slc25a4 (slc25a4,LOC107656452,LOC107562743)


Basic Information

Item Value
gene id slc25a4
gene name slc25a4,LOC107656452,LOC107562743
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 10399336 ~ 10401667 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043243137.1
GAGCACTCGTCCATTTGAAGGGGCGTCGCAGGGGTTCTTGCAGGGTCCTTTGGTGGTGAGATTGTCATTCAGGAGATAGGACATCATGTCTGACGCGGTAATCAGCTTCTTGAAGGATTTCTTGGCCGGTGGTGTGGCCGCTGCCATCTCCAAGACAGCTGTGGCCCCCATTGAAAGAGTCAAACTGTTACTGCAGGTCCAGCATGCCAGCAAACAGATCACGGTTGACAAACAGTACAAAGGCATCATCGATTGCGTAGTGAGAATTCCCAAAGAGCAGGGATTCGTGTCCTTCTGGAGAGGCAACCTCGCCAACGTCATCAGATACTTCCCCACACAAGCCCTCAACTTTGCCTTCAAGGACAAGTACAAGAAGATCTTCCTTGGAGGAGTTGACCAGAAGACCCAGTTCTGGCGTTATTTTGCCGGTAACCTGGCCTCTGGCGGTGCTGCCGGCGCCACCTCTCTGTGCTTCGTCTACCCTCTCGACTTCGCCAGAACAAGGCTTGCTGCTGATATCGGCAAAGGAGCAGCGGAGAGAGAGTTCACTGGCCTCGGGAACTGCATTGCCAAGATCTTCAAGTCTGATGGTATTAAGGGTCTCTACCTTGGCTTCAACGTGTCTGTCCAGGGCATTATTATCTACAGAGCTGCTTACTTCGGTGTCTATGACACAGCTAAAGGTATGCTCCCTGACCCCAAGAACACACACATTGTCGTCAGCTGGATGATTGCCCAGACTGTCACAGCTGTTGCCGGTATCATTTCATATCCCTTCGACACCGTCAGACGTCGTATGATGATGCAGTCCGGACGCAAAGGAGCTGACATTATGTACAAGGGCACACTCGACTGTTGGAAGAAGATCACCAAGGATGAGGGACCCAAAGCTTTCTTCAAGGGTGCCTGGTCTAATGTGCTCAGAGGCATGGGTGGTGCTTTTGTGCTGGTCCTGTATGACGAGATCAAGAAGTTCACATAAACATTCTCAATCCATCATGTCCATCCCACCAAAGGAACCTCTGAGCGCTGTGTATGTCTTAAGTGTACTTAGCCAAGACGGCCCAGGGGTGGACTGAGATCATGAGATCATGAGATCTCCACCCCAAcacttgtaaatatatttaaatctaccTACTGCCCTTCAGTTTTAGATGACTTTCAGTCTGATCAGgctaaaagtgatttatttatttgaaacaatccATAATGTTCTACAGTGGCTCCTCTCTTCTGTAGCTAGCTGAACACATTTTTCCCCGGACTGAAGCAAGTGGCCGTACACTGGAAATCCGACTGTTCTTGTGGTGTATTCCACCCTAtgtgttcttttaataagaataaagctgaaaatacaACA

Function

symbol description
slc25a4 Predicted to enable ATP:ADP antiporter activity. Predicted to act upstream of or within mitochondrial ADP transmembrane transport and mitochondrial ATP transmembrane transport. Predicted to be located in mitochondrial inner membrane. Predicted to be integral component of membrane. Is expressed in cephalic musculature; hypaxial myotome region; musculature system; myotome; and somite. Human ortholog(s) of this gene implicated in intrinsic cardiomyopathy (multiple); mitochondrial DNA depletion syndrome (multiple); and mitochondrial myopathy (multiple). Orthologous to human SLC25A4 (solute carrier family 25 member 4).

NR:

description
solute carrier family 25-2

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0005743 mitochondrial inner membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0005215 transporter activity molecular_function

KEGG:

id description
K05863 SLC25A4S, ANT; solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043243137.1 True 1360 mRNA 0.49 4 10399336 10401667

Neighbor

gene id symbol gene type direction distance location
helt helt,LOC107562737,LOC107656987,LOC107754167 coding upstream 32048 10365713 ~ 10367288 (+)
casp3a casp3,LOC107754122,LOC107656460,LOC107562747,LOC107746030,LOC107702336 coding upstream 58128 10336685 ~ 10341208 (+)
pcm1 pcm1,LOC107747390,LOC107721421,LOC107554391,LOC107702267 coding upstream 510677 9866164 ~ 9888659 (+)
mtus1b mtus1b,LOC107747391,LOC107656488,LOC107562915,LOC107721423,LOC107702266 coding upstream 535650 9827103 ~ 9863686 (+)
vps37a vps37a,LOC107656515,LOC107702331,LOC107747393,LOC107721427 coding upstream 593853 9799826 ~ 9805483 (+)
ankrd37 ankrd37,LOC107754130,LOC107656428,LOC107746026,LOC107702343 coding downstream 8177 10409844 ~ 10412143 (+)
LOC122347771 cyp4v8,LOC107558204,LOC107754133,LOC107656409,LOC107562739,LOC108415372,LOC106602559 coding downstream 88595 10490262 ~ 10499474 (+)
LOC122347900 mtnr1aa,LOC107591561,LOC107656395,LOC107754134,LOC107702348,LOC107746022 coding downstream 277920 10679587 ~ 10682960 (+)
LOC122347952 chrna7,LOC107748270,LOC107679711,LOC107702399,LOC107686877,LOC107548356,LOC107655813,LOC107709454,LOC107562618 coding downstream 321649 10723316 ~ 10734854 (+)
LOC122347879 msmo1,LOC107655978,LOC107745062,LOC107548349,LOC107750426,LOC107591587,LOC107702386 coding downstream 438761 10840428 ~ 10844345 (+)
G2246 LOC107754123,LOC107562734,LOC107746042,LOC107702337,LOC107558191 non-coding upstream 25489 10372962 ~ 10373847 (+)
G2219 NA non-coding upstream 319866 10078885 ~ 10079470 (+)
G2149 NA non-coding upstream 612175 9784218 ~ 9787161 (+)
LOC122353659 NA non-coding upstream 1336727 9061961 ~ 9062609 (+)
LOC122352814 NA non-coding upstream 1345863 9051908 ~ 9053473 (+)
G2350 klhl2,LOC107591556,LOC107745059,LOC107702385,LOC107655955,LOC107750425,LOC107548347 non-coding downstream 426018 10827685 ~ 10837245 (+)
G2352 NA non-coding downstream 435958 10837625 ~ 10838465 (+)
G2354 NA non-coding downstream 546452 10948119 ~ 10982967 (+)
G2420 mtnr1aa,LOC107656395,LOC107591561,LOC107702348,LOC107754134 non-coding downstream 799465 11201132 ~ 11201666 (+)
G2430 NA non-coding downstream 908926 11310593 ~ 11315354 (+)
G2253 NA other upstream 1296 10397373 ~ 10398040 (+)
fat1a fat1,fat1a,LOC107656821,LOC107702333 other upstream 64134 10256662 ~ 10335202 (+)
G2230 NA other upstream 153758 10245157 ~ 10245578 (+)
G2125 NA other upstream 986899 9408405 ~ 9412437 (+)
G2063 NA other upstream 1363736 9035086 ~ 9035600 (+)
tlr3 tlr3,LOC107754132,LOC107562740,LOC107656973,LOC107746023,LOC107702346 other downstream 81973 10483640 ~ 10490084 (+)
LOC122347856 cpe,LOC107745061,LOC107548348,LOC107591555,LOC107702282,LOC107750458 other downstream 443289 10844956 ~ 10981356 (+)
fbxo10 fbxo10,si:dkey-245p14.2,LOC107656048,LOC107702368,LOC107754157,LOC107591540,LOC107750413 other downstream 1310273 11711940 ~ 11724900 (+)
tmem192 tmem192,LOC107754158,LOC107551580,LOC107656254,LOC107591541,LOC107702369,LOC107750450 other downstream 1372289 11773956 ~ 11783070 (+)
LOC122350793 zbtb5,LOC107656143,LOC107702373,LOC107591545 other downstream 1435939 11837606 ~ 11844060 (+)

Expression


Co-expression Network