LOC122349325 (LOC107576205,LOC107713396)


Basic Information

Item Value
gene id LOC122349325
gene name LOC107576205,LOC107713396
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28050085 ~ 28052500 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245320.1
ATGAGCTGCACTTATACATACCCTCCTGGATATAAGATCGAGAAAGCGTTCTGGTTCAAAAACCCTGTAAAGGATGTAGAGCCTCCAGATCTTTCTAAGGACCCTGAATACAGTCAGAGGTTTCAGTATCTGGGAGATAAACAGAAGAGCTGCACCATGAGACTgagtcatgtgacacagaaagaTGAACACAAGTACTATTTCAGATTCATCACTGATAAACCTGATGGAAAATGGACTGGTGAACCAGGAGTGACTCTTACTGTGACAGaTCTTCAGGTGGAGTCTcctgagagagtgacagagggAGATTCAGTCCGTCTGACATGTAAAAGCAGCTGCGCTCTGACTGACAGAGCAACATTCATCTGGTACAGAAACTCACAGCCATTAActgagagaagagacagaaacaatataCTCCTGCTGCAGTCAGTCAGAAGAGAGGATGCAGGCAGATATAGCTGTGATGTACAAGAACACAATCACTATCTCAGATCACCTGAGGTTTATCTCAATGTCACGTATCCATCTAAGAACGTCTCGATGTTCATAAATGGATCTGGTGAAGCTGTTTCTGTCACTGTTAAAGAACATCTGGTGATACTGTATATATCCATTGGAGCAGTTTGTGGAGCTGCAGTTATCATCATAACGGTGCTGATTTGgatcagaatgaaaaagagaaaaggcaCACTCAAAACCCagGATTCGTCAATGATGGATCCTTCTAGAAATGATTACAATAGTTATACAGCATCTGAAGTGGAGTCCTCTGAACCGGTGTATGCGAATGTAAcgaaTGCCCTTGATGCTTGTAATATTGAGATGAATGAACCTGCGTATGGGAATATAATGcgTGACAGACTGTAGTGTTTGGGAAACatggtaaaacattttatagctTTCTTTCATGTCTGTGGGTGGATCCCtgcttatattaaaataatagttcacccacaaagGAAAATTTACCCCATGATTAATTCACCCCCAAAccaggtgtatatgactttcagATGAAtataataagatttattttaaactatcctggctcttccaagcttcaCGATTGCAGTAATCAATAAAGTGGTGATCCGTATaaccttatttaaatatttaaaaacaagtggGACTCATTTTAGCCCAGGTGTTTCATCAGACAGGCAAGGCCTATTTTTGGGTGGCTTCTTGTCCAAgcatttgtatttcattaatgAGGTTCGTGTTTACGCTCATTTTCTTGTATATTTTCGTCCTCTCTATTTAACAGCTTTAACTTACAATGAAAGACGTCTTCCCTCAGGTACATTAAATGCTTTCCTGCCTATATTTACGTGTTAAGGTCAAGCCCCGCCGTAAAAATGATATGAACTGTCGTTATCaaatcaaaatgcatgtttatttgacttttttttacatcgATCTCACagtaatttgtacatatttaactCGCCGTAATTCATAACAACaccccttacagaaaacaagcaaaatcatGATTTATAGTCCATGAACACATGGGATGGCTTGGGGTTGAGTGGATCTCGGGCTGAGGGCGATCCCTTTAAATCATGTAGGTGTTGGTTTTATCCAGAACG

Function

NR:

description
PREDICTED: B-cell receptor CD22-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245320.1 True 1601 mRNA 0.40 8 28050085 28052500

Neighbor

gene id symbol gene type direction distance location
LOC122349314 LOC107571875,LOC107575339 coding downstream 3174 28045169 ~ 28046911 (-)
LOC122353000 NA coding downstream 4912 28043818 ~ 28045173 (-)
LOC122352793 LOC107659743,LOC107707706,LOC107659746,LOC107703749,LOC107573693,LOC107574523,LOC107576205,LOC107574524 coding downstream 15767 28028150 ~ 28034318 (-)
LOC122349305 LOC107758473 coding downstream 23268 27999354 ~ 28026817 (-)
LOC122352890 NA coding downstream 52443 27996411 ~ 27997642 (-)
LOC122352802 LOC107739960,LOC107707702,LOC107683702,LOC107575281 coding upstream 4606 28057106 ~ 28062090 (-)
LOC122347290 NA coding upstream 134223 28186723 ~ 28187938 (-)
LOC122347302 NA coding upstream 139206 28191706 ~ 28192763 (-)
LOC122350202 NA coding upstream 165782 28218282 ~ 28220347 (-)
LOC122349362 NA coding upstream 219069 28271569 ~ 28273549 (-)
G7138 NA non-coding downstream 39838 27843678 ~ 28010247 (-)
G7125 NA non-coding downstream 48606 27781113 ~ 28001479 (-)
G7128 NA non-coding downstream 77875 27790801 ~ 27972210 (-)
G7127 NA non-coding downstream 78586 27924414 ~ 27971499 (-)
G7157 NA non-coding downstream 85451 27961915 ~ 27964634 (-)
G7182 NA non-coding upstream 57182 28109682 ~ 28114927 (-)
G7238 NA non-coding upstream 186356 28238856 ~ 28239695 (-)
G7480 LOC107724128,LOC107574374,LOC107571134,LOC107742984,LOC107717634,LOC107574376 non-coding upstream 211897 28264397 ~ 28285334 (-)
G7491 NA non-coding upstream 256404 28308904 ~ 28803891 (-)
G7492 NA non-coding upstream 258624 28311124 ~ 28747639 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other downstream 110633 27754782 ~ 27939452 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other downstream 665006 27375317 ~ 27385079 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other downstream 795018 27240324 ~ 27255067 (-)
LOC122344379 NA other downstream 847457 27196238 ~ 27202628 (-)
LOC122349164 NA other downstream 1057503 26984544 ~ 26992582 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other upstream 168399 28220899 ~ 28223247 (-)
G7475 NA other upstream 191628 28244128 ~ 28248523 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other upstream 338539 28391039 ~ 28392053 (-)
G7515 slc27a1b,slc27a1,LOC107662711,LOC107560569,LOC107739969,LOC108413363 other upstream 353682 28406182 ~ 28446591 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other upstream 471205 28523705 ~ 28525551 (-)

Expression


Co-expression Network