LOC122348936


Basic Information

Item Value
gene id LOC122348936
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 21833362 ~ 21847155 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043244828.1
ATGCCCCAAACATCCTCAAatgCATCAACCGCAACTGTGCCTGACTCCACAACAAGTACTGATGCATCAACAACTTTGGCTACCAATGTCTTACTTCAGTCATCATCAACTCTGgcaccaacatcaacaacatctgaTGCAACAACCACAACTCTGCTTGACACCAATACAACTATTGATGTGACAACAACTTTATCTTCCCAATCCACCGAATCAACATCCTCAACTATTGCACCAACAGCGACAGCATCTGTTGCTTCTACTACAGATCTGTCTGACACCACAACAAGTACAGATACAACAACatctttggcttccacaaccaccACTCAATCATCACCACATATTTCAACAAGATCAATAGCTAATGGAGAAACAACAACTGTGACTGAGACCACAATATCTAGTTATGCGACAACAACTTTGGATTCAGGAACCGCACCGCTAATTGTAACAACTGATGCATCAACCACAAGTCTGTCTGACAGCACCACATCTACAGATGCAACAACaactttggcttccacaaccatgccccaaacatcctcaagtatttcaacgtctagtggagcaacaacaactgtgcctgacagtacaaaatctTCATCATCAACTCTGgcaccaacatcaacaacatctgaTGCAACAACCACAACTCTGCTTGACACCAATACAACTATTGATGTGACAACAACTTTATCTTCCCAATCCACCGAATCAACATCATCAACTATTGCACCAACATCGACAGCATCTGTTGCTTCTACTACAGATCTGTCTGACACCACAACAAGTACAGATACAACAACatctttggcttccacaaccaccGCTCAATCATCATCACATACTTCACCAACATCAATAGCTAATGGAGAAACAACAACTGTGACTGAGACCACAATATCTAGTTATGCGACAACAACTTTGGATTCAGGAACCGCACCGCTAATTGTAACAACTGATGCATCAACCACAAGTCTGTCTGACAGCACCACATCTACAGATGCAACAACaactttggcttccacaaccatgccccaaacatcctcaagtatttcaacgtctagtggagcaacaacaactgtgcctgacagtacaaaatctagtgatacagatgCATCAACCGCAACTGTGCCTGACTCCACAACAAGTACTGATGCATCAACAACTTTGGCTACCAATGTCTTACTTCAGTCATCATCAACTCTGgcaccaacatcaacaacatctgaTGCAACAACCACAACTCTGCTTGACACCAATACAACTATTGATGTGACAACAACTTTATCTTCCCAATCCACCGAATCAACATCATCAACTATTGCACCAACATCGACAGCATCTGTTGCTTCTACTACAGATCTGTCTGACACCACAACAAGTACAGATACAACAACatctttggcttccacaaccaccGCTCAGTCATCATCACATACTTCACCAACATCAATAGCTAATGGAGAAACAACAACTGTGACTGAGACCACAATATCTAGTTATGCGACAACAACTTTGGATTCAGGAACCGCACCGCTAATTGTAACAACTGATGCATCAACCACAAGTCTGTCTGACAGCACCACATCTACAGATGCAACAACaactttggcttccacaaccatgccccaaacatcctcaagtattTCATCATCAACTCTGgcaccaacatcaacaacatctgaTGCAACAACCACAACTCTGCTTGACACCAATACAACTATTGATGTGACAACAACTTTATCTTCCCAATCCACCGAATCAACATCATCAACTATTGCACCAACATCGACAGCATCTGTTGCTTCTACTACAGATCTGTCTGACACCACAACAAGTACAGATACAACAACatctttggcttccacaaccaccGCTCAATCATCATCACATACTTCACCAACATCAATAGCTAATGGAGAAACAACAACTGTGACTGAGACCACAATATCTAGTTATGCGACAACAACTTTGGATTCAGGAACCGCACCGCTAATTGTAACAACTGATGCATCAACCACAAGTCTGTCTGACAGCACCACATCTACAGATGCAACAACaactttggcttccacaaccatgccccaaacatcctcaagtattacgtctagtggagcaacaacaactgtgcctgacagtacaaaatctagtgatgcaaacatttcagattccacaaccactcctgtaatattaatcacagatgCATCAACCGCAACTGTGCCTGACTCCACAACAAGTACTGATGCATCAACAACTTTGGCTACCAATGTCTTACTTCAGTCATCATCAACTCTGgcaccaacatcaacaacatctgaTGCAACAACCACAACTCTGCTTGACACCAATACAACTATTGATGTGACAACAACTTTATCTTCCCAATCCACCGAATCAACATCATCAACTATTGCACCAACATCGACAGCATCTGTTGCTTCTACTACAGATCTGTCTGACACCACAACAAGTACAGATACAACAACatctttggcttccacaaccaccGCTCAGTCATCATCACATACTTCACCAACATCAATAGCTAATGGAGAAACAACAACTGTGACTGAGACCACAATATCTAGTTATGCGACAACAACTTTGGATTCAGGAACCGCACCGCTAATTGTAACAACTGATGCATCAACCACAAGTCTGTCTGACAGCACCACATCTACAGATGCAACAACaactttggcttccacaaccatgccccaaacatcctcaagtattgTCATCATCAACTCTGgcaccaacatcaacaacatctga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043244828.1 True 2781 mRNA 0.43 9 21833362 21847155

Neighbor

gene id symbol gene type direction distance location
LOC122348927 NA coding downstream 428 21827556 ~ 21832934 (-)
LOC122348917 LOC107720307 coding downstream 20773 21808791 ~ 21812589 (-)
muc13a NA coding downstream 76496 21738022 ~ 21756866 (-)
LOC122348885 NA coding downstream 96654 21734334 ~ 21736708 (-)
LOC122337558 LOC107552383 coding downstream 98649 21713527 ~ 21734713 (-)
dtx4b dtx4,LOC107676128,LOC107551788,LOC107692161,LOC107746726,LOC107603012 coding upstream 19837 21866992 ~ 21882353 (-)
trnat-ugu NA coding upstream 36963 21884118 ~ 21884190 (-)
smu1b smu1b,LOC107720315,LOC107692159,LOC107746727,LOC107551820,LOC108431794 coding upstream 43197 21890352 ~ 21900526 (-)
rps6 rps6,LOC107551827,LOC107603014,LOC107720314,LOC107676127,LOC107746729 coding upstream 54312 21901467 ~ 21905151 (-)
LOC122345057 NA coding upstream 58546 21905701 ~ 21906555 (-)
G5047 NA non-coding downstream 212781 21612918 ~ 21620581 (-)
LOC122349798 NA non-coding downstream 1114472 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 1131064 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1364347 20466162 ~ 20469015 (-)
G4930 NA non-coding downstream 1373178 20459541 ~ 20460184 (-)
G5327 NA non-coding upstream 196747 22043902 ~ 22044137 (-)
G5366 NA non-coding upstream 501359 22348514 ~ 22382972 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 565307 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 587458 22434613 ~ 22438354 (-)
G5369 LOC107746262 non-coding upstream 597803 22444958 ~ 22446648 (-)
LOC122348907 NA other downstream 33618 21761881 ~ 21799744 (-)
G5108 NA other downstream 60600 21724387 ~ 21772762 (-)
G5104 NA other downstream 67078 21718139 ~ 21766284 (-)
si:dkey-37g12.1 LOC107692174,LOC107711524 other downstream 269285 21549617 ~ 21564077 (-)
ctnna2 ctnna2,LOC107689479 other downstream 422791 20906170 ~ 21410571 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other upstream 412284 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other upstream 425663 22272818 ~ 22287521 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other upstream 692529 22539684 ~ 22602648 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other upstream 1017676 22864831 ~ 22903414 (-)
G5468 cbr1,LOC107746284,LOC107560976,LOC107692178 other upstream 1066745 22913900 ~ 22916405 (-)

Expression


Co-expression Network