c1h19orf67 (LOC107712227,LOC107676872,LOC107561872)


Basic Information

Item Value
gene id c1h19orf67
gene name LOC107712227,LOC107676872,LOC107561872
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22332974 ~ 22336292 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043244839.1
ATGGCTAAAGCAGAGCACGCGGAGTGGAAGTCTTTGCTATCCGAAGAAAATGAAGCATCCCGGTGTCTGTCAGAATCAGAAACGACTACACACGCTCTTGAAGATGTCGGTGCAATGGCGCCCTCGTTCGGTGATGAGAGGTATTTTTTAGTTGAAGGCGCAGAAGCTCAGGATAAGAGAATAATGGATGCAAAAATCTCTCCCATTGAACGGCAACTTGAGTACTTGCTGAACAAGGCTGACGAGTTTCAAACACAGCTTCTGTGGAGtcgAGAGTGCCTCCAGAATTATGGGTTTGCCCATATCGTCCCCATGTTTTTGCAAACTTGTCAGCCGTACTTCACTTACCTGGAGTCCACAGCCAGAAACTCCCACCCCTTCCGTCCAGCTCTGTCCACATACATCCGTGCACAACTTTTGCAGTTTTCTCAGCAACTGTGTTCTCGTCTGGAGCAGCTGGTGTTGCTGTACGCCTCCTTCAGTTTGTTCTCACTGGAGGAATCTGATCCACTGAGtatctCTCACTTCTTTATTGGCCAGTGTCAAATAGACAACACGAAGCTGTCAATCTTCCGGTACAGTTGCCCCACTCCTTTTCTCACATCAGCCTGTACTGGCTTATACAAACGTATGCGCTGGAATGTGGAGCGACAAATAGAGGGAGAAGGACAGACGTATGACAGTGCAGAGTTTTATTTCCTGTGCTGCGAGGATGTCATTAAGGCAGCAGACGATAAGGATGTAGACGGAAAGCGTGAGGAGGAAAATACAGAAACCGACAGAGAGAGTAGAGCACAAAGGATTTGGTCAATTGGCTGGTGGATTCAGACATACCCTGATCCAGACACAGAGGACATCACTGATtgGGTGCTGTGTTTAGTTCCTTTCGGTCAGTATAAACAGCTGTTGTGCCTGGGAAGTGAGGAGCCTTCATCCTGCACTGCCACAGACTGTCTTCTGGGGGTGCTGCTGTCTCAGGAAACAGATTTGGCACAAAAACCTGAGGTGGCGCTCAGTTAGAGCCTCACCCGGTCTGGACAGAGCATTTGGTTTATTGAAATCAGATGAGAGCACAGATAGAAGTTTAAAAACCTAACGTCAGTACATGTTTCAAAAGGTTTGTTGGTTCATGGCTGTTATCGTGCTACGTTGGTTGTTATGTGGTAAATAATTTACACTAGTGATGGAAAGTTAAACAGAGTGAAAGTTAAAGTTGGTTTgacatttaatctttattttttatgaaaacattaaaatacagagGCCATCCAAGTAGTCTGTTACAAAATCCAGAAATAAAACCTGCTGGCAGTCAGAGCCTGCTGCCTTCTTTTCtctataaaacaaagaaataaagcaatccttcctttcaaaataataaattacaaaaatatacacaataaaaggTGGAATATCTACCACACAGAAGTAGTTATGTCTTTGCACAGTTGTTGGAAAACATAGTAAAGATCAGTGGAGAGAGCAGAGCATTATAAACAATGCAGTTGTGTTCCTTCATACGTCTCATTGTAAATCAGCCCAGTCAAAGCTAATCTCAGTGCATTTTTACTGCtggcttgtgtgtgtatacagtaggTTTCTCTGTATGGTATTTGTATCTGTGATATGTCAAGTTATTCAACAGTAGTTAAGCcaaaatacagtgaaagtcagAATCTACCTGGAATCCCTGTGTTCCCTGATTATAATGTAAAGCGGTTCCTTtgatatatatactaaaaaaggtttgaattaaataaatgctactaCATTTACAGTGTCAAACAGTACTATACAGTCTCTAAACTACTTCACAGCACTAATAGACAAATAGGCAGTACAACAGTACAgtacaaatgaaattaaaaccgTAATCTCTCTTCATAATACAGTAAACAGACTTCatcactgtccctttaaattaatatacatgCACCATCACACGACAAAACATAATAGGGGCTCCAATAATCAAATTGTGCTTTAACATTCCACTGGGCCACGATCAATCAATTCATTCAGTCAGACTTGTGACAGACAAAACTCCTCACCAGactcaaata

Function

NR:

description
PREDICTED: UPF0575 protein C19orf67 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043244839.1 True 2063 mRNA 0.42 7 22332974 22336292

Neighbor

gene id symbol gene type direction distance location
serhl serhl2,LOC107603032,LOC107718629,LOC107692145,LOC107561867 coding downstream 39613 22288682 ~ 22293361 (-)
LOC122348711 atf7ip,LOC107712238,LOC107676868,LOC107692147 coding downstream 62240 22240381 ~ 22270734 (-)
grin2bb grin2bb,grin2b,LOC107676879,LOC107551907,LOC107692185,LOC107603025,LOC108258482 coding downstream 97452 22146210 ~ 22235522 (-)
si:ch211-243a20.4 NA coding downstream 196939 22132862 ~ 22136035 (-)
f8a zgc:101679,LOC107551875,LOC107676892,LOC107712230,LOC107692150,LOC107603023,LOC107718725,LOC108428241 coding downstream 200244 22128343 ~ 22132730 (-)
pnpla6 pnpla6,LOC107712242,LOC107676850,LOC107718547,LOC107692140 coding upstream 49221 22385513 ~ 22411698 (-)
cdadc1 LOC107676859,LOC107560988,LOC107718418,LOC107603039,LOC107692129,LOC107746266 coding upstream 358538 22694830 ~ 22700547 (-)
rcbtb1 rcbtb1,LOC107676891,LOC107746269,LOC107560987,LOC107718354 coding upstream 365039 22701331 ~ 22709814 (-)
ebpl ebpl,LOC107718395,LOC107746301 coding upstream 375435 22711727 ~ 22714547 (-)
kpna3 kpna3,LOC107746270,LOC107560982,LOC103046682,LOC107676880 coding upstream 379233 22715525 ~ 22730884 (-)
G5327 NA non-coding downstream 288837 22043902 ~ 22044137 (-)
G5047 NA non-coding downstream 712393 21612918 ~ 21620581 (-)
LOC122349798 NA non-coding downstream 1614084 20703476 ~ 20718890 (-)
G4946 suclg1,LOC107674246,LOC107746879,LOC107730526,LOC107664570,LOC107578564 non-coding downstream 1630676 20613916 ~ 20702298 (-)
G4934 NA non-coding downstream 1863959 20466162 ~ 20469015 (-)
G5366 NA non-coding upstream 12222 22348514 ~ 22382972 (-)
G5368 lipt1,LOC107676853,LOC107712244,LOC107692196,LOC107567789,LOC107603034,LOC107715555,LOC107718931 non-coding upstream 76170 22412462 ~ 22414007 (-)
G5395 NA non-coding upstream 98321 22434613 ~ 22438354 (-)
G5369 LOC107746262 non-coding upstream 108666 22444958 ~ 22446648 (-)
G5404 NA non-coding upstream 189824 22526116 ~ 22526422 (-)
G5356 LOC107561873,LOC107676873,LOC107712236,LOC107692142,LOC107603029,LOC107718585 other downstream 4045 22259439 ~ 22328929 (-)
LOC122348696 sept3,LOC107718600,LOC107551931,LOC107603027,LOC107692148 other downstream 45453 22272818 ~ 22287521 (-)
LOC122348907 NA other downstream 533230 21761881 ~ 21799744 (-)
G5108 NA other downstream 560212 21724387 ~ 21772762 (-)
G5104 NA other downstream 566690 21718139 ~ 21766284 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other upstream 203392 22539684 ~ 22602648 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other upstream 528539 22864831 ~ 22903414 (-)
G5468 cbr1,LOC107746284,LOC107560976,LOC107692178 other upstream 577608 22913900 ~ 22916405 (-)
gja5b cx41.8,LOC107746285,LOC107676875,LOC107566537,LOC107692115,LOC107746055,LOC107676898,LOC107746286,LOC107566538,LOC107692192,LOC107603053,LOC107746072 other upstream 681946 23018238 ~ 23030310 (-)
LOC122351696 LOC107729347,LOC107583214,LOC107566139,LOC107746059,LOC108434669,LOC106951888,LOC108258286,LOC106586852,LOC105012299 other upstream 1434732 23771024 ~ 23916448 (-)

Expression


Co-expression Network