LOC122348927


Basic Information

Item Value
gene id LOC122348927
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 21827556 ~ 21832934 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043244817.1
tcaacgtctagtggagcaacaacaactgtgcctgacagtacaaaatctacagatgCATCAACCGCAACTGTGCCTGACTCCACAACAAGTACTGATGCATCAACAACTTTGGCTACCAATGTCTTACTTCAGTCATCATCAACTCTGgcaccaacatcaacaacatctgaTGCAACAACCACAACTCTGCTTGACACCAATACAACTATTGATGTGACAACAACTTTATCTTCCCAATCCACCGAATCAACATCATCAACTATTGCACCAACATCGACAGCATCTGTTGCTTCTACTACAGATCTGTCTGACACCACAACAAGTACAGATACAACAACatctttggcttccacaaccaccGCTCAGTCATCATCACATACTTCACCAACATCAATAGCTAATGGAGAAACAACAACTGTGACTGAGACCACAATATCTAGTTATGCGACAACAACTTTGGATTCAGGAACCGCACCGCTAATTGTAACAACTGATGCATCAACCACAAGTCTGTCTGACAGCACCACATCTACAGATGCAACAACaactttggcttccacaaccatgccccaaacatcctcaagtattTCATCATCAACTCTGgcaccaacatcaacaacatctgaTGCAACAACCACAACTCTGCTTGACACCAATACAACTATTGATGTGACAACAACTTTATCTTCCCAATCCACCGAATCAACATCATCAACTATTGCACCAACATCGACAGCATCTGTTGCTTCTACTACAGATCTGTCTGACACCACAACAAatgCATCAACCGCAACTGTGCCTGACTCCACAACAAGTACTGATGCATCAACAACTTTGGCTACCAATGTCTTACTTCAGTCATCATCAACTCTGgcaccaacatcaacaacatctgaTGCAACAACCACAACTCTGCTTGACACCAATACAACTATTGATGTGACAACAACTTTATCTTCCCAATCCACCGAATCAACATCATCAACTATTGCACCAACATCGACAGCATCTGTTGCTTCTACTACAGATCTGTCTGACACCACAACAAGTACAGATACAACAACatctttggcttccacaaccaccGCTCAATCATCATCACATACTTCACCAACATCAATAGCTAATGGAGAAACAACAACTGTGACTGAGACCACAATATCTAGTTATGCGACAACAACTTTGGATTCAGGAACCGCACCGCTAATTGTAACAACTGATGCATCAACCACAAGTCTGTCTGACAGCACCACATCTACAGATGCAACAACaactttggcttccacaaccatgccccaaacatcctcaagtattgTCATCATCAACTCTGgcaccaacatcaacaacatctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043244817.1 True 1353 mRNA 0.43 5 21827556 21832934

Neighbor

gene id symbol gene type direction distance location
LOC122348917 LOC107720307 coding downstream 14967 21808791 ~ 21812589 (-)
muc13a NA coding downstream 70690 21738022 ~ 21756866 (-)
LOC122348885 NA coding downstream 90848 21734334 ~ 21736708 (-)
LOC122337558 LOC107552383 coding downstream 92843 21713527 ~ 21734713 (-)
si:dkey-56e3.3 LOC107719778,LOC107689468,LOC107552374 coding downstream 114988 21707938 ~ 21712568 (-)
LOC122348936 NA coding upstream 428 21833362 ~ 21847155 (-)
dtx4b dtx4,LOC107676128,LOC107551788,LOC107692161,LOC107746726,LOC107603012 coding upstream 34058 21866992 ~ 21882353 (-)
trnat-ugu NA coding upstream 51184 21884118 ~ 21884190 (-)
smu1b smu1b,LOC107720315,LOC107692159,LOC107746727,LOC107551820,LOC108431794 coding upstream 57418 21890352 ~ 21900526 (-)
rps6 rps6,LOC107551827,LOC107603014,LOC107720314,LOC107676127,LOC107746729 coding upstream 68533 21901467 ~ 21905151 (-)
G5047 NA non-coding downstream 206975 21612918 ~ 21620581 (-)
LOC122349798 NA non-coding downstream 1108666 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 1125258 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1358541 20466162 ~ 20469015 (-)
G4930 NA non-coding downstream 1367372 20459541 ~ 20460184 (-)
G5327 NA non-coding upstream 210968 22043902 ~ 22044137 (-)
G5366 NA non-coding upstream 515580 22348514 ~ 22382972 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 579528 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 601679 22434613 ~ 22438354 (-)
G5369 LOC107746262 non-coding upstream 612024 22444958 ~ 22446648 (-)
LOC122348907 NA other downstream 27812 21761881 ~ 21799744 (-)
G5108 NA other downstream 54794 21724387 ~ 21772762 (-)
G5104 NA other downstream 61272 21718139 ~ 21766284 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other downstream 263479 21549617 ~ 21564077 (-)
ctnna2 ctnna2,LOC107689479 other downstream 416985 20906170 ~ 21410571 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other upstream 426505 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other upstream 439884 22272818 ~ 22287521 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other upstream 706750 22539684 ~ 22602648 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other upstream 1031897 22864831 ~ 22903414 (-)
G5468 cbr1,LOC107746284,LOC107560976,LOC107692178 other upstream 1080966 22913900 ~ 22916405 (-)

Expression


Co-expression Network