046 17551473 ~ 17610745 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other downstream 728 20142461 ~ 20145856 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other downstream 100085 20241818 ~ 20243349 (+)
LOC122348864 ctnna2,LOC107706127 other downstream 1179729 21321462 ~ 21361440 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other downstream 1449144 21590877 ~ 21620592 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other downstream 1490482 21632215 ~ 21635052 (+)

Expression


Co-expression Network