LOC122348885


Basic Information

Item Value
gene id LOC122348885
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 21734334 ~ 21736708 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043244779.1
caaactaaaactacagcttcatcaaccacatctccaacaacaagcaatccaacaacatccgcAGCTGTAACGTCTGAAtccactactcttactacaataccttcaacttcagagagtacaccagcacaaactacaactacagcttcatcaaccacttctccaacaacaagcaatccaacaacatccgcAGCTGTAACGTCTGAATCCACGACTCTTACTACAAtaccttcaacttcagagagcacaccagcacaaactaaaactacagcttcatcaactGCATCTCAAACAATGAGTAATCCAATAACATCAGCAGCTGCAACTTCTAAAACCATGACTCTTACTACAAtaccttcaacttcagagagtacaccagcacaaactacaactacagcttcatcaaccacatctccaacaacaagcaatccaacaacatccgcAGCTGTAATATCTGAAGCCACGACTCTTACTACAAtaccttcaacttcagagagtacaccagcacaaaccacAACTACAGTTTtatcaaccacatctccaacaacgaGCAATCCAACAAAATCcacagctgtaacatctgaatccactactcttactacaataCCTACAAGTAcagagagtacaccagcacaaactacaattacagcttcatcaaccacatctccaacaacaagcaatccaacaacatccacagctgtaacatctgaatccaCTACTCTTATTACAAAATcttcaacttcagagagtacaccagcacaaactacaattacagcttcatcaaccacatctccaacaacaagcaatccaacaacatccacagctgtaacatctgaatccactactcttactacaataccttcaacttcagagagtacaccagcacaaactacaattatagcttcatcaaccacatctccaacaacaagcaattCAATAACATCAGCAGCTGCAACTTCTAAAACCATGACTCTTACTACAAtaccttcaacttcagagagtacaccagcacaaactacaactaaagcttcatcaaccacatctccaacaacaagcaatccaacaacatccgcagctgtaacatctgaagCCACAACTTTTACTACAATACCTTCAACTTCAcagagtacaccagcacaaaccacaactacagcttcatcaactGCATTTCAAACAATGAGTAATCCAACAACATCAGCAGCTGCAACTTCTAAAACCATGACTCTTACTACACTACTttcaacttcagagagtacaccagcacaaactacaatTACAGCTTCATCATCGACATCTCCAATAACgagcaatccaacaacatccacagctgtaacatctgaagCCACAACTCTTACTACAATACCTACAAGttcagagagtacaccagcacaaaccacAATTACAGCTTCATCAAGCACATCTCCAACAACgagcaatccaacaacatccaCAGCTGTAACATCTAAAGCCACAACTCTTACTACAATACTTTCATCTTCACAGAGTtcaccagcacaaactacaactacagcttcatcaactGCATCTCAAACAACGAGTAATCCAACAACATCAGTAGCTGCAACTTCTGATCCTACTACTCTTTCTGCAACAACAATGCTTAcaacttcagagagtacaccagtacaaactacaactacagcttcatcaaccacatctccaacaacaagcaatccaacagcatccgcagctgtaacatctgaagTCACAACTCTTACTACAATACAttcaacttcagagagtacaccagcacaaaccacAACTACACCTTCATCAACCATATCTCCAACAACGAGCAAACAAACAACTTCcgcagctgtaacatctgaagccacgactcttactacaataccttcaacttcagagagtacaccagcacaaaccacaactacagcttcatcaaccacatctccaacaacaagcaaacaaacaacatGGTACAACAGCAAGAGCcacaactacagcttcatcaactGCTTCTACAACACTGAGAAATCCAACAACATCAGCAGCTGTAACTTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043244779.1 True 2043 mRNA 0.41 2 21734334 21736708

Neighbor

gene id symbol gene type direction distance location
si:dkey-56e3.3 LOC107719778,LOC107689468,LOC107552374 coding downstream 21766 21707938 ~ 21712568 (-)
mogs mogs,LOC107719770,LOC107689467,LOC107551727,LOC107567052,LOC107692169 coding downstream 42961 21687227 ~ 21691373 (-)
LOC122342104 LOC107689469,LOC107551743,LOC107719777,LOC797711,LOC107711522,LOC107567046,LOC107692200 coding downstream 54804 21676087 ~ 21679530 (-)
fbxo41 fbxo41,LOC107689471,LOC107692170,LOC108260496 coding downstream 70767 21622365 ~ 21663567 (-)
smox smox,LOC107689473,LOC107551688,LOC107551695,LOC107692173 coding downstream 156965 21568102 ~ 21577369 (-)
muc13a NA coding upstream 1314 21738022 ~ 21756866 (-)
LOC122348917 LOC107720307 coding upstream 72083 21808791 ~ 21812589 (-)
LOC122348927 NA coding upstream 90848 21827556 ~ 21832934 (-)
LOC122348936 NA coding upstream 96654 21833362 ~ 21847155 (-)
dtx4b dtx4,LOC107676128,LOC107551788,LOC107692161,LOC107746726,LOC107603012 coding upstream 130284 21866992 ~ 21882353 (-)
G5047 NA non-coding downstream 113753 21612918 ~ 21620581 (-)
LOC122349798 NA non-coding downstream 1015444 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 1032036 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1265319 20466162 ~ 20469015 (-)
G4930 NA non-coding downstream 1274150 20459541 ~ 20460184 (-)
G5327 NA non-coding upstream 307194 22043902 ~ 22044137 (-)
G5366 NA non-coding upstream 611806 22348514 ~ 22382972 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 675754 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 697905 22434613 ~ 22438354 (-)
G5369 LOC107746262 non-coding upstream 708250 22444958 ~ 22446648 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other downstream 170257 21549617 ~ 21564077 (-)
ctnna2 ctnna2,LOC107689479 other downstream 323763 20906170 ~ 21410571 (-)
G4958 NA other downstream 1047594 20683842 ~ 20686740 (-)
timm10 timm10,LOC107674252,LOC107746912,LOC107556822 other downstream 1365223 20367129 ~ 20369111 (-)
zdhhc5a zdhhc5a,LOC107730508,LOC107551501,LOC107746524,LOC107674225,LOC107556824,LOC107664565,LOC108412478 other downstream 1421386 20289317 ~ 20312948 (-)
LOC122348907 NA other upstream 25173 21761881 ~ 21799744 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other upstream 522731 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other upstream 536110 22272818 ~ 22287521 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other upstream 802976 22539684 ~ 22602648 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other upstream 1128123 22864831 ~ 22903414 (-)

Expression


Co-expression Network