fgfbp1b (LOC107709462,LOC107548318)


Basic Information

Item Value
gene id fgfbp1b
gene name LOC107709462,LOC107548318
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 12892635 ~ 12894247 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043244029.1
GCTCATTAAAGGGCTTTTCTCGTGTCAAAGAATCTGATTGTTCTGTAGTAAGTGGGTGTGTGTCACTTGACATAAATACCACGAGGGAGTTCATTCTGACGTAAACTAGTGAGGGAATCTCATCACACATCTGTCCTCGTAACTCTTATTGaTCGTTGCGTCACTGAAAGAAATGTCTCTCCGTGGGACTCTCGCGCTCCTGCTGTTCCTCGCGTGTCTTTCCCAGCTCATCTTCACCGCTGAAAGCTTTAGGGGTGCAAGGAGGAAAGGGGGGAGGCCGGTGAGCCGAGGTGATGATAACATTTCCGTGCGGAAAGGAAAGTTCGCGACCAAGGACAAAGCGCGGTGCTCGTGGGCGGCGCGCGGGGAGGACGGGTACACCATGACCGTTACATGCAAGCCTGCAGACGGGGATGAATTCGCCTGTCAGTACACTGCCAGGCCCGCGACGTGCACCGAATACGGGTCGAATCCCGAGGGCTATTGGAAACAGATCGCCAGATCGGTTAAAAAGCAGAAGAAACTCTGCGCGGATCCGCGCTCGATGATCCGAGCGGGCATGTGCAGGCGCGCGCCGCCGGATGCGCATTTCAAACTCACCGAAACGAGGCGAGTTAAACCTCCCAGCACAGAGAAGACGCCGACAGCGACGAACGCGACGCCTCTAGAAAGTAAGCGCCAGTGCACGGGACGCGCTGACCACAGCGAGGTGGCGAAAGAGAAGTGCGGAGAGTCCTGGGCGAGCCTTTGCGCGTTCCTCTTCACCGTGATCCAGAGCGGGGACTGCTGAGCGCGCGCTTGAGGGCACTGTTATAGCCTACTACTGATTGTTTTGTAAAGGTGTAAAACCTcgcgtttttttattataaacaatatgcACTGTATTGATTCTGACAATTGGAAAGGTGAGTCGAGAAGCGCTTGTTCCCATCACTTGTATAGTGGCACTAAATTGATCCTTCACACATTTAGGACTACGGTTTTTAATGATGACATTCAATCGAATTACAGTGATATGTCTATTTATatcatgttaaatattacatttgtatttatatttattaaatgggAATTTCGAGGGATGTACGgaaagtaaataatttagatatttgaagttattttttatttttatttaaatagacgACCAGTCCCAGTGGCtttttgttgttacttttaTGATCATTGACTGTAAACCAGTTGTTTTATATCTTTCAGTGAATTTGATTTTATCAAGGGGCAAGAGAAGCCCTTTAAATGTGTAACATTGTGCTTCAACAGTTACATTCGcaaatatatgtacatttatttttcataaaaataaattggatGACGCTGGATGATCACCTTCATCATCTCGTTTTAATACTCAGATGTTGTTACACAgcaaatgtacattatttttgtcAGTCTACTGTAAAATACAAGACTCACTGCATTGTAACTGTATTTAtgacatgcaaaataaatatttttatgta

Function

NR:

description
PREDICTED: fibroblast growth factor-binding protein 1-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043244029.1 True 1478 mRNA 0.45 2 12892635 12894247

Neighbor

gene id symbol gene type direction distance location
uchl1 uchl1,LOC107709457,LOC107548360,LOC107701450,LOC107750438 coding downstream 16237 12873205 ~ 12876398 (-)
chrnb5a chrnb2a,LOC107548317,LOC107656869,LOC107709434,LOC107702400,LOC107562601 coding downstream 37641 12842252 ~ 12854994 (-)
chrna6 chrna6,LOC107709456,LOC107655806,LOC107750436,LOC108260984,LOC108412407 coding downstream 69161 12816755 ~ 12823474 (-)
chrnb3a chrnb3a,LOC107562617,LOC107655822,LOC107548357,LOC107709455,LOC107702298,LOC107750476 coding downstream 98231 12778589 ~ 12794404 (-)
chrna8 LOC107709454,LOC107655813,LOC107548356,LOC107562618,LOC107702399,LOC108410819 coding downstream 119805 12724574 ~ 12772830 (-)
fgfbp2b LOC107750470,LOC107702288 coding upstream 3320 12897567 ~ 12899663 (-)
tapt1b tapt1,LOC107750443,LOC107702406,LOC107671913,LOC108434341,LOC105908524 coding upstream 34869 12929116 ~ 12943417 (-)
ldb2b ldb2b,LOC107562611,LOC107750444,LOC107702407,LOC107548319,LOC107671914,LOC107709436,LOC108434309 coding upstream 49862 12944109 ~ 12956262 (-)
qdprb.1 qdprb1,qdpr,LOC107750446,LOC107702409,LOC108437732 coding upstream 69351 12963598 ~ 12966507 (-)
adgrl3.1 adgrl3.1,LOC107709467,LOC107671918,LOC107702411 coding upstream 98997 12993244 ~ 13084503 (-)
G3020 NA non-coding downstream 4982 12886776 ~ 12887653 (-)
G2891 NA non-coding downstream 274593 12617768 ~ 12618042 (-)
G2889 NA non-coding downstream 297341 12592441 ~ 12595294 (-)
G2882 NA non-coding downstream 342396 12549922 ~ 12550239 (-)
G2842 NA non-coding downstream 437063 12455354 ~ 12455572 (-)
G3070 NA non-coding upstream 311540 13205787 ~ 13206826 (-)
G3074 NA non-coding upstream 400450 13294697 ~ 13295015 (-)
G3080 NA non-coding upstream 408506 13302753 ~ 13313529 (-)
trnar-ucg_68 NA non-coding upstream 494187 13388434 ~ 13388506 (-)
trnar-ucg_69 NA non-coding upstream 495006 13389253 ~ 13389325 (-)
gria2a gria2a,LOC107548351,LOC107702389,LOC107745055,LOC107750427,LOC108443988,LOC107655932,LOC107591557 other downstream 526527 12337962 ~ 12366108 (-)
ugt8 ugt8,LOC107745064,LOC107656191,LOC107750420,LOC107702381 other downstream 775252 12097910 ~ 12117383 (-)
apela NA other downstream 1103969 11783629 ~ 11788666 (-)
ptprdb ptprdb,LOC107754148,LOC107656000,LOC107746012,LOC107591569,LOC107551589 other downstream 1311918 11514151 ~ 11580717 (-)
G2584 LOC107656769,LOC107551593,LOC107746013,LOC107754144 other downstream 1379802 11510439 ~ 11512833 (-)
prom1b LOC107709459,LOC107671910,LOC107548362 other upstream 9952 12904199 ~ 12926482 (-)
smim18 NA other upstream 74846 12969093 ~ 12973012 (-)
smim14 smim14,LOC107757606,LOC107700293 other upstream 260239 13154486 ~ 13159444 (-)
G3072 NA other upstream 397049 13291296 ~ 13291723 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other upstream 935216 13829463 ~ 13842664 (-)

Expression


Co-expression Network