LOC122348966 (LOC107675992,LOC107569046,LOC107729366)


Basic Information

Item Value
gene id LOC122348966
gene name LOC107675992,LOC107569046,LOC107729366
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 24032892 ~ 24038656 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043244889.1
ATGTCCAGGAGACTGCAGGCACTCATTGAGGCTAAGGGCTGCCTGACAAATTATGGCCTTTTACCCAGAGCCGTTCTCCTGCTGATGCTTGGAGCAGTTTGTATTCAACTGAATGCAGTCGTAGATGCTGATGGACCTGACAGGTGCTggtgtttaaaaagtttaaataaacgTGTCCCAAGAGAAGAGATTGAAGAGTTTTCCATTTTCCCCCGAAGATCAAAGTGTAACAAGGTTGAAATCATACTGACACTAAAACCTGTGAATAACTCAACCGAAGTGGTGAAGCGCTGCCTGAGTCCAGAGACAAAACAAGGAATTAACCTGCAGACTTGCTGGAACAAGAAGAACGTCAACAACACCTCCACATTTAAGACATCCAGCTGCTTCGAAAGCCATCACTGAAAGAGCAGAAGAGCAGGGGAGGACAGAAGGGGgaacctaaatatttttttgtaataaaagctACTTTATACAGTTTTGTAATAAAAGCCAGTTTCAAGTTATTTTGAAAATCCATTATATTACTCTCTTGATATGAGAATATGCATAAGGTTAATAGTATAGGAAACATTTTAGTTAGCAGTAGCTATTGAGTAGATATCAGACGTCGAGAAAGATAGTCTTTCTGAAGTTTCTTCACTCTATTTGAGTTTttatctgtatattttacatgaGCCCCATCTACTGGTTAAGTCTATATATGTACACTTAAAATGCCTTAAAAGTTTGACGACtgacaaaataattacatgcatgtatacaggTGTCTTACTTAAAGGTGTGTGGTTCGATCCTTTTAACCAGTATGTCaatgaactgaatttaaaatacgTTAAAAATTCAGAGAACGCTCAGTGACATTTTTTATCATAACATATCTACAGCTCATTATATTTACACGCTATGGTAAACAACAGAGTTAAATAACCAGGGGCAAACACACTGcttatttcatgttaaaataaaagtcattcacGTGCAAGcggaaaatgtaaataaataataaaatgattttaaaggcG

Function

NR:

description
PREDICTED: C-X-C motif chemokine 11-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043244889.1 True 1025 mRNA 0.37 6 24032892 24038656

Neighbor

gene id symbol gene type direction distance location
neurl1aa neurl1,neurl1aa,LOC107676877,LOC107746052,LOC107746293,LOC107692176 coding downstream 829756 23152502 ~ 23203136 (-)
setd4 setd4,LOC107676883,LOC107560975,LOC107603051,LOC107746057,LOC107692116,LOC107746281,LOC107603006 coding downstream 1119284 22909995 ~ 22913608 (-)
si:dkey-22n8.3 NA coding downstream 1168201 22860868 ~ 22864691 (-)
pknox1.2 pknox1.2,LOC107560978,LOC107676856,LOC107603046,LOC107692119,LOC107718250,LOC107746279,LOC103022264 coding downstream 1172180 22851708 ~ 22860712 (-)
pdxkb pdxk,pdxkb,LOC108428208,LOC103021965,LOC107676865,LOC108258310,LOC107718319,LOC105019670,LOC106574311 coding downstream 1195484 22819346 ~ 22837408 (-)
LOC122330280 zgc:154142,LOC107676135,LOC107594422 coding upstream 52752 24091408 ~ 24101289 (-)
LOC122351487 LOC107675992,LOC107729366,LOC107569046 coding upstream 125889 24164545 ~ 24168636 (-)
gsk3bb si:dkeyp-80c12.7,gsk3b,LOC107729358,LOC107569048,LOC107675878,LOC107684292 coding upstream 183467 24222123 ~ 24242004 (-)
zgc:175214 zgc:175214,rn122,LOC107675969,LOC107684287,LOC108434705,LOC105891037 coding upstream 229422 24268078 ~ 24274231 (-)
LOC122351310 LOC107675897,LOC107574145,LOC107684327,LOC107706793,LOC107729342,LOC107684326 coding upstream 237073 24275729 ~ 24278863 (-)
G5568 NA non-coding downstream 295999 23735976 ~ 23736893 (-)
G5583 NA non-coding downstream 297289 23733174 ~ 23735603 (-)
LOC122346633 NA non-coding downstream 319435 23708413 ~ 23713457 (-)
G5577 NA non-coding downstream 410011 23619700 ~ 23622881 (-)
LOC122342025 NA non-coding downstream 1054258 22973679 ~ 22978634 (-)
LOC122351911 NA non-coding upstream 19357 24058013 ~ 24061212 (-)
LOC122350488 NA non-coding upstream 137235 24175891 ~ 24177649 (-)
G5763 NA non-coding upstream 461737 24500393 ~ 24501238 (-)
LOC122362739 gstcd,LOC107757010,LOC107684312,LOC107729368,LOC107676029 non-coding upstream 464317 24502973 ~ 24508467 (-)
G5769 NA non-coding upstream 512927 24551583 ~ 24551880 (-)
LOC122351696 LOC107729347,LOC107583214,LOC107566139,LOC107746059,LOC108434669,LOC106951888,LOC108258286,LOC106586852,LOC105012299 other downstream 116444 23771024 ~ 23916448 (-)
gja5b cx41.8,LOC107746285,LOC107676875,LOC107566537,LOC107692115,LOC107746055,LOC107676898,LOC107746286,LOC107566538,LOC107692192,LOC107603053,LOC107746072 other downstream 1002582 23018238 ~ 23030310 (-)
G5468 cbr1,LOC107746284,LOC107560976,LOC107692178 other downstream 1116487 22913900 ~ 22916405 (-)
itsn1 itsn1,LOC107746280,LOC107718832 other downstream 1129478 22864831 ~ 22903414 (-)
atp11a atp11a,LOC107676866,LOC107692133,LOC107718450,LOC107746295 other downstream 1430244 22539684 ~ 22602648 (-)
LOC122351900 tcf7l2,lef1,LOC107750316,LOC107757012,LOC107684275,LOC107676173,LOC107594427 other upstream 22784 24061440 ~ 24082876 (-)
atp5md taf5,LOC107676012,LOC107583167,LOC107574147,LOC107684290 other upstream 155065 24193721 ~ 24251239 (-)
si:dkeyp-80c12.8 NA other upstream 179938 24218594 ~ 24221446 (-)
LOC122341607 LOC107729348,LOC107676039,LOC107578077,LOC107729356,LOC107594453,LOC107676194,LOC107729349,LOC107706808 other upstream 252775 24291431 ~ 24297591 (-)
G6056 NA other upstream 829785 24868441 ~ 24870465 (-)

Expression


Co-expression Network