cplx2l (cplx2l,LOC107692605,LOC107723185,LOC107665962,LOC107758899,LOC108241424,LOC103366469,LOC107390991)


Basic Information

Item Value
gene id cplx2l
gene name cplx2l,LOC107692605,LOC107723185,LOC107665962,LOC107758899,LOC108241424,LOC103366469,LOC107390991
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7762381 ~ 7770526 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240938.1
GATCCCTCCATCTTTCGTTCTCCAGGTCTGAGAGCATCTGTTACACGAAGCTCCCAGCAGTAGCGGAGGGATCAGGTGCTAAGCACTGGCAGAGGCGTGTTTCCCGCCCGGCACCTCCAATCAATCGCTCCTCTCTCCGGCTGGGGACGTGGGATGTTTTGATGGAAAAAGGCTGCGTGTGATGCACAGGGCTTTCACCGTCTTGCGTTCCGGCTGCAGTTCCCCTGGCCAACGCTCTGACAGGCGCTGGGCGAGCAGGAAGAGACGCCTGGAGATTCGGGGATGCTCATAGCGGGTTAATAATACACATCCTCACACAACTGGCCCACGTCAACTTCCCCGTCGGCGCGATTGCCCGCTTCCTCCGCGGACCCCGAGCAGATTTGGCTGGACGATCTCTGCTCTCATACGTTTGAAGTGCCAAGTACAAGGACGGGAACACTTGAAAAGCCATCATGAATTTCCTGCTGAAGGCAGCTTTGGGAGGAGGCCCTCCTGATGTTGGTAAAATGctgggaggagaggaggagaaagatcctgaagcagaaaaagagaaagaagaagaaagacaggAAGCTCtgagacaggaagaggaagagaggaaggCCAAACACGCCAAGATGGAAGCAGAGCGGGAAGCCATAAGACAGGGCATCAGGGACAAGTATGGCATCAAGAAGCGCGAGGAGGCCGAAGCGGAGGCGCAGGCGGCGATGGAGCAGGCGAGCGAAGGCAGTCTGACCCGTCCAAAGAAAGCGGTACCGTCCGGCTGCGGAGACGACGAGGAGGAGGAAAACATCATGGACACGGTGATGAAGTATCTACCCGGCCCGCTGCAGGACATGCTGAAGAAGTAgttccctaaaaaaaaaaatctcaagcACACGCAGctttagatattattttaacGTGTGCTGACTTCGGAGAGAAGAGAGCGCACTAGAGCAAAACACCGACTACACCATTTACCTTTCACACATTTCAATCCGCGAGGAGCTTTAGATATTAGCGACAGatcaaaatcaatcaatcaatcgagCAGGAGGGGTTAATTATCAGAATATAAGCCATATTTTATCTTTACAGGGAAACCTGACTCACGACATCTCTTCGGCAGTTATTTCTTATTCAATACGTAAACAGCaatatatatgcatgaattGTTCGAGTGTCTATTCCACTGTTTTGTATCACCAATCGATAAGGTTTTCCACGTTCATTTAGCGATCgatatgaggaaaaaaaaaaatacttggtTGAAGACATTCTGGTCTTTGCATGTGTCCATAGTGTTCGTGTGCTCACCGCCATCTTGTTTTTGTCGCTGCAGAGATTGCAATCAGATAAAGAAGGCAATAACATTCTCCCACGCTGTAAGCTAAATGACAACTACTTTGTACGTTTGTCGCTACGCCATTTAGTTCATTCTGGCAAACTCTGTCACAGATGCACTGTAGTTTCATCGGTCTGGAACATTCAATGCCTCAATTGAGTTCAACAGTGTTGTCGAGACTGCGTTCTCGCACCGTTTTTGTGCTTTACGACAGATTCTGAATTTACGAAGATTTCTGATTTTAAGATTGAAACTCAGTTTCACAGGGACGCTCTGTGTTTCGAATGGACTGTAATTTCTCTGGTTTAGGGCCAGGGGGAATTTTCGTCTGTGGTCTACAACATTCTCAGCAATAATAACGTATTCTGTTCGCTTGGCTTGCAGTAAAACGAAATAAAATCGTAAGAGTGTATGAATGGCtctgatgattaaaaaaaaatgatgataatgTCAAAGGTATGTCTGTCTTGAGATCTGTTGGGTATATGGAATTGTAATAAACCAATCACACATATCTTTTTTGGTGTTTCGATACTAAAATATAGCAATTAACggaattaaaatattcaaagagAAAA
>XM_043240939.1
CACCAAGACTACTGAGGTCGGAACGAAAACACTTTGCGGAGATCCTTGGGCCATATGACTAAATAGAGCGTCCTGGACCGGATTAAGAAAGTCATTGGTCGATAAGTCCAAAGTTACCTTCTGGATCTCTGACCCCCGGAAGTTGATAGATTTGGCTGGACGATCTCTGCTCTCATACGTTTGAAGTGCCAAGTACAAGGACGGGAACACTTGAAAAGCCATCATGAATTTCCTGCTGAAGGCAGCTTTGGGAGGAGGCCCTCCTGATGTTGGTAAAATGctgggaggagaggaggagaaagatcctgaagcagaaaaagagaaagaagaagaaagacaggAAGCTCtgagacaggaagaggaagagaggaaggCCAAACACGCCAAGATGGAAGCAGAGCGGGAAGCCATAAGACAGGGCATCAGGGACAAGTATGGCATCAAGAAGCGCGAGGAGGCCGAAGCGGAGGCGCAGGCGGCGATGGAGCAGGCGAGCGAAGGCAGTCTGACCCGTCCAAAGAAAGCGGTACCGTCCGGCTGCGGAGACGACGAGGAGGAGGAAAACATCATGGACACGGTGATGAAGTATCTACCCGGCCCGCTGCAGGACATGCTGAAGAAGTAgttccctaaaaaaaaaaatctcaagcACACGCAGctttagatattattttaacGTGTGCTGACTTCGGAGAGAAGAGAGCGCACTAGAGCAAAACACCGACTACACCATTTACCTTTCACACATTTCAATCCGCGAGGAGCTTTAGATATTAGCGACAGatcaaaatcaatcaatcaatcgagCAGGAGGGGTTAATTATCAGAATATAAGCCATATTTTATCTTTACAGGGAAACCTGACTCACGACATCTCTTCGGCAGTTATTTCTTATTCAATACGTAAACAGCaatatatatgcatgaattGTTCGAGTGTCTATTCCACTGTTTTGTATCACCAATCGATAAGGTTTTCCACGTTCATTTAGCGATCgatatgaggaaaaaaaaaaatacttggtTGAAGACATTCTGGTCTTTGCATGTGTCCATAGTGTTCGTGTGCTCACCGCCATCTTGTTTTTGTCGCTGCAGAGATTGCAATCAGATAAAGAAGGCAATAACATTCTCCCACGCTGTAAGCTAAATGACAACTACTTTGTACGTTTGTCGCTACGCCATTTAGTTCATTCTGGCAAACTCTGTCACAGATGCACTGTAGTTTCATCGGTCTGGAACATTCAATGCCTCAATTGAGTTCAACAGTGTTGTCGAGACTGCGTTCTCGCACCGTTTTTGTGCTTTACGACAGATTCTGAATTTACGAAGATTTCTGATTTTAAGATTGAAACTCAGTTTCACAGGGACGCTCTGTGTTTCGAATGGACTGTAATTTCTCTGGTTTAGGGCCAGGGGGAATTTTCGTCTGTGGTCTACAACATTCTCAGCAATAATAACGTATTCTGTTCGCTTGGCTTGCAGTAAAACGAAATAAAATCGTAAGAGTGTATGAATGGCtctgatgattaaaaaaaaatgatgataatgTCAAAGGTATGTCTGTCTTGAGATCTGTTGGGTATATGGAATTGTAATAAACCAATCACACATATCTTTTTTGGTGTTTCGATACTAAAATATAGCAATTAACggaattaaaatattcaaagagAAAA
>XM_043240940.1
ACACCGCATTTCTcacggctgctgctgctgctggaggtGCGAGGGGCGCGAGCAGGTGCTGTCCGGCGAAGGTGGTGCTGAAAGCGGCTCGTGCGCTAGATAGAGCCGAGCCTTTGCGGCGGGGGTTCAAGTAAGATTTGGCTGGACGATCTCTGCTCTCATACGTTTGAAGTGCCAAGTACAAGGACGGGAACACTTGAAAAGCCATCATGAATTTCCTGCTGAAGGCAGCTTTGGGAGGAGGCCCTCCTGATGTTGGTAAAATGctgggaggagaggaggagaaagatcctgaagcagaaaaagagaaagaagaagaaagacaggAAGCTCtgagacaggaagaggaagagaggaaggCCAAACACGCCAAGATGGAAGCAGAGCGGGAAGCCATAAGACAGGGCATCAGGGACAAGTATGGCATCAAGAAGCGCGAGGAGGCCGAAGCGGAGGCGCAGGCGGCGATGGAGCAGGCGAGCGAAGGCAGTCTGACCCGTCCAAAGAAAGCGGTACCGTCCGGCTGCGGAGACGACGAGGAGGAGGAAAACATCATGGACACGGTGATGAAGTATCTACCCGGCCCGCTGCAGGACATGCTGAAGAAGTAgttccctaaaaaaaaaaatctcaagcACACGCAGctttagatattattttaacGTGTGCTGACTTCGGAGAGAAGAGAGCGCACTAGAGCAAAACACCGACTACACCATTTACCTTTCACACATTTCAATCCGCGAGGAGCTTTAGATATTAGCGACAGatcaaaatcaatcaatcaatcgagCAGGAGGGGTTAATTATCAGAATATAAGCCATATTTTATCTTTACAGGGAAACCTGACTCACGACATCTCTTCGGCAGTTATTTCTTATTCAATACGTAAACAGCaatatatatgcatgaattGTTCGAGTGTCTATTCCACTGTTTTGTATCACCAATCGATAAGGTTTTCCACGTTCATTTAGCGATCgatatgaggaaaaaaaaaaatacttggtTGAAGACATTCTGGTCTTTGCATGTGTCCATAGTGTTCGTGTGCTCACCGCCATCTTGTTTTTGTCGCTGCAGAGATTGCAATCAGATAAAGAAGGCAATAACATTCTCCCACGCTGTAAGCTAAATGACAACTACTTTGTACGTTTGTCGCTACGCCATTTAGTTCATTCTGGCAAACTCTGTCACAGATGCACTGTAGTTTCATCGGTCTGGAACATTCAATGCCTCAATTGAGTTCAACAGTGTTGTCGAGACTGCGTTCTCGCACCGTTTTTGTGCTTTACGACAGATTCTGAATTTACGAAGATTTCTGATTTTAAGATTGAAACTCAGTTTCACAGGGACGCTCTGTGTTTCGAATGGACTGTAATTTCTCTGGTTTAGGGCCAGGGGGAATTTTCGTCTGTGGTCTACAACATTCTCAGCAATAATAACGTATTCTGTTCGCTTGGCTTGCAGTAAAACGAAATAAAATCGTAAGAGTGTATGAATGGCtctgatgattaaaaaaaaatgatgataatgTCAAAGGTATGTCTGTCTTGAGATCTGTTGGGTATATGGAATTGTAATAAACCAATCACACATATCTTTTTTGGTGTTTCGATACTAAAATATAGCAATTAACggaattaaaatattcaaagagAAAA
>XM_043240941.1
AAGATCCCTCCATCTTTCGTTCTCCAGGTCTGAGAGCATCTGTTACACGAAGCTCCCAGCAGTAGCGGAGGGATCAGGTGCTAAGCACTGGCAGAGGCGTGTTTCCCGCCCGGCACCTCCAATCAATCGCTCCTCTCTCCGGCTGGGGACGTGGGATGTTTTGATGGAAAAAGGCTGCGTGTGATGCACAGGGCTTTCACCGTCTTGCGTTCCGGCTGCAGTTCCCCTGGCCAACGCTCTGACAGGCGCTGGGCGAGCAGGAAGAGACGCCTGGAGATTCGGGGATGCTCATAGCGGGTTAATAATACACATCCTCACACAACTGGCCCACGTCAACTTCCCCGTCGGCGCGATTGCCCGCTTCCTCCGCGGACCCCGAGCAGTGTTCGTTTTGTTTGCAGATTTGGCTGGACGATCTCTGCTCTCATACGTTTGAAGTGCCAAGTACAAGGACGGGAACACTTGAAAAGCCATCATGAATTTCCTGCTGAAGGCAGCTTTGGGAGGAGGCCCTCCTGATGTTGGTAAAATGctgggaggagaggaggagaaagatcctgaagcagaaaaagagaaagaagaagaaagacaggAAGCTCtgagacaggaagaggaagagaggaaggCCAAACACGCCAAGATGGAAGCAGAGCGGGAAGCCATAAGACAGGGCATCAGGGACAAGTATGGCATCAAGAAGCGCGAGGAGGCCGAAGCGGAGGCGCAGGCGGCGATGGAGCAGGCGAGCGAAGGCAGTCTGACCCGTCCAAAGAAAGCGGTACCGTCCGGCTGCGGAGACGACGAGGAGGAGGAAAACATCATGGACACGGTGATGAAGTATCTACCCGGCCCGCTGCAGGACATGCTGAAGAAGTAgttccctaaaaaaaaaaatctcaagcACACGCAGctttagatattattttaacGTGTGCTGACTTCGGAGAGAAGAGAGCGCACTAGAGCAAAACACCGACTACACCATTTACCTTTCACACATTTCAATCCGCGAGGAGCTTTAGATATTAGCGACAGatcaaaatcaatcaatcaatcgagCAGGAGGGGTTAATTATCAGAATATAAGCCATATTTTATCTTTACAGGGAAACCTGACTCACGACATCTCTTCGGCAGTTATTTCTTATTCAATACGTAAACAGCaatatatatgcatgaattGTTCGAGTGTCTATTCCACTGTTTTGTATCACCAATCGATAAGGTTTTCCACGTTCATTTAGCGATCgatatgaggaaaaaaaaaaatacttggtTGAAGACATTCTGGTCTTTGCATGTGTCCATAGTGTTCGTGTGCTCACCGCCATCTTGTTTTTGTCGCTGCAGAGATTGCAATCAGATAAAGAAGGCAATAACATTCTCCCACGCTGTAAGCTAAATGACAACTACTTTGTACGTTTGTCGCTACGCCATTTAGTTCATTCTGGCAAACTCTGTCACAGATGCACTGTAGTTTCATCGGTCTGGAACATTCAATGCCTCAATTGAGTTCAACAGTGTTGTCGAGACTGCGTTCTCGCACCGTTTTTGTGCTTTACGACAGATTCTGAATTTACGAAGATTTCTGATTTTAAGATTGAAACTCAGTTTCACAGGGACGCTCTGTGTTTCGAATGGACTGTAATTTCTCTGGTTTAGGGCCAGGGGGAATTTTCGTCTGTGGTCTACAACATTCTCAGCAATAATAACGTATTCTGTTCGCTTGGCTTGCAGTAAAACGAAATAAAATCGTAAGAGTGTATGAATGGCtctgatgattaaaaaaaaatgatgataatgTCAAAGGTATGTCTGTCTTGAGATCTGTTGGGTATATGGAATTGTAATAAACCAATCACACATATCTTTTTTGGTGTTTCGATACTAAAATATAGCAATTAACggaattaaaatattcaaagagAAAA

Function

symbol description
cplx2l Predicted to enable SNARE binding activity. Predicted to be involved in regulation of neurotransmitter secretion and synaptic vesicle exocytosis. Predicted to act upstream of or within exocytosis and neurotransmitter transport. Predicted to be located in synapse. Predicted to be part of SNARE complex. Predicted to be active in terminal bouton. Is expressed in nervous system; neurons; and retina. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 63. Orthologous to human CPLX1 (complexin 1).

NR:

description
PREDICTED: complexin-1-like

GO:

id name namespace
GO:0006836 neurotransmitter transport biological_process
GO:0019905 syntaxin binding molecular_function

KEGG:

id description
K15294 CPLX1_2; complexin-1/2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240938.1 False 1911 mRNA 0.46 4 7762381 7770524
XM_043240939.1 False 1679 mRNA 0.43 4 7762381 7769996
XM_043240940.1 False 1665 mRNA 0.45 4 7762381 7770137
XM_043240941.1 True 1931 mRNA 0.46 4 7762381 7770526

Neighbor

gene id symbol gene type direction distance location
b4galt1 LOC107692709,LOC107565367,LOC107758898,LOC107665944,LOC107557953,LOC108277608 coding downstream 32641 7722102 ~ 7729740 (-)
LOC122352459 mtp,LOC107557955,LOC107723195,LOC107564103,LOC107692610,LOC107665974 coding downstream 45056 7706885 ~ 7717325 (-)
pla2g12a LOC107692613,LOC107564125,LOC107665940,LOC107758864,LOC107557937 coding downstream 75526 7684099 ~ 7686855 (-)
grk4 grk4,LOC107665967,LOC107723186,LOC107692618,LOC107758889 coding downstream 113787 7624106 ~ 7648594 (-)
iqce iqce,LOC107723199,LOC107692619,LOC107665963,LOC107758887 coding downstream 146081 7607639 ~ 7616300 (-)
sclt1 sclt1,LOC107692600,LOC107665924,LOC107683335 coding upstream 35166 7805692 ~ 7818399 (-)
pcdh18a LOC107751534,LOC107692598,LOC107564003,LOC107746447,LOC107557554 coding upstream 401811 8172337 ~ 8179576 (-)
elf2b elf2b,LOC107692595,LOC107702304,LOC107742505,LOC107714223,LOC107562959 coding upstream 702293 8472819 ~ 8490055 (-)
camk2d2 camk2d2,LOC107714220,LOC107563926,LOC107742503,LOC107702309,LOC107562980,LOC103354871,LOC108246882 coding upstream 795627 8566153 ~ 8598509 (-)
pde5aa LOC107692592,LOC107563895 coding upstream 838562 8609088 ~ 8622357 (-)
G1781 NA non-coding downstream 101849 7656078 ~ 7660532 (-)
G1663 NA non-coding downstream 446063 7315910 ~ 7316318 (-)
G1660 knstrn,LOC107723170,LOC107564216,LOC107758858,LOC107586895 non-coding downstream 449483 7312252 ~ 7312898 (-)
LOC122341717 NA non-coding downstream 464236 7297494 ~ 7298145 (-)
G1632 NA non-coding downstream 609901 7150285 ~ 7152480 (-)
G1845 pcdh10a,LOC107751533,LOC107665923,LOC107557555 non-coding upstream 182687 7953213 ~ 7984303 (-)
LOC122341751 NA non-coding upstream 304649 8075175 ~ 8077387 (-)
G1868 NA non-coding upstream 367957 8138483 ~ 8167387 (-)
LOC122351284 NA non-coding upstream 676022 8446548 ~ 8448624 (-)
G2010 NA non-coding upstream 860938 8631464 ~ 8634397 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other downstream 466552 7204004 ~ 7295829 (-)
G1642 NA other downstream 592359 7125642 ~ 7170022 (-)
trpc5a trpc5a,LOC107564287,LOC107692628,LOC107758875,LOC107590730,LOC108439362 other downstream 628099 7071589 ~ 7134282 (-)
LOC122342514 NA other downstream 1217823 6533501 ~ 6544558 (-)
gaa2 si:ch73-12o23.1,LOC107725392,LOC107692649,LOC107722961,LOC107590719,LOC107565173,LOC107702495 other downstream 1294127 6456044 ~ 6468254 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other upstream 721618 8492144 ~ 8500212 (-)
G1926 NA other upstream 785514 8556040 ~ 8607795 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other upstream 1008686 8779212 ~ 8798355 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 2586655 10357181 ~ 10401686 (-)
LOC122347930 dnah6,LOC106610484 other upstream 2964444 10734970 ~ 10799609 (-)

Expression


Co-expression Network