LOC122347503 (LOC107712219,LOC107552443)


Basic Information

Item Value
gene id LOC122347503
gene name LOC107712219,LOC107552443
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22111512 ~ 22118077 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043242858.1
TTTACAACTCTGTCGACACCGGATGCGACAAGTGTCGCGACGCAACAGCTTCCTTAATACTAAGAATACAAAGTTCAAACGTCCATTTGTTGTTTAATCTGCATTTCAGTGTACTTTTGAAAACTTAAACGATCCAAACAAAAAACGAGCGTCACGCCATTGACCCACATACAGGTGGTCTAGATTAATATGTTGATTACACTCGCTGCTTTTTCGTGCGAAATTGGTGCACGTGTGAGGTAAACGGCAAACTGGCTATGTCTTTCGAactaaaaacattcatttcagttttaatgttaTCAGAAATAGCACTTAATATCAACTGTCGGTCTTTTAGCGCTACGCCTGAGCGGGAAGGCGTTATTCATTCCGGAGAAAGTCGTTTCAGTAAAGCGTTGTACAATTATGGCCCAAAGACTGTATTTTCACGACAATACCAAAGCGGTGCGTTGGATCTCCAAGCGTCGAGTTCGAATGTAAAGCGCTTTCGACGCGCGAGTTCAAAACATGCGGATTTTCCCTATAGAAATAAGAATGAAACCCTGCCTCTGCCGTCGAATAAACACGTGAATGAATTTCGATCCAACTATAGTGCATATATACTTCCTGCAACTGAAAACACTACTCTCACAAATTTTCACAAAAGAGCTTTTGAAATTGAAGATGGTTTTCAAAGCGACGACTCAGCATTTAGGAGAGAAGCAGTCTCTGGGAAAATGTATGTTCCTCAAAGTGGGTCTAGCTCCCAATCCAAATCTTTGTGGCTGGTAGTACCCATGGTACACTGTTCAGAAGCGGTAATGACATTAACAGCTGCTGGAAgagaatacacacacatcttCGTGAAAAGAGcgGATGCAGCCCCACTGCCTTTATTCCAGGTGCCTGCATATTGTGGTTATTCTGTCAGGGTCACATGGGAAGATCTGGTCCTAATGGCCCCGTATGATGGGTGCTACATCACACAAGAGAATGGCAGTTATGTGCTTTCACTGCTGTGGTGGGACAGTCCCATAAAGATATCCTGTCCTGTGACGCCCGTGATCTCACTACCGTCTCCTTCTGTCCTGTGCTCTCAATCTGGCATGGTCATCGCAATAGAAGGTGCCCAAGAAGCTGCAGATAAACACAAGGTTAAAGTGAATGGGAAAATACTGCCTCTTCTTTCTGAGACATGTGCGTATCGCCTACATTCTCCGTCTGACATTGTGCTACTTCATACTGTTTTCAGCTCAAGATGTGTGACTGTTAAGGATGAAGAAAACACTCTTGTCATCATCTTGGATGGAAAGCAGTTCACCCTCTCTTGTCCATTTCCTCCCTACCTGTCTCAGTCTCTTCCTTACCTTAATTTTTATCCATTTCATCAACTACTACAGCCCAATCAAGAGCTAGTGCCTTTTATCCCACATCTTCCTGTTTTACCCCAATACCCCATCATGCCCCCTCCACAATATTCACCGTACCCTGTATCCTGTCCCCCTTATCCCGAGAGATTCTGTTCTCAGTCCCCATACCATCATCCCTCCCCCGCCATGACCACTGCTCCCAAACCAACCATCCAGCCATTGCCATGGACATCATTTCCTCAACCCACATACAATCCTCGGACCCTTCCGGTTACGCAGTCGACCCTGCTCCCTCAGCTACCTGTCTTTTCTCCAACTCCTCCTGCTCAGACCCTCAAGATGTCTCCATCTCTTAATTGCATGAgcaataaattaattgtaactTTGCCCTTAGCAAGAGCGGACTCCATTAAAGTCAAAGatgcGAGCACAAATACTTGGATCTCCATTGCGTCTGTCCCTGTAGACTGTAATTACACACTTCACTCCAGAGGTGGCAGTGTAGTGCTCTCTTCACCACTGCCTTCCtgccacacacaaaaaatgTCCTCCACAGTGATCTATCTAACCGTCAGGTTCTGGGATCTCTCTCAACTGCGATACCGAACCCTACAGCTTCAGTGTCACCACACCGGAGATATAGGCACACAACCTACAGTACCTCCTACTACAATCGAACCTTTGCACCAAAGTATTCCTCACCTTACACCCACACCCACACTCGCACGCCCACCCCCTGAATTTCAGCTGCTGTGTTCTAGCCAGCATATGAGCATAAAACTGCCACCTGGACCAACATCTGGCATCTTTGTACAAGccCCCAATGGGACAAACACAGAAGCGGTTCCTATTTTGGAGGCCCCAAGTCATTGTGGGTACTCTGTAAAAAGGGGCAAAGATGGTACCATCAATATCCTACTGCCTTACTCTTCCTGTCACATGACTCAGAAGGACGGGCTGTTcagaattatattaaaatatcagatGCCAAAGAGGCGCACAGTTGAGTCAATGCTGGAGTGTCAGGCGTTTATTAGTCAAGAGTGCAACGTTGCAGCTGATCAGCAGCTGGTCTGTGGATCTGGGCCGTTATCATCATCAGAGTGCCATGATAGAGGCTGCTGTTATTCTACAGACTCCCAGTCATGTTATTACCCCATGGACGAATGCACGATGGATaggcattttgttttcttggtgCACTCATCCGCCGCTGATCCACCTCTATCCCCCGCCAGCCTCGTCACAGCTGGTGACAACTCCTGCACACCCCAGAAAGTGACTGCTGACATTGCCCTCTTCAAGATCCCTCTGGATGAATGTGGGGTGCACAGATTTGAGGTGGGTAAGATGGTCATATATATGGTGGAGATCCTGAATAAAGTGCAGCCCCTCAGTCTGAATTATGGCACCATCACTAGAGAGTCACCTGTAAGGCTACTGGTTGAGTGTCGCTATTCACCCGGATCTGTGGTAAGTGTGGGTTATCTGGTGAAAAGCCCCTCTCTTGGACCGTCTATCAAAGCTCAGGGGGTGTTTGGAGTTCAGCTCAGAATCGCAAAAGATGAACACTACAACGATTATTACCCACAATACCACCAGCCCCTGCATATGCTGCTGGGGAGACCCCTTTACCTGGAAGTGCGTCTGTTAAATCCTCCAGATCCCACTGCTATGCTGCTGGTGCATTACTGTGTTGCGTACCCACGCTCTGCCAAATCTGCCTGGATCCTTATTTATGATGGgtgCCCAAATTTCCTTGACCAGACCCCAACCCACAAGCCTCCTCCTACTCCGGCCGAGGCCCTGATCAATCATGTTAGACGATTCACAATCACTACATTCCAGTTCCTGTCTGAAGATGCCAATGTGCAGACAGACGAGGAGatttattttatgtgttcGACTGAGGTTTGTCTGCCCTCAGATGGTCCATGTGTTGAGGGCTGCTTTGTGGGTGAGTGTCAGCCGTTGCACTTCATTCCCACAGTATGCAATTACAGCCACAGTTTATGGTTTATAAATCTGACTCATATCTACTACAGTCTTACTTAGAGCACCTGTTTTACaatcatttgtacatttttactgGTTGCATTTCATTCACCTTCACTTTTTCCAGATCCCATTAACACGAAGCCCTGAGAGAAGGCTGATGAGCTGGATGAAGCCCAGCTAATAAATccattgttctttttgttttgacagATGCACGCTCTTTATAGCAATTCCAAAACAATAAAGCTTTGAAAGCCA
>XM_043242867.1
TTTACAACTCTGTCGACACCGGATGCGACAAGTGTCGCGACGCAACAGCTTCCTTAATACTAAGAATACAAAGTTCAAACGTCCATTTGTTGTTTAATCTGCATTTCAGTGTACTTTTGAAAACTTAAACGATCCAAACAAAAAACGAGCGTCACGCCATTGACCCACATACAGGTGGTCTAGATTAATATGTTGATTACACTCGCTGCTTTTTCGTGCGAAATTGGTGCACGTGTGAGGTAAACGGCAAACTGGCTATGTCTTTCGAactaaaaacattcatttcagttttaatgttaTCAGAAATAGCACTTAATATCAACTGTCGGTCTTTTAGCGCTACGCCTGAGCGGGAAGGCGTTATTCATTCCGGAGAAAGTCGTTTCAGTAAAGCGTTGTACAATTATGGCCCAAAGACTGTATTTTCACGACAATACCAAAGCGGTGCGTTGGATCTCCAAGCGTCGAGTTCGAATGTAAAGCGCTTTCGACGCGCGAGTTCAAAACATGCGGATTTTCCCTATAGAAATAAGAATGAAACCCTGCCTCTGCCGTCGAATAAACACGTGAATGAATTTCGATCCAACTATAGTGCATATATACTTCCTGCAACTGAAAACACTACTCTCACAAATTTTCACAAAAGAGCTTTTGAAATTGAAGATGGTTTTCAAAGCGACGACTCAGCATTTAGGAGAGAAGCAGTCTCTGGGAAAATGTATGTTCCTCAAAGTGGGTCTAGCTCCCAATCCAAATCTTTGTGGCTGGTAGTACCCATGGTACACTGTTCAGAAGCGGTAATGACATTAACAGCTGCTGGAAgagaatacacacacatcttCGTGAAAAGAGcgGATGCAGCCCCACTGCCTTTATTCCAGGTGCCTGCATATTGTGGTTATTCTGTCAGGGTCACATGGGAAGATCTGGTCCTAATGGCCCCGTATGATGGGTGCTACATCACACAAGAGAATGGCAGTTATGTGCTTTCACTGCTGTGGTGGGACAGTCCCATAAAGATATCCTGTCCTGTGACGCCCGTGATCTCACTACCGTCTCCTTCTGTCCTGTGCTCTCAATCTGGCATGGTCATCGCAATAGAAGGTGCCCAAGAAGCTGCAGATAAACACAAGGTTAAAGTGAATGGGAAAATACTGCCTCTTCTTTCTGAGACATGTGCGTATCGCCTACATTCTCCGTCTGACATTGTGCTACTTCATACTGTTTTCAGCTCAAGATGTGTGACTGTTAAGGATGAAGAAAACACTCTTGTCATCATCTTGGATGGAAAGCAGTTCACCCTCTCTTGTCCATTTCCTCCCTACCTGTCTCAGTCTCTTCCTTACCTTAATTTTTATCCATTTCATCAACTACTACAGCCCAATCAAGAGCTAGTGCCTTTTATCCCACATCTTCCTGTTTTACCCCAATACCCCATCATGCCCCCTCCACAATATTCACCGTACCCTGTATCCTGTCCCCCTTATCCCGAGAGATTCTGTTCTCAGTCCCCATACCATCATCCCTCCCCCGCCATGACCACTGCTCCCAAACCAACCATCCAGCCATTGCCATGGACATCATTTCCTCAACCCACATACAATCCTCGGACCCTTCCGGTTACGCAGTCGACCCTGCTCCCTCAGCTACCTGTCTTTTCTCCAACTCCTCCTGCTCAGACCCTCAAGATGTCTCCATCTCTTAATTGCATGAgcaataaattaattgtaactTTGCCCTTAGCAAGAGCGGACTCCATTAAAGTCAAAGatgcGAGCACAAATACTTGGATCTCCATTGCGTCTGTCCCTGTAGACTGTAATTACACACTTCACTCCAGAGGTGGCAGTGTAGTGCTCTCTTCACCACTGCCTTCCtgccacacacaaaaaatgTCCTCCACAGTGATCTATCTAACCGTCAGGTTCTGGGATCTCTCTCAACTGCGATACCGAACCCTACAGCTTCAGTGTCACCACACCGGAGATATAGGCACACAACCTACAGTACCTCCTACTACAATCGAACCTTTGCACCAAAGTATTCCTCACCTTACACCCACACCCACACTCGCACGCCCACCCCCTGAATTTCAGCTGCTGTGTTCTAGCCAGCATATGAGCATAAAACTGCCACCTGGACCAACATCTGGCATCTTTGTACAAGccCCCAATGGGACAAACACAGAAGCGGTTCCTATTTTGGAGGCCCCAAGTCATTGTGGGTACTCTGTAAAAAGGGGCAAAGATGGTACCATCAATATCCTACTGCCTTACTCTTCCTGTCACATGACTCAGAAGGACGGGCTGTTcagaattatattaaaatatcagatGCCAAAGAGGCGCACAGTTGAGTCAATGCTGGAGTGTCAGGCGTTTATTAGTCAAGAGTGCAACGTTGCAGCTGATCAGCAGCTGGTCTGTGGATCTGGGCCGTTATCATCATCAGAGTGCCATGATAGAGGCTGCTGTTATTCTACAGACTCCCAGTCATGTTATTACCCCATGGACGAATGCACGATGGATaggcattttgttttcttggtgCACTCATCCGCCGCTGATCCACCTCTATCCCCCGCCAGCCTCGTCACAGCTGGTGACAACTCCTGCACACCCCAGAAAGTGACTGCTGACATTGCCCTCTTCAAGATCCCTCTGGATGAATGTGGGGTGCACAGATTTGAGGTGGGTAAGATGGTCATATATATGGTGGAGATCCTGAATAAAGTGCAGCCCCTCAGTCTGAATTATGGCACCATCACTAGAGAGTCACCTGTAAGGCTACTGGTTGAGTGTCGCTATTCACCCGGATCTGTGGTAAGTGTGGGTTATCTGGTGAAAAGCCCCTCTCTTGGACCGTCTATCAAAGCTCAGGGGGTGTTTGGAGTTCAGCTCAGAATCGCAAAAGATGAACACTACAACGATTATTACCCACAATACCACCAGCCCCTGCATATGCTGCTGGGGAGACCCCTTTACCTGGAAGTGCGTCTGTTAAATCCTCCAGATCCCACTGCTATGCTGCTGGTGCATTACTGTGTTGCGTACCCACGCTCTGCCAAATCTGCCTGGATCCTTATTTATGATGGgtgCCCAAATTTCCTTGACCAGACCCCAACCCACAAGCCTCCTCCTACTCCGGCCGAGGCCCTGATCAATCATGTTAGACGATTCACAATCACTACATTCCAGTTCCTGTCTGAAGATGCCAATGTGCAGACAGACGAGGAGatttattttatgtgttcGACTGAGGTTTGTCTGCCCTCAGATGGTCCATGTGTTGAGGGCTGCTTTGTGGATCCCATTAACACGAAGCCCTGAGAGAAGGCTGATGAGCTGGATGAAGCCCAGCTAATAAATccattgttctttttgttttgacagATGCACGCTCTTTATAGCAATTCCAAAACAATAAAGCTTTGAAAGCCA

Function

NR:

description
PREDICTED: zona pellucida sperm-binding protein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043242858.1 True 3605 mRNA 0.46 17 22111512 22118077
XM_043242867.1 False 3440 mRNA 0.47 18 22111512 22118077

Neighbor

gene id symbol gene type direction distance location
ddx39aa LOC107676896,LOC107551870,LOC107603018,LOC107692155,LOC107712218,LOC106587357 coding downstream 38968 22068065 ~ 22072544 (-)
zgc:111983 NA coding downstream 160358 21946861 ~ 21951154 (-)
LOC122345057 NA coding downstream 204957 21905701 ~ 21906555 (-)
rps6 rps6,LOC107551827,LOC107603014,LOC107720314,LOC107676127,LOC107746729 coding downstream 206361 21901467 ~ 21905151 (-)
smu1b smu1b,LOC107720315,LOC107692159,LOC107746727,LOC107551820,LOC108431794 coding downstream 210986 21890352 ~ 21900526 (-)
si:ch73-90k17.1 NA coding upstream 1269 22119346 ~ 22122849 (-)
f8a zgc:101679,LOC107551875,LOC107676892,LOC107712230,LOC107692150,LOC107603023,LOC107718725,LOC108428241 coding upstream 10266 22128343 ~ 22132730 (-)
si:ch211-243a20.4 NA coding upstream 14785 22132862 ~ 22136035 (-)
grin2bb grin2bb,grin2b,LOC107676879,LOC107551907,LOC107692185,LOC107603025,LOC108258482 coding upstream 28133 22146210 ~ 22235522 (-)
LOC122348711 atf7ip,LOC107712238,LOC107676868,LOC107692147 coding upstream 122304 22240381 ~ 22270734 (-)
G5327 NA non-coding downstream 67375 22043902 ~ 22044137 (-)
G5047 NA non-coding downstream 490931 21612918 ~ 21620581 (-)
LOC122349798 NA non-coding downstream 1392622 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 1409214 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1642497 20466162 ~ 20469015 (-)
G5366 NA non-coding upstream 230437 22348514 ~ 22382972 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 294385 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 316536 22434613 ~ 22438354 (-)
G5369 LOC107746262 non-coding upstream 326881 22444958 ~ 22446648 (-)
G5404 NA non-coding upstream 408039 22526116 ~ 22526422 (-)
LOC122348907 NA other downstream 311768 21761881 ~ 21799744 (-)
G5108 NA other downstream 338750 21724387 ~ 21772762 (-)
G5104 NA other downstream 345228 21718139 ~ 21766284 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other downstream 547435 21549617 ~ 21564077 (-)
ctnna2 ctnna2,LOC107689479 other downstream 700941 20906170 ~ 21410571 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other upstream 141362 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other upstream 154741 22272818 ~ 22287521 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other upstream 421607 22539684 ~ 22602648 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other upstream 746754 22864831 ~ 22903414 (-)
G5468 cbr1,LOC107746284,LOC107560976,LOC107692178 other upstream 795823 22913900 ~ 22916405 (-)

Expression


Co-expression Network