gprin3b (LOC107729386,LOC107594421,LOC107675731,LOC107583186,LOC107757021,LOC107684268)


Basic Information

Item Value
gene id gprin3b
gene name LOC107729386,LOC107594421,LOC107675731,LOC107583186,LOC107757021,LOC107684268
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 24806784 ~ 24812170 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245367.1
TAAACTTGAGATTCGGATGCGCTTGGAAGGCGTGGTTTTATCTCACTGACACGCGCCTAACATTCTTTCATTGATAATCCGTCGAGCGCACCAGCTAGTGCACGAGCAGCGCGTCAATAGCGCACTAATCCAACGCAAAATGATATGAGACGGACGCGCAGGCACCAGGGAAGCCTTGGAGGGGACAATATCAGGCTTTCAGGAGGGAACCAAACTGAGTTTGGAATATTTTGACTTTGGATTTTCATCACACAAAGGCGTTCAACATGGAAAATGTACCAAACCCCAAAAGGACTGTTACTGTCCAGATGATGCCGCAGCTCGCCAATATAGATGTGCTGGGAAATAAGGAGTTAAATGCTAACTGGGACATTGAGCCAAAGTTAACCTTAAATCAGGATTGCTCCTCTGGCCAAAAAACTAAACCAGATCAGGATAATATGCACCTCAAGTCCTCCATTAAAGATTCCCACACCACTCTTCTTGGAGGAACTGTCCTTGAAGACAGAAACATGTCATCCCGTGACAGCGAAGATCACAAGCAACCTCAAAATAGTCACACAAACATGAAGATGACAGGTCAGTGTGCCAGGAACGCTGAAGGTAAAAAAACTGAACGTGACATGAATTCGAATTTGAACACTGTCCTTTCAACATCCGACCCATCGTCTACAGCTAAATGTAACCAGGAGAAAAATGGCAATAGCACAACAAAGACACTTGAAAACGAACAACATGAGCCCAAAGCACAGAGCAAAGCATCAGTAGTTGAAGGAACTAGTGCAATCAAAGAGACACTACACAATCAAATGCCAAGCCAGGCTCTGGCTTCCCTTGAGAAGGATTTCTCTCCCAGCACCAACAACACAGTCAAAGACATGCCACTTTTATCCCAACCAAAAGATGCAAGTTGCACCACCAGCAGTAGCCCATCTGAACTGGTATCCTCCACCAATGCTCCTAAAACCAGTCACTCTCAAGTTGCAACAACCGAAACCTCTCAGTCAGCACCTGGGACAAGTATCAAGACCCCACAACCACACGAGATCCATCATACACCCGCTAAAGAAGGCAAATGTAGCGATGATTGCATGAAGAAGGATTTTAAAGTGGAGTCTTCAACTAGCAACGCTAGTCACACGGAAGCGATCGATGAAGAAGTCCAAACGCAAGGAGCTTCTCCTGAAGAGCAGAAGTCAGTCCACTGCAAACTCTATCGAGAGGCATCTACCATGACTTCAGCCGTCGAGTTTAACCGGCCAAGCATGCAACGGCATGACGCAGAAGTCCAGGCGGTGGCTACGGTCTGCAGTCAATCTACAGCCACTAGCCCAAGTCTTCTATCTTTACAACCCCATCAGGGATCAGCTGGCCTGCTACCCGAGGAGACTGACAGCATAGCAGTGGTCGTGGAGGTGAAAACCACCTCACAGATTGATTGCAACACACCATCTGTTGTTACATCCAGTACAAAGCCTCCGCAGTCTGGCACAGTGATGGTGCACGTAGATGCTGACCTTCAGGAAGAGTCCAAGCTTGGGGCCAAGCCTAAAGAGCCTCTGCACAACAGCCAAAGAGGATTTTCGCCGCTTCAACCCGTCTATCAGATCAATATTGAGACCTGCAGCCAAACCAAACAATCGAACGAGACTACCTGTCACCTTCAGAGCCAAGGTTCACCTGCATCCGGTCCTGATAATGTGGCCTGTGTGCAGGAACCTGTCGCAGCATCTGATCAGCACCTCCAAGAAAAATCGGCCAAGCCTCCAGCATCCAAATCCGAGAAGCCTAAGGAGGCAGGATCTGCAAAACCACCAAAGGATATAACAACGGCTACTCCTCCAACATCAAGCTCCACGCCACAGAGCAAAAAGACAAACCGGCAAAAGCAGGCAGCATCCAAGCTGGAGACTGAGAAAGATGAGCAAGAGGCCAAACAGTCGAAGAAGAGCGTGCATGACGTCGTGTGGGATGAGCAGGGTATGACGTGGGAGGTATATGGAGCATCAGTAGATCCCGAGTCGCTAGGTTTTGCCATTCAGAGTCACCTGCAATGCAAAATCAAGGAGCATGAGAAGAAGATCATCGCTCAGACGGTCCTCAGAAAATCCTTGTCTTCGCCTCCCGGCAAGAAAAACAAGAGAAGGCAGGTTAACATCAACTTCAGGTCCATGTTTCAAAATGTTCGCCGACCCAATTGTTGCGCACGGCCGTCAGTGCTAGAGTGAAAGACTGCGCAAAAGCATGTTGGGAGATTTCTCTCGTTTGATTATTGAGGAGTTTGTTAAACATAGAAACTAATGGTGATTTGATTGTCATGTGGAGAACAGTAATattcaagaaaatatttttagaaaaagatGAAATTATTTATGGTGATAGTAAAGCTATAATGATGTTTAGAGTGCAAAGgcaataattgtaattaatatattaacggTAATGATAATATGTAGTAATCTGCATGTGTATTAGTTCAGAATGGCAGTCTTCTAACTACCCAAGATTATGCACTGTACTGACGAGCAGATGTATGCATATAACCTTTTTAACGGATTTGTTTAGCTGAAATATCTTTGTAAACTTTCCAAGTAGTAGATATTCcttttgcataattttatttgtaacataatgttgatttattgtgaatatcgaaacttttttaatttgatttagagTTTCCCGATGCTTGTTGCCATACTTGGTGTAAACTGAGCCCGTTTCTGTTTAAGAATCCAGCAGTGATGTTActatgattttatattaaaatgagagaaaaaaaagttactgtgtTTACAGCAA

Function

NR:

description
G protein-regulated inducer of neurite outgrowth 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245367.1 True 2802 mRNA 0.45 2 24806784 24812170

Neighbor

gene id symbol gene type direction distance location
zgc:154142 zgc:154142,LOC107676135,LOC107594422 coding downstream 4359 24785279 ~ 24802425 (-)
fam13a fam13a,LOC107757018,LOC107684269,LOC107594423,LOC107675741 coding downstream 22332 24743634 ~ 24784452 (-)
col17a1a LOC107684270,LOC107594448,LOC107583183,LOC107729338 coding downstream 99607 24690982 ~ 24707177 (-)
tsga10 tsga10,LOC107729387 coding downstream 132239 24665838 ~ 24674545 (-)
cracdlb LOC107729378,LOC107676351,LOC107594469 coding downstream 141394 24652160 ~ 24665390 (-)
spast LOC107749266,LOC107675648,LOC107757022 coding upstream 71230 24883400 ~ 24891467 (-)
psen2 psen2,LOC107675694,LOC107684264,LOC107757025 coding upstream 83671 24895841 ~ 24902227 (-)
jag1a jag1a,LOC107675628,LOC107594417,LOC107747432 coding upstream 111026 24923196 ~ 24951265 (-)
esf1 esf1,LOC107757029,LOC107747407,LOC107684260,LOC107675607 coding upstream 164870 24977040 ~ 24984030 (-)
LOC122329700 sgms2,LOC107729360,LOC107675923,LOC107594470,LOC107684311,LOC107757011 coding upstream 322726 25134896 ~ 25138647 (-)
G6019 NA non-coding downstream 117088 24689178 ~ 24689696 (-)
G5780 NA non-coding downstream 245331 24560839 ~ 24561453 (-)
G5769 NA non-coding downstream 254904 24551583 ~ 24551880 (-)
LOC122362739 gstcd,LOC107757010,LOC107684312,LOC107729368,LOC107676029 non-coding downstream 298317 24502973 ~ 24508467 (-)
G5763 NA non-coding downstream 305546 24500393 ~ 24501238 (-)
G6049 NA non-coding upstream 1143 24813313 ~ 24813523 (-)
LOC122345669 LOC107684322,LOC107676340,LOC107594467,LOC107756997,LOC107583244 non-coding upstream 28744 24840914 ~ 24863374 (-)
G6058 NA non-coding upstream 60459 24872629 ~ 24873541 (-)
G6061 NA non-coding upstream 98971 24911141 ~ 24913468 (-)
G6077 NA non-coding upstream 174814 24986984 ~ 25204897 (-)
LOC122341607 LOC107729348,LOC107676039,LOC107578077,LOC107729356,LOC107594453,LOC107676194,LOC107729349,LOC107706808 other downstream 509193 24291431 ~ 24297591 (-)
atp5md taf5,LOC107676012,LOC107583167,LOC107574147,LOC107684290 other downstream 555545 24193721 ~ 24251239 (-)
si:dkeyp-80c12.8 NA other downstream 585338 24218594 ~ 24221446 (-)
LOC122351900 tcf7l2,lef1,LOC107750316,LOC107757012,LOC107684275,LOC107676173,LOC107594427 other downstream 723908 24061440 ~ 24082876 (-)
LOC122350023 LOC107675992,LOC107729366,LOC107569046 other downstream 764826 24037063 ~ 24041958 (-)
G6056 NA other upstream 56271 24868441 ~ 24870465 (-)
G6073 NA other upstream 160321 24972491 ~ 24973371 (-)
G6074 LOC107583193,LOC107757030,LOC107747412 other upstream 176606 24988776 ~ 24993345 (-)
G6078 kif16b,LOC107747412,LOC107583193 other upstream 182313 24994483 ~ 24995820 (-)
LOC122349000 gstcd,LOC107757010,LOC107676029,LOC107729368,LOC107594450,LOC106610363,LOC107684312 other upstream 212552 25024722 ~ 25063882 (-)

Expression


Co-expression Network