LOC122349470 (LOC107578851,LOC107748053)


Basic Information

Item Value
gene id LOC122349470
gene name LOC107578851,LOC107748053
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28486768 ~ 28488502 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245516.1
ATGTTGTGTTTCTTCAGGGTCTCTCAGGAAGCGTCTGTTGGAGAATCGGTGAACATCAGCTGTAAACACATCAGGAATCAAGATCAGAGGTTTTTCTGTAGAGGAGATCAGCCCAATATCTGCATCAGAGACGGAGTTCATGTTTCATCCAGTAACAGGATAAACCACAGATTCTCTCTGACTGAAGAAACCTCTGCTGGAGTCTTTACTGTGAAGATCAGAGACCTGAGAGAAGAGGATTCTGGGAAATACTGGTGTGGAGAAGAGAGTTCTGGGTCCTTCATATTCACTGAAGTTCAGCTACATGTGCCCAGAgTTTCAGGCTTTTCTGTGACAGCTTTGGTTTCTGTGGGTCTGGTCCTGCTGGCTGTGTTTTTAGCGCTGGTgttgttcaaaataaaacgcAGCAGAAAACACGACGTCATCTCGTCAGacaggagagagacagaaggcCACCAAACTGATCGAGAAGAGATTCAGGTCTCAGATCCCGAATCAGCTCATCTCTATTCCACCGTCCAGTCACCCACAATCCCCTCTGATGGGCTCCTGTACTCCTCTGTCAGTTTCAGAAGCACGAAGAGTCTCTCAGTGACTCTTCAGTCAGATTCAGTGAAGACGAGATTCACTGTGAATATGCATCCGTCAATCACAGCATTGGACCAAAATAATATCAGCACTGGATATCAGAACCTGTCGCTGAGAATAATGACCGAGCCGCGTGTAAAAATCGTTCTGTTTTATTAGACTAGTCATTGAGCAGGAAAGAAGCTG

Function

NR:

description
PREDICTED: CMRF35-like molecule 6, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245516.1 True 774 mRNA 0.46 4 28486768 28488502

Neighbor

gene id symbol gene type direction distance location
LOC122356343 LOC107571418 coding downstream 103893 28376999 ~ 28382875 (-)
LOC122360989 NA coding downstream 162752 28321180 ~ 28324016 (-)
LOC122360275 NA coding downstream 165806 28314466 ~ 28320962 (-)
LOC122360767 LOC107723996 coding downstream 208159 28273718 ~ 28278609 (-)
LOC122349362 NA coding downstream 213219 28271569 ~ 28273549 (-)
LOC122349476 NA coding upstream 5194 28493696 ~ 28496147 (-)
LOC122349482 LOC107578851,LOC107748053 coding upstream 7768 28496270 ~ 28506538 (-)
LOC122356751 zgc:194906,LOC107575333,LOC107739961,LOC107576777,LOC107565530,LOC107571418 coding upstream 97315 28585817 ~ 28611362 (-)
LOC122349500 NA coding upstream 109516 28598018 ~ 28603208 (-)
LOC122349510 LOC107577948 coding upstream 116368 28604870 ~ 28616901 (-)
G7521 NA non-coding downstream 55140 28431323 ~ 28431628 (-)
LOC122326209 NA non-coding downstream 69197 28414952 ~ 28417571 (-)
G7516 NA non-coding downstream 76460 28408242 ~ 28410308 (-)
G7480 LOC107724128,LOC107574374,LOC107571134,LOC107742984,LOC107717634,LOC107574376 non-coding downstream 201434 28264397 ~ 28285334 (-)
G7238 NA non-coding downstream 247073 28238856 ~ 28239695 (-)
LOC122326719 NA non-coding upstream 79 28488581 ~ 28489509 (-)
G7535 NA non-coding upstream 182419 28670921 ~ 28672634 (-)
G7541 LOC107575099,LOC107576344,LOC107574587,LOC107576324 non-coding upstream 254942 28743444 ~ 28807706 (-)
G7547 NA non-coding upstream 284852 28773354 ~ 28774166 (-)
G7550 si:dkey-222h21.2,si:ch211-114l13.4,si:ch211-236p5.3,LOC107729025,LOC107575333,LOC107574376,LOC107575359,LOC107659785,LOC107576777,LOC107575507 non-coding upstream 301964 28790466 ~ 28800856 (-)
G7515 slc27a1b,slc27a1,LOC107662711,LOC107560569,LOC107739969,LOC108413363 other downstream 40177 28406182 ~ 28446591 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other downstream 94715 28391039 ~ 28392053 (-)
G7475 NA other downstream 238245 28244128 ~ 28248523 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other downstream 263521 28220899 ~ 28223247 (-)
LOC122349330 LOC107571875,LOC107574524,LOC107703776,LOC107573813,LOC107707718,LOC107732931,LOC107703675,LOC107703672 other downstream 410123 27891901 ~ 28076645 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other upstream 35203 28523705 ~ 28525551 (-)
LOC122324333 NA other upstream 454486 28942988 ~ 28944618 (-)
G7563 ubl5,pin1,LOC107727173,LOC107685032,LOC107571794,LOC107662743 other upstream 561241 29049743 ~ 29132092 (-)
LOC122362981 LOC107662727,LOC107560596,LOC107685031,LOC107722572 other upstream 579480 29067982 ~ 29152545 (-)
LOC122325037 sh2d3a,LOC107662707,LOC107685029,LOC107560576,LOC107727164 other upstream 613184 29101686 ~ 29112734 (-)

Expression


Co-expression Network