LOC122349409


Basic Information

Item Value
gene id LOC122349409
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26980305 ~ 26983587 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245477.1
CATGTTTACTACAGCACTTGATGGTATACCAGAGCTCCAACATTCGGTCATTATTACAGCATTAAGAAGGACTTCTGGAATAGACTGGATATAATAGGATCTCCGTTCAAAATGAGGTTCTTCTGTGTTCTCTGGCTCTGGATGTTTCTGACAGAATTTCATTCGACTGCTGGTGAAATTTCTTGGCAAGGATCCAGTAAAGGGAACATCACGATTACATGTTCCTACAGCTGGGCTTCAACCAACATAAAGTATTTCTGCAGAGATCCGTGTAAAGACAGAGATATATTAGTGAAGTCTGCACAGACACCTAAAGGGAGATACACACTGAAGGATTACGGCGATGGAAACTTTGTCGTAAGCATCATTGATCTACAGGAGACAGACTCTGGCATCTACTGGTGTGGAGTGGAAAGATTGGGGCCAAATGCATTTAAGAAAGTCAAACTTATTGTATCTAAAGCCAACACTGGAAGCATGGAAGAAGTGACACGTCACAGGATGATGGAAACACAAACAAGCACCGAAGTGCACTCGACTAAACCAAGACACTCAGTTTTTATATCTTCAACCTCTAAAGACAGTGCACTCCCACTGACAGGTGCTGAACACAACAAATCATCTTCAGCTGCCAATATATTCCCAGTGcctttatattatattccatacgctgctgctggtctggtcATCGTGGTCATCATGTGTGCCGTTGGACTGATAACTGTTTGTCAGTGCAGAAAGAGAGTCAAGAAGACAAgACGAGTTATTGACACATCTATATACAATTCCCATCACATCGAAGAGAACACTCCTGATGACAGACCCTATGCCACCATAAAGAAATCCAGTACCATGTCGAATGACAAGAGCCAATCAGAACCAATCTACCAGAACCTACTGTTCAACACTACCCAGGGGGATCCTATATATGGAAATCTATAA

Function

GO: NA

KEGG:

id description
ko03060 Protein export
ko03070 Bacterial secretion system
ko02024 Quorum sensing

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245477.1 True 942 mRNA 0.42 6 26980305 26983587

Neighbor

gene id symbol gene type direction distance location
si:ch211-286b5.4 LOC107709606,LOC107703789,LOC107594247 coding downstream 62690 26912603 ~ 26917615 (-)
nanos3 NA coding downstream 68489 26911058 ~ 26911816 (-)
cc2d1a cc2d1a,LOC107747148,LOC107594251,LOC107598465 coding downstream 73293 26893812 ~ 26907012 (-)
mri1 mri1,LOC107700835,LOC107594353,LOC107703717,LOC107598470 coding downstream 89023 26879067 ~ 26891282 (-)
zgc:158803 zgc:158803,LOC107700834,LOC107747154,LOC107703792,LOC107598467,LOC107709610,LOC107594252,LOC108411937 coding downstream 102155 26872656 ~ 26878150 (-)
LOC122344082 adgre9,LOC107752624,LOC107653768,LOC107558979 coding upstream 30890 27014477 ~ 27024300 (-)
dnajb1b dnajb1b,LOC107573606,LOC107694604,LOC107747146,LOC107703757,LOC107594241 coding upstream 68140 27051727 ~ 27054595 (-)
ndufb7 ndufb7,LOC107573602,LOC107694602,LOC107703772,LOC107594238,LOC107714119 coding upstream 82571 27066158 ~ 27067828 (-)
zgc:136908 zgc:136908,LOC107594236,LOC107703743,LOC108442223,LOC102292797,LOC101483411 coding upstream 85087 27068674 ~ 27076809 (-)
samd1b samd1,LOC107580959,LOC107728687,LOC107599303,LOC108442215,LOC107661838 coding upstream 94912 27078499 ~ 27085950 (-)
G6887 NA non-coding downstream 38098 26933132 ~ 26942207 (-)
G6856 LOC107736226,LOC107598471,LOC107700840 non-coding downstream 114568 26809948 ~ 26865737 (-)
G6870 NA non-coding downstream 215825 26760004 ~ 26764480 (-)
G6874 NA non-coding downstream 222013 26754732 ~ 26758292 (-)
G6873 NA non-coding downstream 231349 26748723 ~ 26748956 (-)
G6923 NA non-coding upstream 10851 26994438 ~ 26994699 (-)
G6926 NA non-coding upstream 23060 27006647 ~ 27007143 (-)
G6927 NA non-coding upstream 23916 27007503 ~ 27007987 (-)
G6929 NA non-coding upstream 25569 27009156 ~ 27009552 (-)
G6933 adgre9,LOC107747176,LOC107694597,LOC107752408,LOC107752624 non-coding upstream 28536 27012123 ~ 27012371 (-)
si:ch211-286b5.5 NA other downstream 60271 26917669 ~ 26920034 (-)
c1h19orf53 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other downstream 177351 26801910 ~ 26802954 (-)
LOC122353745 slc9a3r2,LOC107729606 other downstream 456903 26454250 ~ 26523402 (-)
smdt1b LOC107598503,LOC107700869,LOC107594281,LOC107746113,LOC107703822 other downstream 562408 26416859 ~ 26417897 (-)
G6592 ucp1,LOC107730009,LOC107598545,LOC107703842,LOC107700810 other downstream 844819 26130788 ~ 26135486 (-)
LOC122349164 NA other upstream 957 26984544 ~ 26992582 (-)
LOC122344379 NA other upstream 212651 27196238 ~ 27202628 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other upstream 256737 27240324 ~ 27255067 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other upstream 391730 27375317 ~ 27385079 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other upstream 771195 27754782 ~ 27939452 (-)

Expression


Co-expression Network