si:ch211-243a20.4


Basic Information

Item Value
gene id si:ch211-243a20.4
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22132862 ~ 22136035 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043240991.1
TCTGTTGTGTAATATGGCTTAACTTCCTGCGTGGTTTGGACAGAAAGCAGTTGTTTACCACTTTGTTTCTGAGCTTTGATGAAACAACAGAGCAAAAGAAAAGGCGGCTCcatttgtttcaaatgaaaggaaatgtaaattttgttCAAGGATGCATGCAGCCAAGTCTGTCCTGTGTTGGATCGTAATTCTGTGCTGCTTGCCGGAAACTCTAGCCAAACTTCAACTCTCCATGCCGGACAGAACCAGAGTGGCACTAGCTGGGGAAAGTCTTTACTTCAATCTGTCGGTTTCAGTCCCGGCAAACTACACCACTAGCAAGCTTATAtgctacaataaaaacaagacgAGTGTTTGGaataaagatattaaaagtACGTTTTACCAAGCTACACAAACGGTGGAGGTGAATATCAGCATGCACAATAGCTCCAGTTCTGGAAATTACTACTTTAGTTATGCAAAACAGGAGGTGCATTGGGTGGTTCATGTGAGAGATAAAGGTTATGAAGAGCCGCCTGAGGAGTTAAACAGTGCCATCATCACAATGATGGCATTCTCGGGAATCCTTCTCATCTTCACTGTAGCTGGGTCACTTTACATATTAAAGAACTACAAGaaacagCCTCCTCGTAGAGAAGACAATAATGATGTTGCAGTGACGACACCAAGGGAGAGTGATGAAGTGATTTTGGATGAAGATGCTGCATCTGCATCATTCTACACAACTCTACAATGCAGATCAGGCTCTATTTATGATACTCTGCATTCAGACTCAATTCATGTAGAAAACGCAAAGAAGAACCAATCAGAAAaggaCTGCAACGCACAAGAAGATGTATTTGATTCTGTGTATGAAAACCTGTGAATGAAGGAATACGTGtcaaatgaagattttttttgtataagttaatattttatggCCCAGTATGAccgaaaataaatgaaagatcaaaacaaa

Function

GO: NA

KEGG:

id description
ko05150 Staphylococcus aureus infection
ko05140 Leishmaniasis
ko05323 Rheumatoid arthritis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043240991.1 True 961 mRNA 0.40 6 22132862 22136035

Neighbor

gene id symbol gene type direction distance location
f8a zgc:101679,LOC107551875,LOC107676892,LOC107712230,LOC107692150,LOC107603023,LOC107718725,LOC108428241 coding downstream 132 22128343 ~ 22132730 (-)
si:ch73-90k17.1 NA coding downstream 10013 22119346 ~ 22122849 (-)
LOC122347503 LOC107712219,LOC107552443 coding downstream 14785 22111512 ~ 22118077 (-)
ddx39aa LOC107676896,LOC107551870,LOC107603018,LOC107692155,LOC107712218,LOC106587357 coding downstream 60318 22068065 ~ 22072544 (-)
zgc:111983 NA coding downstream 181708 21946861 ~ 21951154 (-)
grin2bb grin2bb,grin2b,LOC107676879,LOC107551907,LOC107692185,LOC107603025,LOC108258482 coding upstream 10175 22146210 ~ 22235522 (-)
LOC122348711 atf7ip,LOC107712238,LOC107676868,LOC107692147 coding upstream 104346 22240381 ~ 22270734 (-)
serhl serhl2,LOC107603032,LOC107718629,LOC107692145,LOC107561867 coding upstream 152647 22288682 ~ 22293361 (-)
c1h19orf67 LOC107712227,LOC107676872,LOC107561872 coding upstream 196939 22332974 ~ 22336292 (-)
pnpla6 pnpla6,LOC107712242,LOC107676850,LOC107718547,LOC107692140 coding upstream 249478 22385513 ~ 22411698 (-)
G5327 NA non-coding downstream 88725 22043902 ~ 22044137 (-)
G5047 NA non-coding downstream 512281 21612918 ~ 21620581 (-)
LOC122349798 NA non-coding downstream 1413972 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 1430564 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1663847 20466162 ~ 20469015 (-)
G5366 NA non-coding upstream 212479 22348514 ~ 22382972 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 276427 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 298578 22434613 ~ 22438354 (-)
G5369 LOC107746262 non-coding upstream 308923 22444958 ~ 22446648 (-)
G5404 NA non-coding upstream 390081 22526116 ~ 22526422 (-)
LOC122348907 NA other downstream 333118 21761881 ~ 21799744 (-)
G5108 NA other downstream 360100 21724387 ~ 21772762 (-)
G5104 NA other downstream 366578 21718139 ~ 21766284 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other downstream 568785 21549617 ~ 21564077 (-)
ctnna2 ctnna2,LOC107689479 other downstream 722291 20906170 ~ 21410571 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other upstream 123404 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other upstream 136783 22272818 ~ 22287521 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other upstream 403649 22539684 ~ 22602648 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other upstream 728796 22864831 ~ 22903414 (-)
G5468 cbr1,LOC107746284,LOC107560976,LOC107692178 other upstream 777865 22913900 ~ 22916405 (-)

Expression


Co-expression Network