tapt1b (tapt1,LOC107750443,LOC107702406,LOC107671913,LOC108434341,LOC105908524)


Basic Information

Item Value
gene id tapt1b
gene name tapt1,LOC107750443,LOC107702406,LOC107671913,LOC108434341,LOC105908524
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12929116 ~ 12943417 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043243687.1
TGACGCCTGAATGTTGTGTCTGCGGGGAAGATGGCGGACTCAGTAGCGACTGGTCTTGCGGACGAAAACGAGACTGAAAATGAGGATAATGAGAGGGAGAAACGACTCTTCGGCGGTGTCAAAAAGACGGAGAAACAAGCCGCTGCGTCAGACCTTACAGAAACTCTGGGGTTTTACGAGAGGAAGGCGAAATGCAAGGAGAGGAAGAGCAATGTGTCAGATCTCTCTCTTGTGAGGTTTATTAGTGCTGAGTTGACTAGAGGATATTTTCTGGAACACAATGAGGCCAAATACACTGAGCGGAGAGAGAGGGTCTATACCTGCCTGCGTATTCCAAAAGAACTGGAGAAGCTGATGATGTTTGGGTTTTTCCTGTGCCTGGACGTGTTTCTGTACGTGTTCACTCTGCTGCCTCTCAGAGTGCTGCTGGCCCTGATCAGACTGCTGACACTGCCCTGCTGCGGACTCAGGGCTAGTATATGCCCCTACTGCAAAAAGAGCAGtggaTCTCGTATCTTGCAACCTGCTCAGGTGTGTGATGTTCTGAAGGGTTTCATCATGGTTCTGTGTTATTTCATGATGCATTATGTGGATTACTCCATGATGTACCACCTGATTCGGGGTCAGTCTGTCATAAAACTCTACATCATCTACAACATGCTGGAGGTGGCAGATCGTTTGTTTTCATCTTTCGGTCAGGATATTCTGGATGCTTTGTACTGGACTGCCACTGAaccaaaagagagaaaaagagctcATATAGGAGTCATCCCACATTTTTTCATGGCAGTTCTTTATGTCTTTCTACATGCCATTCTGATTATGGTTCAGGCCACCACTCTGAACGTGGCTTTCAATTCACACAACAAGTCACTGCTCACCATTATGATGTCTAATAATTTTGTTGAGATCAAAGGAAGCGTATTCAagaaatttgagaaaaataaccTCTTCCAAATGTCCAACAGTGACATCAAGGAACGATTTACAAACTACACTCTCCTACTAATCGTCTGTCTCAGAAATATGGAGCAGTTTTCCTGGAATCCAGATCATCTATGGGTACTGTTTCCTGATGTTTGTATGGTGATCGCCTCAGAGATTGCAGTGGATGTTGTCAAACATGCCTTCATCACAAAGTTTAATGACATTACAGCAGACgTCTATAGTGAATACAGAGCGAGCTTGGCATTTGATCTGGTCAGCAGCAGACAGAAGAATGCATACACAGACTACAGTGACAGTGTGTCCAGGAGAATGGGTTTCATTCCTCTTCCTCTTGCTTTACTGTTGATCAGGGTGGTGACCAGCTCAGTGAAGATCCAGGGCTCTCTGTCTATTGTTTGTGTTGTGCTCTTCTATTTGGGtATGATCACCCTGAAGGTGCTGAACAGCATTGTGCTATTGGGAAAATCCTGTATGTATGTGAAAGAGGCAAATATGGAGGAGAAGCTGTTTCAGAATCCCCCCTCTGCAGCTCCCAGCAGAGTGTCCAGCAGAGCCCACCGCACCAAACACACACGCGAGCCACCAGGTGAGCCAGCGGAGGAGGACATGTCTGCCTCAGTCACCACTCAACCCACCCAAAGGGATGAATGTCCCGCCCCTCAGATCCCCACCAGCGAATCAGATCAGTTCCTCACTACACCAGATGAATCCGAAGAGAAAAGCCTTATTCAGGACGATACCGAACTTAAACACAGGGCGCCCAAAAAAGACTTGCTGGAGATTGACCGCTTTACTATCTGTGGTAACCGAATCGACTGACACTAACGCCTACCATCAAGTTTAAGAGTGACGCCAGGCACTCTGCCCGCCCTCTCTGCCAGCTTGATTCGTTTGACATTTGAACCTGAGCTCCTTGGAACGGGACTGCAAGAAACTGcaggatatttattattaagtgaTGCACCTAATTTATTTAAGACTTATAAACAGACAATcgcaccgacacacacacacacacacacagtttttaaGCGATTGGAGTCCACCCAGTGACGTTTCCAAGCTTTTAAAAGGTTCAAGATCACCAGCGGAGGTCACCTTTGGACGGCAGGAAAGATTTTGGTCTGATGGTCATGTACTTAACCTTTCAAAGGGGGCATTCAGTTATGGCAAAAAGAGAACGGGATGAATTATATTCCTAAAGTACATAGATTCCATTTATTAGTGGAAAAATAGTGGGGttcaaataatcacaaaatgtaatatacaaaaattcataactgtttttttttttcattcataatttttctatttaaaaatgtccctTCTCctcaaaatacttttaatttgaaatattaccGTGTTCCTTGTCAGTCAATACTGAAATGTAATTACAGGTGTGTTCCAcgggttttgtttttgtgtttttgaatgaatgcagACCGCAGGCAGAAATAGCGTatcactattttatttatttatatttttaagagagTTGCTCATTTCAGTTTATGTGCAGGGTTtcctgtgacaaaaaaaaatagtgttttgcATCCTTTGAGGTAATGACCTTTTAAAAGGCTGTTGTGATACTGTGATGAAACGCATGCTTGTGGATTGAGTGAAGTGCTTTACAAGTCAGCGTCTGAATTAAAGgatcatacatttttacaacatGGTCGCATGGAACCAGAAAATTGAAGCATAATATCATAAATGAAGCTAAATTGAAGCAGTGAAACATTTCCCTTTAAGGATaaaacttttttggttttttttttccccgcaaGCTCTTGGCATCTTATTGTACCAAGAGCAGCGTATTAGATGAACAATCGTCCACTGGTGCTGATGTTGGGAGCAGATGAGAAATAATCGATTGCCAACATTCCAAAAGTCAGAATCTTGACCAAAGCAAAGTAGGATATACAACCTTTTGCTAATATCTAAggtgtattttaaagaaaaaaagggccTGTTGACCCCAAGTATACAGTTTTTGCAAGTCAGTAAGCATCAGAATCCAGTAATGTGAGCTAATAACAGTGAGCTTCATAATAACCTACTTATCAGTTGACAGTGACATTTGTGAAAGCCTGTGATTAGTCATAATGCATCATGTGTAGTACTATAGAAATTATTGGAATGCTTTTTCATCATAGAcaataatgttttatacatttgctTTACATAACGGACCACACTGtcttaaaaagtattttttgtgaTGCACTAACATTTCTTAGTACTACAGGAGATTAGAATTTAAGTTGTTTTTCTCTCAGTAATGACaacatgttttgtatttctgtttctgtttttttattttggactgATTTTGGAATTTGTCTTTGCTGTATTACAAATGTATGGCTGTGATTGCTTTGCTTTGTAATATCATTAAGATACACTCAGTCAGCATGTCGACAGCCGTCATATTGAGTAAGGTGCTCCGTTTTTTCACAAAAGGTTGATTTAATTTATCGTTTCATAACTTGTAAATTGAAAATATCAACTATGCCAAGGAATTGTTTACCCAGTTATCAAACTAATGCAAACTCTGAATCacacttttttcaaaacctCCTCAGAAGCTTTCTCTTGACTTAAACTGCcaaaatgatgcttttttttttgcattttaaacattgaaGTTAGAAATACTCCttgtttttgaaagtaaaaGATGCTCGGTTTTGTTTTCGGTGTAACTGCCTGTGCATTCCCAAAGGTTCGGTCTCCTTTAGACTCTTGAAATAAGGCTGAAGCTGAACTGCACTGGATATGGATCGCTACTATGATTTTGCTTGACAGAACTCGCTTCCACTTATttggaaaagcaaaagaaaaaaaaattcaaccaTCCCAAGTTCTTTCAATACTGCTGGACTTCACTACCGTTTTGTTCTCACTGGTCAAtatcatgttgttgtttttggtgttttttttttgtaccgaGATCGGCTCCAAGGTTCTTACAACTTGTTTTTCCTGTAGAAACTGAAGAGGAATGACAATGTCCAATCCCTTGTATGGGATGTTTTAGAGACAGAAATGGGGAGAGGAATCAGGGCGTTATGTTAAttaaagttttgttgttttgta
>XM_043243696.1
GACGCCTGAATGTTGTGTCTGCGGGGAAGATGGCGGACTCAGTAGCGACTGGTCTTGCGGACGAAAACGAGACTGAAAATGAGGATAATGAGAGGGAGAAACGACTCTTCGGCGGTGTCAAAAAGACGGAGAAACAAGCCGCTGCGTCAGACCTTACAGAAACTCTGGGGTTTTACGAGAGGAAGGCGAAATGCAAGGAGAGGAAGAGCAATGTGTCAGATCTCTCTCTTGTGAGGTTTATTAGTGCTGAGTTGACTAGAGGATATTTTCTGGAACACAATGAGGCCAAATACACTGAGCGGAGAGAGAGGGTCTATACCTGCCTGCGTATTCCAAAAGAACTGGAGAAGCTGATGATGTTTGGGTTTTTCCTGTGCCTGGACGTGTTTCTGTACGTGTTCACTCTGCTGCCTCTCAGAGTGCTGCTGGCCCTGATCAGACTGCTGACACTGCCCTGCTGCGGACTCAGtggaTCTCGTATCTTGCAACCTGCTCAGGTGTGTGATGTTCTGAAGGGTTTCATCATGGTTCTGTGTTATTTCATGATGCATTATGTGGATTACTCCATGATGTACCACCTGATTCGGGGTCAGTCTGTCATAAAACTCTACATCATCTACAACATGCTGGAGGTGGCAGATCGTTTGTTTTCATCTTTCGGTCAGGATATTCTGGATGCTTTGTACTGGACTGCCACTGAaccaaaagagagaaaaagagctcATATAGGAGTCATCCCACATTTTTTCATGGCAGTTCTTTATGTCTTTCTACATGCCATTCTGATTATGGTTCAGGCCACCACTCTGAACGTGGCTTTCAATTCACACAACAAGTCACTGCTCACCATTATGATGTCTAATAATTTTGTTGAGATCAAAGGAAGCGTATTCAagaaatttgagaaaaataaccTCTTCCAAATGTCCAACAGTGACATCAAGGAACGATTTACAAACTACACTCTCCTACTAATCGTCTGTCTCAGAAATATGGAGCAGTTTTCCTGGAATCCAGATCATCTATGGGTACTGTTTCCTGATGTTTGTATGGTGATCGCCTCAGAGATTGCAGTGGATGTTGTCAAACATGCCTTCATCACAAAGTTTAATGACATTACAGCAGACgTCTATAGTGAATACAGAGCGAGCTTGGCATTTGATCTGGTCAGCAGCAGACAGAAGAATGCATACACAGACTACAGTGACAGTGTGTCCAGGAGAATGGGTTTCATTCCTCTTCCTCTTGCTTTACTGTTGATCAGGGTGGTGACCAGCTCAGTGAAGATCCAGGGCTCTCTGTCTATTGTTTGTGTTGTGCTCTTCTATTTGGGtATGATCACCCTGAAGGTGCTGAACAGCATTGTGCTATTGGGAAAATCCTGTATGTATGTGAAAGAGGCAAATATGGAGGAGAAGCTGTTTCAGAATCCCCCCTCTGCAGCTCCCAGCAGAGTGTCCAGCAGAGCCCACCGCACCAAACACACACGCGAGCCACCAGGTGAGCCAGCGGAGGAGGACATGTCTGCCTCAGTCACCACTCAACCCACCCAAAGGGATGAATGTCCCGCCCCTCAGATCCCCACCAGCGAATCAGATCAGTTCCTCACTACACCAGATGAATCCGAAGAGAAAAGCCTTATTCAGGACGATACCGAACTTAAACACAGGGCGCCCAAAAAAGACTTGCTGGAGATTGACCGCTTTACTATCTGTGGTAACCGAATCGACTGACACTAACGCCTACCATCAAGTTTAAGAGTGACGCCAGGCACTCTGCCCGCCCTCTCTGCCAGCTTGATTCGTTTGACATTTGAACCTGAGCTCCTTGGAACGGGACTGCAAGAAACTGcaggatatttattattaagtgaTGCACCTAATTTATTTAAGACTTATAAACAGACAATcgcaccgacacacacacacacacacacagtttttaaGCGATTGGAGTCCACCCAGTGACGTTTCCAAGCTTTTAAAAGGTTCAAGATCACCAGCGGAGGTCACCTTTGGACGGCAGGAAAGATTTTGGTCTGATGGTCATGTACTTAACCTTTCAAAGGGGGCATTCAGTTATGGCAAAAAGAGAACGGGATGAATTATATTCCTAAAGTACATAGATTCCATTTATTAGTGGAAAAATAGTGGGGttcaaataatcacaaaatgtaatatacaaaaattcataactgtttttttttttcattcataatttttctatttaaaaatgtccctTCTCctcaaaatacttttaatttgaaatattaccGTGTTCCTTGTCAGTCAATACTGAAATGTAATTACAGGTGTGTTCCAcgggttttgtttttgtgtttttgaatgaatgcagACCGCAGGCAGAAATAGCGTatcactattttatttatttatatttttaagagagTTGCTCATTTCAGTTTATGTGCAGGGTTtcctgtgacaaaaaaaaatagtgttttgcATCCTTTGAGGTAATGACCTTTTAAAAGGCTGTTGTGATACTGTGATGAAACGCATGCTTGTGGATTGAGTGAAGTGCTTTACAAGTCAGCGTCTGAATTAAAGgatcatacatttttacaacatGGTCGCATGGAACCAGAAAATTGAAGCATAATATCATAAATGAAGCTAAATTGAAGCAGTGAAACATTTCCCTTTAAGGATaaaacttttttggttttttttttccccgcaaGCTCTTGGCATCTTATTGTACCAAGAGCAGCGTATTAGATGAACAATCGTCCACTGGTGCTGATGTTGGGAGCAGATGAGAAATAATCGATTGCCAACATTCCAAAAGTCAGAATCTTGACCAAAGCAAAGTAGGATATACAACCTTTTGCTAATATCTAAggtgtattttaaagaaaaaaagggccTGTTGACCCCAAGTATACAGTTTTTGCAAGTCAGTAAGCATCAGAATCCAGTAATGTGAGCTAATAACAGTGAGCTTCATAATAACCTACTTATCAGTTGACAGTGACATTTGTGAAAGCCTGTGATTAGTCATAATGCATCATGTGTAGTACTATAGAAATTATTGGAATGCTTTTTCATCATAGAcaataatgttttatacatttgctTTACATAACGGACCACACTGtcttaaaaagtattttttgtgaTGCACTAACATTTCTTAGTACTACAGGAGATTAGAATTTAAGTTGTTTTTCTCTCAGTAATGACaacatgttttgtatttctgtttctgtttttttattttggactgATTTTGGAATTTGTCTTTGCTGTATTACAAATGTATGGCTGTGATTGCTTTGCTTTGTAATATCATTAAGATACACTCAGTCAGCATGTCGACAGCCGTCATATTGAGTAAGGTGCTCCGTTTTTTCACAAAAGGTTGATTTAATTTATCGTTTCATAACTTGTAAATTGAAAATATCAACTATGCCAAGGAATTGTTTACCCAGTTATCAAACTAATGCAAACTCTGAATCacacttttttcaaaacctCCTCAGAAGCTTTCTCTTGACTTAAACTGCcaaaatgatgcttttttttttgcattttaaacattgaaGTTAGAAATACTCCttgtttttgaaagtaaaaGATGCTCGGTTTTGTTTTCGGTGTAACTGCCTGTGCATTCCCAAAGGTTCGGTCTCCTTTAGACTCTTGAAATAAGGCTGAAGCTGAACTGCACTGGATATGGATCGCTACTATGATTTTGCTTGACAGAACTCGCTTCCACTTATttggaaaagcaaaagaaaaaaaaattcaaccaTCCCAAGTTCTTTCAATACTGCTGGACTTCACTACCGTTTTGTTCTCACTGGTCAAtatcatgttgttgtttttggtgttttttttttgtaccgaGATCGGCTCCAAGGTTCTTACAACTTGTTTTTCCTGTAGAAACTGAAGAGGAATGACAATGTCCAATCCCTTGTATGGGATGTTTTAGAGACAGAAATGGGGAGAGGAATCAGGGCGTTATGTTAAttaaagttttgttgttttgta

Function

symbol description
tapt1 Predicted to enable growth hormone-releasing hormone receptor activity. Involved in positive regulation of cilium assembly. Located in centrosome and ciliary basal body.

NR:

description
PREDICTED: transmembrane anterior posterior transformation protein 1 homolog

GO: NA

KEGG:

id description
K23404 TAPT1; transmembrane anterior posterior transformation protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043243687.1 True 4053 mRNA 0.40 15 12929116 12943417
XM_043243696.1 False 4019 mRNA 0.40 14 12929116 12943416

Neighbor

gene id symbol gene type direction distance location
fgfbp2b LOC107750470,LOC107702288 coding downstream 29453 12897567 ~ 12899663 (-)
fgfbp1b LOC107709462,LOC107548318 coding downstream 34869 12892635 ~ 12894247 (-)
uchl1 uchl1,LOC107709457,LOC107548360,LOC107701450,LOC107750438 coding downstream 52718 12873205 ~ 12876398 (-)
chrnb5a chrnb2a,LOC107548317,LOC107656869,LOC107709434,LOC107702400,LOC107562601 coding downstream 74122 12842252 ~ 12854994 (-)
chrna6 chrna6,LOC107709456,LOC107655806,LOC107750436,LOC108260984,LOC108412407 coding downstream 105642 12816755 ~ 12823474 (-)
ldb2b ldb2b,LOC107562611,LOC107750444,LOC107702407,LOC107548319,LOC107671914,LOC107709436,LOC108434309 coding upstream 692 12944109 ~ 12956262 (-)
qdprb.1 qdprb1,qdpr,LOC107750446,LOC107702409,LOC108437732 coding upstream 20181 12963598 ~ 12966507 (-)
adgrl3.1 adgrl3.1,LOC107709467,LOC107671918,LOC107702411 coding upstream 49827 12993244 ~ 13084503 (-)
rfc1 rfc1,LOC107709439,LOC107700290,LOC107757601 coding upstream 180454 13123871 ~ 13136414 (-)
rpl9 rpl9,LOC107671920,LOC107700291,LOC107709470 coding upstream 194010 13137427 ~ 13141344 (-)
G3020 NA non-coding downstream 41463 12886776 ~ 12887653 (-)
G2891 NA non-coding downstream 311074 12617768 ~ 12618042 (-)
G2889 NA non-coding downstream 333822 12592441 ~ 12595294 (-)
G2882 NA non-coding downstream 378877 12549922 ~ 12550239 (-)
G2842 NA non-coding downstream 473544 12455354 ~ 12455572 (-)
G3070 NA non-coding upstream 262370 13205787 ~ 13206826 (-)
G3074 NA non-coding upstream 351280 13294697 ~ 13295015 (-)
G3080 NA non-coding upstream 359336 13302753 ~ 13313529 (-)
trnar-ucg_68 NA non-coding upstream 445017 13388434 ~ 13388506 (-)
trnar-ucg_69 NA non-coding upstream 445836 13389253 ~ 13389325 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other downstream 2634 12904199 ~ 12926482 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 563008 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 811733 12097910 ~ 12117383 (-)
apela NA other downstream 1140450 11783629 ~ 11788666 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 1348399 11514151 ~ 11580717 (-)
smim18 NA other upstream 25676 12969093 ~ 12973012 (-)
smim14 smim14,LOC107757606,LOC107700293 other upstream 211069 13154486 ~ 13159444 (-)
G3072 NA other upstream 347879 13291296 ~ 13291723 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 886046 13829463 ~ 13842664 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other upstream 938476 13881893 ~ 13895284 (-)

Expression


Co-expression Network