slc24a2 (slc24a2,LOC107692616,LOC107758891,LOC107665969,LOC107564132,LOC107557960,LOC108441320)


Basic Information

Item Value
gene id slc24a2
gene name slc24a2,LOC107692616,LOC107758891,LOC107665969,LOC107564132,LOC107557960,LOC108441320
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7663335 ~ 7680372 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245590.1
TCTTGATCCATGACAGTGAAACAGCAAGTGCTTGGTGTCCATAAGTCTGTGGGATTCATCTGAAGGATTCACCATCCACGCTAAACTACCAGATGCGAAGAGATTATTATGAGGAAGCCATTAGAGACTCTGGACCCTGTGAGGAATCGGGGAGTACATTGTTCCTGTCAGGTTTAAGTAGAGTGGGTGTGTGATCATGTCCGGCGCTCCATAGATTTCAGACCACCGGACCCCCAAGCTGCCCGTCAAACCATGGATCCCATGTTCCCCAGTGTCAAACTGGGGTCAGATCGCACCCCTCTGCAGCGAAACAGCAAACGTCAACGAGTGCATCATGTCAGGAGGAAACTACGCCCTTCTCGGATTTTTGGTTTTATCCTGAGCATCTCTGCCCTCACATTGTTCCTGTCTTGGAGTGCCTTTACTTTCACTTTGGGCCCATTCCCAAGATGGACGCCACTCACCTCTCTCAACAACCATGATGGACTTGCAGCGCCAGTGCCACACAGAACTGTCCTATCTTCTGACGAAGAGCGCAATGTTTCGGCAGATTCACCCATCGCTATGGCCTCATCCGACGAGCACAGCCAGGGAGACTATCCAGAGGATCTGTTCAGTCTGGAGGAGAGGAGGCAAGGTGCAGTCGTGCTGCATATGTTCGGCATGATGTACATGTTCATTGCCCTCGCTATCGTCTGTGATGAGTTTTTCGTCCCGGCTCTCACCGTAATCACAGAAAAACTGGAGATCTCGGATGACGTCGCGGGCGCCACCTTCATGGCCGCTGGAGGTTCTGCTCCCGAGCTCTTCACCTCCGTGATCGGTGTCTTCGTCTCACACAGCAACGTTGGCATCGGGACCATCGTGGGTTCGGCTGTCTTCAACATTTTGTTCGTGATCGGGATGTGCGCTCTCTTCTCACGCGAGATCCTCAACCTCACCTGGTGGCCTCTGTTTAGAGATGTCACATTTTATATCATTGGACTAATTATGCTTATCGTTTTCTTTCTGGATAACCACATCACCTATTTTGAGAGCATTGGACTGTTACTCTGTTACGCTAGCTACGTCACTTTTATGAAGTACAACGTGACTGTAGAGACTTTAATCAAAACTAAATTACTCAGGAATCAAGTGGACGACATTGAAGCTCCTCCTAAGGTTATCAGTGTGGCAGATGATGAAAATAAACTCTCGGCTAAACCACGCCTCCAGAGAGGAGGAAGCTCCGCCTCCCTACACAACACCCTCATGAGAAACAGCATTTTCCAGCTAATGATTCACACACTCGATCCTCTCAGCGAAGGGAAGTTTAAGGAGAAGGCATCGATTCTACACAAGATTGCAAGAAAAAAGGGACAAGATGAGGCAAATGGTGTTGTTGACAAGAATGTCCCCAACAGCAGTAATGTGGAGGTGGAAGTCACTCCGCCTATGAATGGCAGTGCTGGAGCTGAGGccgaggaggaggaagatgaagacCAGCCTCTGAGCTTGGCGTGGCCAGATACGCCGAGGAAGCAAGCAACATACCTCTTCATCTTCCCCATCGTCTTTCCATTGTGGCTGTCACTGCCAGATGTCCGCAGAGAtACATCAAAAAAGTTCTTTCCGATCACATTTTTGGGATCTATTTCTTGGATTGCTGTTTTCTCTTACATGATGGTGTGGTGGGCTCATCAGGTTGGTGAGACTATTGGAATCACGGAGGAGATCATGGGTTTGACTATTCTAGCGGCTGGCACCTCCATTCCTGATCTCATCACCAGTGTTATTGTTGCCCGCAAGGGTCTCGGCGACATGGCCGTCTCCAGCTCAGTCGGCTCCAACATATTTGACATCACTGTGGGCCTGCCTTTTCCGTGGCTGCTCTTCTCGATCTTGAACGACATGTCTGCAGTGACCGTGAGCAGCAACGGCCTGTTCTGCGCCATCGTTCTGCTCTTCCTCATGCTCCTCTTCGTCATTATCTCCATCGCTGTGTGCAAGTGGAAGATGAGCAAGCTGCTGGGTTTCTTCATGTTCCTGCTCTACTTTGTGTTCCTGGTGGTCAGCGTAATGCTGGAGGACAAGATCATCATCTGCCCGGTCTCCATTTGAATCCTTTATCGTGCACGCCGCTGCTCTTTTTCTGAGAACAGACCCTTATTTATTGGGCATCCGAATGATAACACGAGAGCTTGACCGCAGCTGCGCTGTGGCACCGCTTCTTTATATCCACTGAAGTCTGAGTAGCAGGGCTTTCCAAGCAAGTAGTTTGTTATGGGAAAGTAGTGCAATATTCCGCATGCACTCTCAAAAGCAGTACATAGAGACTTGATGTACTGTagattttagccatttttaataCGCTGTTTGAAGAGGATGGACTTTAAAGAGCATGGAGACACAACATCCAATGAGGAGGCGGACATCTGTGGGGAATGACCACGGACTCAGGAAAGGACCTTTGGtgcaaatatgcattaataattcaatCGCGATCCTGGTACTGTGCTTTAAAGCTCATGATATCATAAGCCTTGTGTTGCACAAtaactttaaaagaaagaagaaacaaagCTTAATATTTGCTTTGGCTGAATGCTGGTCCTTTCTGATTGTTACTTGAGCATTTTCATTCTGAGTATATCATATCTTTTATTGAATAGACTTGTAGACATAGTCAGAAGTCTATTCTCAACCAAATATTATAGGGCTAAACttaagatttatgtttttgaattgCATATGAAAACTTATGTCCATCTAGATTACAGAGTTTTAACAAACTAATACACTTTATGCGATGGCCTACATTTGAGGGTTATTATAGATAACTAAAACAGCAACAATGGTTTCgttgcttgaaataaaataaacgttaactgaaataaaatatgaaacattcttcattttcatttttttttcgacttgttgtactaaaataactaaaactaaaattgaaagttaaaaatatatgccactaaaatggaattttaaaattaaaatggaaataaaaaattactaaaaatattaaaaacactattACAAAGGTACCAGAATAACACATAGTTgctattcaaatataaatgaaacgGGTAAGACTTATATAATAGTATGAACAGAGAatgacaatatatatttatcaatccAGTTTGTTTCAGTCTCATGTATATGAACTAACTGAATATTGCTTTTGTATCATAGCAATCATATTTGAACAATGCCTGAGTAAATTGAATTTGagtaaatactttttgaaaatgattatttattgtacCATCGAATggaagcaaacattttttgagTGCAAAAATCGAACCCGTTTCTTTTCAGTCGAGTATGattgaaaaatatgcattacattaagttcattagttcatgttaaaatttttaaaacttttatatgCAAAGTCAATacataaattttaaatttaggcctatttttttttaaagtgtagaaCTGCAAATAATCAGTATCCAACTCAAAGATTTGGAGCGCTCGTTGTACTATTGAATATAATTAACcacattaaatgttatttgtaaatgcaatattttatatgtttattctCTGGGACTGATGTTTAATTTGGTGCGATTCGTTTGGTGAAAtccaatgaatgaatgaatagtgAAAGACATTCTCTGCTTATAGAGGAGAACCAGTTATCGCTCTCTTTTCACAATCATCTCTTGAGCTGTAGGGTGTCTTCATCACCATCttcagcatcatcatcatcatcatcatctgtctAGACTGCAGTGTTCACGAACTCTTACAGACTCCACTGTTATCAGAGCTGTCAGCTGGTGTTAATGTGAGTAGATGTGTGAGAGAGTTCGGTGCAGAACTCTTTACCGATCATTCATCCCTGCCTGTATCTCTCATTCCTGTCTTAAATCATTTCGGATGATGGAATGAAATTTGTAAGCGAAAGTACTAAAGGAATGGAGCACCCAACAGCTTTGAGGTTGACCGTTATTCTTAGTTAAATACATATGTATCTATCCATTCATAATTTCTGTGTATTTACATGAGTTatggacaaaataaaattatttctaaacttACACTAAAGCATTATTACTTCaagtttgtgtatttatgcattttttcgGCGCTGAACGTTTTTGTGAAGTGAAACAAACATCTTAGTtctttgttattataatattttatgaataatacttttgtgtatttttttaaaggtgt

Function

symbol description
slc24a2 Predicted to enable calcium channel activity and calcium, potassium:sodium antiporter activity. Predicted to be involved in calcium ion transmembrane transport; cellular calcium ion homeostasis; and regulation of synaptic plasticity. Predicted to act upstream of or within calcium ion transport and transmembrane transport. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be integral component of plasma membrane. Orthologous to human SLC24A2 (solute carrier family 24 member 2).

NR:

description
PREDICTED: sodium/potassium/calcium exchanger 2-like

GO: NA

KEGG:

id description
K13750 SLC24A2, NCKX2; solute carrier family 24 (sodium/potassium/calcium exchanger), member 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245590.1 True 4198 mRNA 0.41 10 7663335 7680372

Neighbor

gene id symbol gene type direction distance location
tspan5b tspan5b,tsn5,LOC107692617,LOC107557938,LOC107758863,LOC108441323,LOC105893813,LOC103360687,LOC104950293 coding upstream 2803 7651722 ~ 7660532 (+)
snx8b snx8b,LOC107692712,LOC107758890,LOC107565397,LOC107665942,LOC107723171 coding upstream 39519 7615995 ~ 7623816 (+)
LOC122351150 LOC107692714,LOC107577730 coding upstream 101048 7560832 ~ 7562287 (+)
si:dkey-26i13.8 si:dkey-26i13.8,LOC107723167,LOC107564186,LOC107665939,LOC107557933,LOC107758843 coding upstream 103923 7548351 ~ 7559412 (+)
LOC122350276 eif3b,LOC107692621,LOC107758884,LOC105890332 coding upstream 115655 7540403 ~ 7547680 (+)
saraf LOC107758892,LOC107557959,LOC107665975,LOC107692614 coding downstream 498 7680870 ~ 7684601 (+)
xpa xpa,LOC107758894,LOC107565010,LOC107692611,LOC107557957,LOC107723178 coding downstream 7003 7687375 ~ 7690927 (+)
LOC122343081 LOC107723175,LOC107692611,LOC107565010,LOC107665966,LOC107758893,LOC107557956 coding downstream 16039 7696411 ~ 7704131 (+)
stra6l stra6l,LOC107564087,LOC107665941,LOC107692609,LOC107758896,LOC107557952 coding downstream 51416 7731788 ~ 7738618 (+)
tdrd7a LOC107723197,LOC107692608,LOC107564078,LOC107557954,LOC107665979,LOC107758895 coding downstream 58394 7738766 ~ 7749449 (+)
G1698 NA non-coding upstream 14711 7647889 ~ 7648624 (+)
G1697 NA non-coding upstream 35024 7624948 ~ 7628311 (+)
G1706 NA non-coding upstream 56835 7598267 ~ 7606500 (+)
G1677 NA non-coding upstream 81245 7513555 ~ 7582090 (+)
LOC122330513 NA non-coding upstream 255130 7401131 ~ 7408205 (+)
G1732 NA non-coding downstream 26513 7706885 ~ 7708131 (+)
G1751 NA non-coding downstream 125333 7805705 ~ 7806252 (+)
G1752 NA non-coding downstream 126979 7807351 ~ 7808014 (+)
G1750 LOC107692600 non-coding downstream 127931 7808303 ~ 7809221 (+)
G1753 NA non-coding downstream 130611 7810983 ~ 7811354 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other upstream 511115 7146873 ~ 7152220 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other upstream 803065 6846500 ~ 6860270 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other upstream 817787 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other upstream 881194 6771486 ~ 6782141 (+)
G1414 NA other upstream 1126378 6533502 ~ 6536957 (+)
spink4 LOC107758865,LOC107692710,LOC107723196,LOC107565379 other downstream 39893 7720265 ~ 7721425 (+)
pcdh10a pcdh10a,LOC107751533,LOC107557555,LOC107746446 other downstream 274339 7954711 ~ 7985615 (+)
cxcl8a LOC107714205,LOC107702289,LOC107562973,LOC107692705,LOC107565350 other downstream 926453 8606825 ~ 8607785 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other downstream 942786 8623158 ~ 8634399 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other downstream 1020068 8700440 ~ 8705873 (+)

Expression


Co-expression Network