LOC122349362


Basic Information

Item Value
gene id LOC122349362
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28271569 ~ 28273549 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245377.1
gtcttttaataaatccacagGGGAAACTCAAAGAAAACAGCACAGCCAACATGAAACGCATGCAATACAGGACAAAAAAAGGGCTTAAATGAGCAGAGACTGTCACCGGTATCAGAGAACATAGCGATCGCCCATAAAGACAACTATGGCTTTTTGTCAAGTTTTAATGTTTGGAGCagttgatgaataaataatcaacTATTATGTGTGTCTGCTTGACTAACAGATTTATTGATCACTGCGAGAACTGACTTGGTCTGATGTTGgttctatatatacacacgcatatatatatatacacatatacatacatacaaacgtCAGTTTCATCTCTAAGTGAAAGAAATTCACAGAGCTAAGAGTTATACTGCTTGATACAGCTTTATTTAGATTGGTTAAGATAATCTCAAACATCACAAAGAAGGCATAGCAAAATAAGGCAATATTTATTGATGAGTAGCCTTAATTCAGTAGATGCCAATATTGCTCTTACCATTAATTCTCTGTTAAAAACTGCTAATGATATGCCCTGtttaatatatactgcatgCACATGTACTTATCTACATTGGATATGAACCTGAACAGCATAACAATGGGATATCAGCGCTCCCCTACAGGTCGAAAGTGAAAGTGCAGCTCTGAGCAGGACGTCCTTTATCAGAACaggtttttttaaagtgaaactaGGAAGCACCAGAGAGCTGCGGGACAGGTTCCTAGTGTTTAGTTTGTCTTAACTTGTTTGTAACTTCTATCTCTAATGCACACTAGAACCAGTAACTATAATGCTTATTAGCATCAAAtcccctctttttttttgtaaatatacatgATTAAAATAAGTGATAACTTTCTCATTCACCCAAGTCTTTCTGTCCTGTGAATTCAACCGTCCACGAACAGCACACAAGAACATCTCTCTCCCCAGtgaCACAAAATGGAAGACGCTAGCATATTGTTGAAGGCACTTAAGGACCTGGAGAAAGAAGATCTTGAAGAATTCAAGTGGCACCTGTGTACTGGTTTGGCAGATGACATCGAGCGTTTTCCTAAAGGAGACCTGGAGGGAGCTGATCGTAAGGCTGTGGTGAGCCTCATGGTAAATCGGTACGATACTGACGCTGGGAAAATCACAGTCCAAGTGCTGCGCAAAATGAGTCAAAATAATCTTGCAAAAAGCCTTGAATTAAAGCTTCTGGAAGGTCAGCAGGACACGAGAAAAGCTTCAATGCCTGTGGAGTCACAGTCTGATGGGAAACAACGCAAAATGATTCAATCCAGCCAAGAGTTTAAGAGAAAATTCTTCAAGAAAAGGAGATGA

Function

GO:

id name namespace
GO:0043065 positive regulation of apoptotic process biological_process
GO:0004197 cysteine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245377.1 True 1324 mRNA 0.39 3 28271569 28273549

Neighbor

gene id symbol gene type direction distance location
LOC122350202 NA coding downstream 51222 28218282 ~ 28220347 (-)
LOC122347302 NA coding downstream 78806 28191706 ~ 28192763 (-)
LOC122347290 NA coding downstream 83631 28186723 ~ 28187938 (-)
LOC122352802 LOC107739960,LOC107707702,LOC107683702,LOC107575281 coding downstream 209479 28057106 ~ 28062090 (-)
LOC122349325 LOC107576205,LOC107713396 coding downstream 219069 28050085 ~ 28052500 (-)
LOC122360767 LOC107723996 coding upstream 169 28273718 ~ 28278609 (-)
LOC122360275 NA coding upstream 40917 28314466 ~ 28320962 (-)
LOC122360989 NA coding upstream 47631 28321180 ~ 28324016 (-)
LOC122356343 LOC107571418 coding upstream 103450 28376999 ~ 28382875 (-)
LOC122349470 LOC107578851,LOC107748053 coding upstream 213219 28486768 ~ 28488502 (-)
G7238 NA non-coding downstream 31874 28238856 ~ 28239695 (-)
G7182 NA non-coding downstream 156642 28109682 ~ 28114927 (-)
G7127 NA non-coding downstream 300070 27924414 ~ 27971499 (-)
G7157 NA non-coding downstream 306935 27961915 ~ 27964634 (-)
G7156 NA non-coding downstream 313570 27956825 ~ 27957999 (-)
G7491 NA non-coding upstream 35355 28308904 ~ 28803891 (-)
G7492 NA non-coding upstream 37575 28311124 ~ 28747639 (-)
G7516 NA non-coding upstream 134693 28408242 ~ 28410308 (-)
LOC122326209 NA non-coding upstream 141403 28414952 ~ 28417571 (-)
G7521 NA non-coding upstream 157774 28431323 ~ 28431628 (-)
G7475 NA other downstream 23046 28244128 ~ 28248523 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other downstream 48322 28220899 ~ 28223247 (-)
LOC122349330 LOC107571875,LOC107574524,LOC107703776,LOC107573813,LOC107707718,LOC107732931,LOC107703675,LOC107703672 other downstream 194924 27891901 ~ 28076645 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other downstream 332117 27754782 ~ 27939452 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other downstream 886490 27375317 ~ 27385079 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other upstream 117490 28391039 ~ 28392053 (-)
G7515 slc27a1b,slc27a1,LOC107662711,LOC107560569,LOC107739969,LOC108413363 other upstream 132633 28406182 ~ 28446591 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other upstream 250156 28523705 ~ 28525551 (-)
LOC122324333 NA other upstream 669439 28942988 ~ 28944618 (-)
G7563 ubl5,pin1,LOC107727173,LOC107685032,LOC107571794,LOC107662743 other upstream 776194 29049743 ~ 29132092 (-)

Expression


Co-expression Network