mxd4 (mxd4,LOC107695376,LOC107714650,LOC107757594,LOC107700283)


Basic Information

Item Value
gene id mxd4
gene name mxd4,LOC107695376,LOC107714650,LOC107757594,LOC107700283
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14832703 ~ 14843409 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240244.1
CTGCATTAATTTTTGTCGAGAGTCTCTACGACTCAGAATTGAACTGTCCACATCGAGCGtcatcactttttttgtttgtttgtttgttttgttttgttttgtttcctccctTTGTTTTACACCATTTGTTAAACAGTGTTCAACacgtttttatattattttttatttctgtaaatacaCCGGAATGGAACTTAATTCTCTTCTACTTCTTCTTGAGGCAGCAGAGTATTTGGAAAGAAGAGACAGagAAGCTGAACACGGTTACGCGTCCGTTTTGCCGTACGACAGCGACTTTTCCAGAAAGAAAACCAAATCCTCTCCCATTTCAAGAAAAAACCACAACAATAGGTCATCACACAATGAGCTGGAAAAACACAGACGTGCCAAACTGCGATTGTACCTGGAGCAGTTGAAACAGCTTGTGCCTTTGGGTCCTGATAGCACCCGTCACACCACACTGAGCCTGCTCAAACGCGCCAAAATGCACATCAAGAAGCTGGAGGAACAGGACAGGAAGGCTCTAAACATGAAGGAGCAACTGCAGAGAGAACATCGCTACCTCAAACGGCGCCTGGAGCAGCTCTCTGTACAGGGCTTAGAGCGCATTCGCACTGACAGCATGGGCTCCACCATCTCCACTGACTCTGAGCAAGAAGTGGATGTGGACATAGAGGGCGTGGAGTTCACACCAGGTGAGGGTGATAGCGTGGACAGTGTTAGCGATGGCGAGGACCACTACAGCCTGCAGAGCAGCTCCAGCGATGGAGGCCACATTTCACATTCCCACAGATTACAGGCTCACATCTGCTAGGCCGTGTCAGACCGCAACAGTGTGTCACCTCCAACATACCCATCCGCCACTCCCAGCTGGCAGGAAGCACCTGGGTGATTCCACTCCTCAGAAAACTCTCTCCCCTCTAAACCCTCGCAACGCTTTGTATCAAACCCTCCCTAACcccaca

Function

symbol description
mxd4 Predicted to enable protein dimerization activity. Is expressed in head mesenchyme; notochord; pronephric duct; and pronephric mesoderm. Orthologous to human MXD4 (MAX dimerization protein 4).

NR:

description
PREDICTED: max dimerization protein 4

GO: NA

KEGG:

id description
K09114 MXD, MAD; MAX dimerization protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240244.1 True 962 mRNA 0.48 6 14832703 14843409

Neighbor

gene id symbol gene type direction distance location
fabp2 fabp2,LOC107714631,LOC107572697,LOC107598258,LOC107700317,LOC107695844,LOC107757591 coding upstream 169602 14661658 ~ 14663101 (+)
gucy1b1 gucy1b3,LOC107714654,LOC107757623 coding upstream 173166 14644013 ~ 14659537 (+)
gucy1a1 gucy1a3,LOC107695445,LOC107572203,LOC107700279,LOC107598251 coding upstream 189464 14635220 ~ 14643239 (+)
si:dkey-30k22.5 LOC107695853,LOC107572196 coding upstream 225306 14605452 ~ 14607397 (+)
plrg1 plrg1,LOC107757621,LOC107695461,LOC107700313 coding upstream 243939 14583650 ~ 14588764 (+)
ndufb6 ndufb6 coding downstream 4604 14848013 ~ 14849671 (+)
toporsa topors,LOC107695355,LOC107700322 coding downstream 6751 14850160 ~ 14853910 (+)
LOC122348129 mtap,LOC107595051,LOC107714626,LOC107700323,LOC107598256,LOC107757575,LOC102313215 coding downstream 10801 14854210 ~ 14861916 (+)
tet2 LOC107714646,LOC107695330,LOC107595052,LOC107598249,LOC107700324,LOC107757629 coding downstream 95328 14938737 ~ 14959108 (+)
arhgef38 arhgef38,LOC107695304,LOC107714644,LOC107700325,LOC107757628 coding downstream 123025 14966434 ~ 14976255 (+)
G3394 NA non-coding upstream 20560 14749316 ~ 14812143 (+)
G3391 gpank1,LOC107700266 non-coding upstream 22982 14745709 ~ 14809721 (+)
G3384 NA non-coding upstream 49864 14716000 ~ 14782839 (+)
G3374 NA non-coding upstream 58026 14681459 ~ 14774677 (+)
G3370 NA non-coding upstream 153759 14672314 ~ 14678944 (+)
G3381 LOC107714625,LOC107695349,LOC107595098 non-coding downstream 19203 14862612 ~ 14869892 (+)
G3432 NA non-coding downstream 182301 15025710 ~ 15029067 (+)
G3443 NA non-coding downstream 193870 15037279 ~ 15037670 (+)
G3431 NA non-coding downstream 219842 15063251 ~ 15114948 (+)
LOC122350773 NA non-coding downstream 601779 15445188 ~ 15446124 (+)
G3380 LOC107572695,LOC107695836 other upstream 40915 14723545 ~ 14791788 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other upstream 220026 14610244 ~ 14612677 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other upstream 228815 14602312 ~ 14603888 (+)
LOC122345399 NA other upstream 351357 14480198 ~ 14481346 (+)
G3187 gatb,LOC107695556,LOC107695902 other upstream 714270 14114431 ~ 14118433 (+)
hemgn hemgn,trmo other downstream 187535 15030944 ~ 15034800 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other downstream 335194 15178603 ~ 15317624 (+)
G3599 NA other downstream 634689 15478098 ~ 15498680 (+)
G3647 NA other downstream 809684 15653093 ~ 15653381 (+)
LOC122348759 raph1b,LOC107654246,LOC107707841,LOC107719733,LOC107705038 other downstream 1220862 16064271 ~ 16069915 (+)

Expression


Co-expression Network