rasd3 (zgc:152698,LOC107565554,LOC107692726)


Basic Information

Item Value
gene id rasd3
gene name zgc:152698,LOC107565554,LOC107692726
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 6288730 ~ 6292181 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242291.1
GGAGCAGTAGGTTTAGGGCTCGGATTCAACAACTGTTTTCTCTGTCTCATCGCTGTATTAACAGTGAAGTAGATTAAATATTAGCTTGCCTACTAACCTCAGCAGAAATCACTGAATAATTTCAAAAACGACTACAAAGTCTACAACACGGAAACCCACGCGTCGCGTCATTCGCGTTTCCATTGGCTGCATCCAGTAGGACGTAGGACGCGCGCAGACTACGAACTTAACAATTGAAGCGATGTCTTTGCTGGTGCGGGATCGTCGGACGGTGCGCTTTGTGTTTTTGGGCGCCGCCGGGGTTGGAAAAACCGCCCTGATCACCCGTTTCTTGCAAGATCGCTTCGACTTCAAATACACGCGCACCGTGGAGGAGCTTCACGCTCTTGAGTACGACACAGACGGCGAGAGGGTGCGCATTGAGATCTTGGACACGAGCGGCAGTTATTCCTTCCCAGCCATGCGCGCTTTGTGCATCCGAACCGGGGACGCGTTTGCGCTCGTGTACGCCGCAGACCAGCCAGACTCCCTGGAGGAGGCGCAGCGGCTCCGCGAGGAGATCCTGGAGGTGAAGGGAGAGAAGTTTACTGGAATCACGGTGATTGAGAACAAAGCGGACCTGGGCAGCCGGGGTCGCCAGGCCACTGCGGAGGTGATGCGCGCGGTGGAGGAGGACTGGGGCGCGGGCTTTGTGGAGACTTCTGCGCGCACCGGAGAGAACGTCAACGGCGTGTTTCGGGACTTGCTTCAACAGATGAAGTTACCGAGCCGCGTGAGCCCGGCACTGCGCAGACGAACGCAGACAATGAGCAGAGAACTTACGGAGACGCGGAAAAAGCCCCCGTTGAAGAAGAACAACAGCTGTATCTTGTCTTAATAGACATTCGCGTGATATTATAGTTGTGCATCATACTGATGCTTAAGTGGTCTGGATCAGTAGACTCCACAGATATGTTGGACAGTTTTAATGAGACTGAATGGGTCTGATGCATTATCATAATCATTAAAGAGGTTTTTGCCTATGTTTGATCTCGTTAAATGAGAGCCAAAGTGTTATTTTATGAgggaataaatgcaaatgatgttCT

Function

NR:

description
PREDICTED: GTP-binding protein Rhes-like

GO:

id name namespace
GO:0007264 small GTPase mediated signal transduction biological_process
GO:0006184 obsolete GTP catabolic process biological_process
GO:0016020 membrane cellular_component
GO:0005525 GTP binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242291.1 True 1088 mRNA 0.52 3 6288730 6292181

Neighbor

gene id symbol gene type direction distance location
cacng3a cacng3,LOC107590766 coding upstream 21229 6262422 ~ 6267501 (+)
prkcba prkcb,LOC107722959,LOC107702530 coding upstream 27982 6233036 ~ 6260748 (+)
tlr2 tlr2,LOC107590711,LOC107722930 coding upstream 57548 6226398 ~ 6231182 (+)
zgc:77849 zgc:77849,LOC107722949,LOC103038624,LOC107692663,LOC107564565,LOC108439082,LOC107702534,LOC107590708 coding upstream 175205 6107861 ~ 6113525 (+)
fscn1b fscn1,fscn1b,LOC107692665,LOC107564588,LOC107722932,LOC107590764,LOC107702511 coding upstream 188900 6094349 ~ 6099830 (+)
plk1 plk1,LOC107722962,LOC107590713,LOC107702528 coding downstream 2568 6294749 ~ 6299522 (+)
chtf18 chtf18,LOC107692658,LOC107702521,LOC107722946,LOC107725360 coding downstream 21789 6313970 ~ 6327004 (+)
uncx4.1 uncx4.1,LOC107725405,LOC107564450,LOC107692652,LOC107722947,LOC107702525,LOC107590715 coding downstream 65647 6357828 ~ 6362500 (+)
elfn1b elfn1b,LOC107564393,LOC107714143,LOC107692646,LOC107722936,LOC107590768,LOC107702506 coding downstream 187955 6480136 ~ 6619283 (+)
LOC122348963 elfn1b,LOC107692646,LOC107714143,LOC107564393,LOC107722936,LOC107590768,LOC107702506 coding downstream 383216 6675397 ~ 6693693 (+)
G1301 NA non-coding upstream 8099 6279217 ~ 6280631 (+)
G1292 NA non-coding upstream 11442 6227292 ~ 6277288 (+)
G1287 socs1b,LOC107725357,LOC107692730,LOC107577529,LOC107590765 non-coding upstream 67334 6219924 ~ 6221396 (+)
G1206 NA non-coding upstream 173449 6114964 ~ 6115281 (+)
G1201 NA non-coding upstream 197573 6090845 ~ 6091157 (+)
G1332 LOC107692651,LOC107725361,LOC107590714,LOC107722945,LOC107702522 non-coding downstream 39895 6332076 ~ 6345567 (+)
G1348 NA non-coding downstream 108211 6400392 ~ 6400757 (+)
G1357 NA non-coding downstream 144773 6436954 ~ 6437177 (+)
G1358 NA non-coding downstream 145627 6437808 ~ 6443476 (+)
G1360 NA non-coding downstream 150376 6442557 ~ 6442860 (+)
G1318 NA other upstream 1532 6285858 ~ 6287198 (+)
G1183 actb,actb1,LOC102799139,LOC107581721,LOC103039558 other upstream 201075 6057404 ~ 6087655 (+)
G1168 LOC107725347,LOC107565259,LOC107701771 other upstream 407596 5879460 ~ 5881134 (+)
hecw2b hecw2,LOC107674007,LOC107676038,LOC108258347,LOC107706834 other upstream 1262816 4979125 ~ 5025914 (+)
gtf3c3 gtf3c3,LOC107706835,LOC107750061 other upstream 1311467 4967186 ~ 4977263 (+)
G1414 NA other downstream 241321 6533502 ~ 6536957 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other downstream 419454 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other downstream 479305 6771486 ~ 6782141 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other downstream 554319 6846500 ~ 6860270 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other downstream 854692 7146873 ~ 7152220 (+)

Expression


Co-expression Network