LOC122349482 (LOC107578851,LOC107748053)


Basic Information

Item Value
gene id LOC122349482
gene name LOC107578851,LOC107748053
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28496270 ~ 28506538 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245543.1
ACACATGTGGAAACAATCAGAAATGGAGTCGTGATGTTGAGTTAAAGGTTAACAAAAACTCTTCTTCTTGTGGGACGTCTGTTATCGGATCTGCATATATTAGTCAAACAATCACTATCCGCTGTGAATATGATCAAGGGtttaaaaaacacaccaaaGTCTTCTACAGAGTGAACGGAGATCCTGAGCTTGTCCTGaactcttcatcatcatcatcatcatcatcatcatcatcatcatctgagGAGAAGTTCATCCTGACTGACTCTCAGAAAGATCACTTTAATGTAACCATCACAGACGTTTCTGATGGAGGAGTTTATTTATGTGGAGTGGAGAGAGACGGATCAGATAAACCACCTTCAGAAACATCTATCACTTACATCACCTTCATTAAAGAGATTGAGCTGAATGTTCAAAGTCAGATAACTTCTGTCCAGGTCGAGGCCTACATCAGTAAATCAGTCTTCATCACCTGTACATTTCcacagaaattaaaaagaaacaagaaattcTTGCAGAAAGATCCCTCACAGAAGATCCATGATGAAGATCAGAATCAATGGGTCCAACGTAATAAAGTGCACATGTATGATGATACCAGTGAAGGACTTCTGAAGGTTTTTATCAGTGATTTAACTGAAGGTGATGAAGGAACGTACAGATGTGGAGTGAATACTGATAAAGATCATCTGTTCACTGAGATCAAACTGAAGATCAGTACAGctGATGATTTTCCTGCATCAAGCACATCAGCTGTTTTTGGTGAAAGTGTGAAGCTCACCTGTAATTCTACTGAGAAAAACAAGACCTTCAAACACATCTGTAAAGAGAACAAGGAGAAGATCTGTGAGAAGATCAGTTCATCAGAGTTTTCTGAAAGTACAGCAGGAGTTTTCACAGCGATCTTCAGTAATGTGAGGCTGAGAGATGCTGGAGTTTACTGGTGTGGAGAAGAAACCAGAAACAAACATCTGACTTCTGTTTCTCTCACCAATAAACATGAGCTGACTTTATCCATTCCTCCAGTGATTGGACGAGAAGGAGATTCAGTCGACATCAAATGTCCTTATGAGGACACAGAAGAAAGATGTCTGCGCAGTGGAAACtgtttgaaaaaagaaataaaatatctgTGCAAAGGAAAATGTTTCACGAAAGATGCTCAAAATATAATTCGATCAGATGAAGCCCATGTTAAAAAGCCAAATATTTCAGTGAAGGACGACACTGAGCTCTTCACTGTGACCATGACTGAGCTGAGAGCAGAGGATGCTGGGAAATACTGGTGTTCAGTGAAAGACGTGCTTCTTCTTCCTGTTGAGCTCATGATCATCAGGAAGGACGGGGTCTCTCAGGAAGCGTCTGTTGGAGAATCGGTGAACATCAGCTGTAAACACATCAGGAATCAAGATCAGAGGTTTTTCTGTAGAGGAGATCAGCCCAATATCTGCATCAGAGACGGAGTTCATGTTTCATCCAGTAACAGTGAAGACCACAGATTCTCTCTGACTGAAGAAACCTCTGCTGGAGTCTTTACTGTGAAGATCAGAGACCTGAGAGAAGAGGATTCTGGGAAATACTGGTGTGGAGAAGAGAGTTCTGGGTCCTTCATATTCACTGAAGTTCAGCTACATGTGACCAGAGaaatgaccTCTCCTACCACCAAAGAGGAAACAGAAAAGCCTGGCTCCTCTGTGAAGGTTGCTGTTCCTGTGGGATTGCTCCTGCTGGCTCTGGTTACAGCCTTAATCTTATTCAAACTAAAACACAGGAAACACGGGACTGCTTCATCGTCAGAGACAGCTCAAGAGGTGATTCAAGATGCCAGACAGCATTCAGTCTCAGATCCCGAATCAGCTCATCTCTATTCCACCGTCCAGTCACCCACAATCCCCTCTGATGGGCTCCTGTACTCCTCTGTCAGTTTCAGAAGCACGAAGAGTCTCTCAGTGACTCTTCAGTCAGATTCAGTGAAGACGAGATTCACTAGACTGAAGTCAGTCTGGAATGAAGGCCACCGTCGTCTTCATCACTGTTTGTCTGATCTCagGTCAGGGACTTTGTTTCAATGTGATTGGCTGCTCTGGAGGGAGTGTGATGTTCAAGTGCATCGGCGCTGGGTTAATAATGAGAGAATCTCTCTGTATGAcgataaaaacaacagattcTTCACAGTGTTTATCAGGAAGCTCAGCAGAGAGGATGATGGGAAACACACATGTGGAAACAATCAGAAATGGAGTCGTGATGTTGAGTTAAAGGTTAACAAAAtctTCTACAGAGTGAACATAGATCCTGAGCTTGTCCTGaactcttcatcatcatcatcatcaccatcatcatcatcatctgagGAGAAGTTCATCCTGACTGACTCTCAGAAAGATCACTTTAATGTAACCATCACAGACGTTTCTGATGGAGGAGTTTATTTATGTGGAGTGGAGAGAGACGGATCAGATAAACCACCTTCAGAAACATCTATCACTTACATCACCTTCATTAAAGAGATTGAGCTGAATGTTCAAAGTCAGATAACTTCTGTCCAGGTCGAGGCCTACATCAGTAAATCAGTCTTCATCACGTGtacatttccacaaaaattaaaaagaaacaagaaattcTTGCAGAAAGATCCCTCACAGAAGATCCATGATGAAGATCAGAATCAATGGGTCCAACGTAATAAAGTGCACAtctatgatgataataataaaggaCTTCTGAAGGTTTTTATCAGTGATTTAACTGAAGGTGATGAAGGAACGTACAGATGTGGAGTGAATACTGATAAAGATCATCTGTTCACTGAGATCAAACTGAAGATCAGTACAGctGATGATTTTCCTGCATCAAGCACATCAGCTGTTTTTGGTGAAAGTGTGAAACTCACCTGTAATTCTCCTGAGAAACACGGGACCATCAAACACATCTGTAAAGAGAACAAGGAGAAGATCTGTGAGAAGATCAGTTCATCAGAGTTTTCTGAAAGTACAGCAGGAGTTTTCACAGCGATCTTCAGTAATGTGAGGCTGAGAGATGCTGGAGTTTACTGGTGTGGAGAAGAAACCAGAAACAAACATCTGACTTCTGTTTCTCTCACCAATAAACATGAGCTGACTTTATCCATTCCTCCAGTGATTGGACGAGAAGGAGATTCAGTCGACATCAAATGTCCTTATGAGGACACAGAAGAAAGATGTCTGCGCAGTGGAAActgtttgaaaaagaaataa

Function

NR:

description
PREDICTED: CMRF35-like molecule 6, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245543.1 True 3239 mRNA 0.42 17 28496270 28506538

Neighbor

gene id symbol gene type direction distance location
LOC122349476 NA coding downstream 123 28493696 ~ 28496147 (-)
LOC122349470 LOC107578851,LOC107748053 coding downstream 7768 28486768 ~ 28488502 (-)
LOC122356343 LOC107571418 coding downstream 113395 28376999 ~ 28382875 (-)
LOC122360989 NA coding downstream 172254 28321180 ~ 28324016 (-)
LOC122360275 NA coding downstream 175308 28314466 ~ 28320962 (-)
LOC122356751 zgc:194906,LOC107575333,LOC107739961,LOC107576777,LOC107565530,LOC107571418 coding upstream 79279 28585817 ~ 28611362 (-)
LOC122349500 NA coding upstream 91480 28598018 ~ 28603208 (-)
LOC122349510 LOC107577948 coding upstream 98332 28604870 ~ 28616901 (-)
LOC122361856 LOC107575100 coding upstream 107512 28614050 ~ 28626792 (-)
LOC122356986 si:dkey-222h21.3,LOC107659785,LOC107571418 coding upstream 128386 28634924 ~ 28643497 (-)
LOC122326719 NA non-coding downstream 6761 28488581 ~ 28489509 (-)
G7521 NA non-coding downstream 64642 28431323 ~ 28431628 (-)
LOC122326209 NA non-coding downstream 78699 28414952 ~ 28417571 (-)
G7516 NA non-coding downstream 85962 28408242 ~ 28410308 (-)
G7480 LOC107724128,LOC107574374,LOC107571134,LOC107742984,LOC107717634,LOC107574376 non-coding downstream 210936 28264397 ~ 28285334 (-)
G7535 NA non-coding upstream 164383 28670921 ~ 28672634 (-)
G7541 LOC107575099,LOC107576344,LOC107574587,LOC107576324 non-coding upstream 236906 28743444 ~ 28807706 (-)
G7547 NA non-coding upstream 266816 28773354 ~ 28774166 (-)
G7550 si:dkey-222h21.2,si:ch211-114l13.4,si:ch211-236p5.3,LOC107729025,LOC107575333,LOC107574376,LOC107575359,LOC107659785,LOC107576777,LOC107575507 non-coding upstream 283928 28790466 ~ 28800856 (-)
G7551 NA non-coding upstream 286106 28792644 ~ 28801665 (-)
G7515 slc27a1b,slc27a1,LOC107662711,LOC107560569,LOC107739969,LOC108413363 other downstream 49679 28406182 ~ 28446591 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other downstream 104217 28391039 ~ 28392053 (-)
G7475 NA other downstream 247747 28244128 ~ 28248523 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other downstream 273023 28220899 ~ 28223247 (-)
LOC122349330 LOC107571875,LOC107574524,LOC107703776,LOC107573813,LOC107707718,LOC107732931,LOC107703675,LOC107703672 other downstream 419625 27891901 ~ 28076645 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other upstream 17167 28523705 ~ 28525551 (-)
LOC122324333 NA other upstream 436450 28942988 ~ 28944618 (-)
G7563 ubl5,pin1,LOC107727173,LOC107685032,LOC107571794,LOC107662743 other upstream 543205 29049743 ~ 29132092 (-)
LOC122362981 LOC107662727,LOC107560596,LOC107685031,LOC107722572 other upstream 561444 29067982 ~ 29152545 (-)
LOC122325037 sh2d3a,LOC107662707,LOC107685029,LOC107560576,LOC107727164 other upstream 595148 29101686 ~ 29112734 (-)

Expression


Co-expression Network