LOC122349663 (LOC107720543,LOC107693906,LOC107718772,LOC107555189,LOC107701125)


Basic Information

Item Value
gene id LOC122349663
gene name LOC107720543,LOC107693906,LOC107718772,LOC107555189,LOC107701125
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 30401205 ~ 30424282 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245788.1
ATGTCTGGCCATCTGTTCGTGCCATCTtgggttctgcagcaggacaataatacaaaacacaccagcaagtcCACACCTGAATGGCTGAAGAAGaacaaaatgaagactttgAAGTGGCCTAGTCAGAGTCCTGACCTGAATCCTATTGTTACAGTTATGGATGGAGGAGGGATCCTTAGGCAGTCTACTGTCTGGGTGATAGTGCACGTTCAAGATGAGAATGACAATACGCCTGAATTCAAAGAGGCTGTTTACCGCATCAGCCTTCCAGAGCGGGACCGTAACAAACGCGGTGATCCTGTCTACAGAGTCTTTGCTTACGATCGAGATGAAGGGTCCAATGCAGATCTCACCTACAGCATCGTGGATGGAAATGACGACAGCAAATTCGTAATCGATGCCAAGACAGCTATGGTGTCTTCCAGGAAGATGGTCACAGCTGGTGGCTATGATATACTCACAATAAAAGCCGTTGATAATGGGAGCCCTCAGAAGTGGTCGACTGCCCGTTTGCACGTTGAATGGATTCGGAAGCCCGTGCCTTCGCCACTAGCCTTGCGATTTACCACAGCCATTTACAACTTCACAGTGGTGGAAAACGCCAAAGTGTATGAGTCAGTTGGAGTGGTCTCTGTTTGGCAGACAGAAACACCTTTATGGTTCGACATCATTGGTGGAAGAACGTCCCGGGAGATGTTTTATATCCCACAGAGTTCCTGTGGTGGAAACTGTTCATCTGACAGTGGTAACTATAATGGTCCATTTGATATTCAGAGAGGGATGGGGACTATAGTAATAGCCAGACCTCTAGATGCAGAGACACAGTCGCTTTACAACATGACGGTACAGGTGACTGATGGGACAAGCACTACTACCACACAGATTTATATAAAGGTTTTGGACAGCAATGACAACAGTCCTATTTTTTCTGAGCGTACATACGAAGTCTTGGTGTCTGAAGATACACCAGCCGACACTGAGGTCTTGCGTGTCCGGGCCAGGGACAAAGATGAACGGGCGAAGTTGAGCTATTCTATCCATGGCAGCGTTGATCCAGCTAGCATGCGGATGTTTAGGATCAATCCTGGTACTGGTGTCATGTACACAGCAGATCGACTGGATTATGAGATCCGCACTCAGCACATCCTTACTATTATGgtGAAAGATCAAGAATTTCCTTATTATAGAGACCTAGCACGGATTATTGTGACCTTGGAGGATGCCAATGACCAGCCTCCCTTTTTTACTCACACTATTTATGATAGTACAGTGTTTGAGTCTGCCCCACCAGGAACATCAGCTCTGCAGGTGATCGCACTAGACAGAGACTCGGGGAGAAACGGCGAGATAGTTTACTCAATTGATGCAGGTAAACACTTTgtatgtgatgtttttttttttNCAGTAGCCAGAGAGCTCGACCTTACCACTGTGGGTTTTTATACCCTTACTGTAAGAGCCACAGATGGAGGTACTCCGGCGTTAAGTAGCACAACTACTGCTAGGATCGCCGTCTCTCTGTCAGATTTCTCCAGTCCAAAGTTTGCCCAACAAGAATACCAGGCTGAGATCACTGAGAATGTGGCTATTGGGAATTTTGTCATATTGGTCTGTGCAATTAGCCGAACCACACTGATTTATGACATTATACAAGGAAATGATGAAAGGAGGTTTAAAATAAACCGTTATACGGGTGTCATCACGACACAAAGGAATTTTGACTTTGAGATGACCTCTTCATATATGCTGGTGATCCAGGCTGTAAACATGGCTGGGATTGCCTCCAGTGTCACAGTATGCATCCAAGTGGTTGATGAAAATGATaatcctccagtttttcaggAGCTCACATATACAGGGACCATCAGTGAGGCAGCCCCCATCAACAGTGTGGTGATAAGTGAGGATGGAAAACCCCTGGTAATTGAAGCCACAGATGCTGACAAGAATCACAATGCCCTCCTGGTCTTCCAGATTGTGGAGGACACAGCAAAATTGTTCTTTACTGTGGACTCAGGAACAGGCTCTGTCAGAACTATAGCTAAACTGGACTATGAAACAttcagtgctttttatttttctgttaatgtgAGGGACAGTGGCAGGCCTCAGCTGACAGCAGAGAAGCCAGCCAAGGTCCTAATCAGGGTTGTGAACATCAATGACTCTCCCCCTCAGTTCTCACAAGAAGCTTATGACACTGTTTTGCTTCTTCCAACATATGTTGGGGTTGAGGTTCTGAGAGTAGAAGCCACTGATCCGGACATGACCACTGATCTGATGTATTCCTTAGCTGATAGCAACTTGGAGCACTTCGAAATGGATTCATCATCGGGCATACTCACggtcaaaaacaataaactctCCAAAGACCGCTATCGTTTTAATGTCAAAGTGTCAGACGGGCGGTACTTTTGCACAGCACTTGTGACTGTGTTAGTTAGGGAGGCTATGGACAGTGGCCTCCTCTTCAGTCAAACCACATATTCCTCATCTGTACTGGAGAACAGCGTGAACATTACCACTGTGAGCATTGTAAATGCTGTAGGAAACCGTTTAAACGAACCACTAAAGTACACGCTTTTGAATGCAGGCACACGCTTTACAATTCGTCCCACATCAGGAGTCATTCAAACCACAGGAGTCCCTTTCGATCGAGAACAACAGGAACTGTATGAGCTGGTGGTTGAGGCAAATAGAGAATACGACCAGCTGCGAGTTGCTAGAGTAACCATTAGAATAGAAGTTGAGGATGTTAACGACAATGCCCCAGAGTTTCTAGGCCTTCCATATTATGCGGCTGTGCAGGTAGATGCAGAACCTGGCTCATCCATCTTCCAGGTGTCTGCGACAGATTTGGACAAAGGGATAAATGGAGCTGTATATTATGAGCTTAAGGAGAATCATCCGCATTTTGAAGTGAATAAGCTTACTGGGGAGCTTAATCTTAAAAAGGCCTTTGATGCAGACTTGTCCAATGTTGAATATCCGCTGGTGGTCATTGCACGTGATGCTGGCTACCCCTCCCTCTCCACTGTTGTCAAGCTTCCAGTTACAGTTGTGAACAAGGCCATGCCTGTTTTTGACAAGTCATTTTATGGCATATCAGTTAGAGAGGATATTGCAGTGTCAACTCCCATATTATGCATAAATGCCACCAGCCCAGAGGGCCAAAACATTATATACACTATTGTGGAAGGGGATCCTTTCTTCCAATTTGATATTGGCTTTGAGAGTGGTGTGATTAGTGTCATATATCCTTTAGACTATGAAACTACACCCAACTACAGGCTAACCATCAGGTCTACAGACACTCTCACTGGAGCCAGATCCGAAGTAGATGTGGACATAGTTGTGGTAGATGTAAATGACAATGCCCCTGCATTTCGTAATGCATCATACACCAccactttaaaagaaaactcaATGATTGGGTCTAGCGTGTTACAGCTTTGGGCGACAGACAaggattctgaaaaaaatagtataattaGTTATCAAATCCTCTCTGATGGGTTTAATAGCACAGATTACTTTCACATTGACACTACTAGTGGACTCGTGTTAACAGCCCGTCTTCTGGACTATGAACTTACACCGAGCTTTAGCTTTATCGTTAGGGCAACAGACAATGGTTCCCCATCCCAGAGCAGTGAGGTCACGGTCACAGTCTTAGTGAGTGACGTGAATGACAACCCACCATCCTTCAGCCAGCCACTTTATGAAGCTTTTGTGAGTGAACTGGCTCCCCGAGGGCACATTGTGACATGTGTCCAAGCTTCTGATGCAGACAGATCAGATGCAGAGAGTTTGAGGTACAGCATACTCTCTGGAGATGAGAAAATGAACTTTATAATAGACTCTCAGACAGGTGTCATTTCCTTGTCCAGCCAGCGTAGGCAGGGCATACGGCCAGCATACAGCCTCAATGTGTCTGTATCAGATGGGGTCTTCACCAACACTGCACAGATAAACATTCGAGTCATGGGTGCCAACCTTTACAGCCCTGTCTTTAGTCAAAGGTTCTACTTGGCTGAGGTCCGGGAAAATGCACCAGCCGGTACCAAAGTCATTCAAGTGCGTGCCACAGATGAGGACTCTGGGATTTTTGGTCAGATCATGTATTCCTTTATCAATGACCTTGGAAAGGCACAGTTTTACATTGGAGCTGATGGCCTAATAACTACAGCTCAGAAACTCGACAGAGAGAACCCAATAAACAGAGACATTGTGCTAACTGTTATGGCACTTGATGGTGGGGGAAGAGCTTCCTTCTGCACTGTTAGGGTAATTCTTGCTGACGAAAATGACAACGCGCCACGTTTTAGGGCTATGGAATATAGAGTTAGCATAAAAGCTAACGTGCCAATGGGATCACTGGTGACTCAAATCCAAGCTCAGGACCCAGATTCCGGCGATAATGGTAGAGTTAGCTACTCACTGTACAGTGAGGCAAGGCTTCCTCTTGTGGATGTGTTGGAAATTGAACCTGACAGTGGTTGGATGGTCACAAAGGGGAGCATGGCACATCTAAGAGGAACGGTTCTCTCCTTTTTTGTCAAAGCTACTGACGGAGGTGTTCCAGCCAAACATTCCCTTGTGTCTGCATTTATTCATGTCTTACCACCTGATGCAAATGTACCCTCCTTCACCCAACCCCAGTATTCCTACACGGTCCCAGAGGACACATCTGTTGGGACAGTATTGGGATCAGTGTACCTAAGTCCTGGTCAAACAGCTTTCTTTTCTGTGGTGAATGGAGAGACTGGGGAGAGTAACCAGGGTGGGACATTTTTGATTGAGAGAGAAACTGGACTTCTAAGACTTGTTAACCCTCTTGATTATGAACTCATTAACATTTATCGTTTCAAAGTTGCAGCCACCATGAGACAGGCACTAGTTGAATCCATGTCTGTAGTGGATGTAGAAGTCAAGGTGCTGGATGTTAATGACAACAAACCATTATTCGAAACCAGCTCTTATGTTGCCATGGTTATGGAGGGCATGCCTAGGGGTACACGGGTCATCCAGGTACGAGCACTTGACCCTGATTGGGGCTCTAATGGACAGGTTAATTATAGCCTTGGAACAACTTTAAACCAAGAGCAAGACAAAGCTAGTGGCTCTAAATCTGCTGCTGGTGCCATGTTTGTTATTGACAGCAAGACTGGTTGGATCACTACTCTCGGTGACCTGGATCATGAGATGTGTCCATCTTACACCTTCAATGTGGTGGCGTCTGATCTGGGTGAGGGTGTCTCGCTTTCTTCCACAGCAGTAGTGACCATTGCAATCGCAGACGTTAATGACAACCCCCCTACCTTCGAGAGAGCATATTACAGAGGTGCTGTACGAGAGAGTGACCCCCTGGGAGAAGTGGTTTCAGTGCTGAGCACTCGTGATGGGGACAGCTCTGATCAGAATCGGCTTGTCAGCTTCCATATCACAGGAGGAAACCCCAAGGGGGTATTTGCGCTGGCTCCTGTTCAGGGGGAGTGGAAGGTCTTCGTGAAGCGGCCTTTGGACAGAGAGGAGCAGGATCGATACCTGCTCAATATCACAGCCAGCGACGGCCTGTTTGTAACCCGCATAGGCGTGGAGGTCACTGTCATGGATGCCAATGACAACAGCCCCATCTGCAATCAGGCACAATATGAGGCCTCGTTTCCAGAAGATGTGCCTATTAATACTGCTATTCTGACAGTTGGAGCAACAGACTTGGACAGTGGCGTCAACGCAGAAATTCAGTATTCTCTGTTTGGCATTGGCGTTGAAGATTTTTACATGGATGCAAATACTGGTGAACTGAAAACGGCCTCTTTATTGGACCGTGAGAGAACTGCAGGTTATAAGTTGATAGCACAGGCTACAGATGGAGGAGGGCTGTTCTGTCGCTCTGAAATTTCTCTGACCATTCTGGATGTTAATGATAATATACCATCATTTGCCTTCACACGGTTCATGGCGAGTGTATATGAGAGCGCGGCACCCAAGGCCTTGCTCACACGCCTTCGTGCTAATGATCCAGATGAagGGCTAAACAGGAAGATCGTGTACTCGCTTGTTGACTCCGCTGGTGGCATGTTCTCGGCTGACCCATCGTCTGGTGTGGTGATCCTGGAGAAGCCTTTGGACAGAGAGGTGCAAGATTCGTATCAGATCAGAATCAAGGCTACTGACCGATCAGGGGGCGATGGCTCGCTCTCCACAGAGGTGGACCTCACCATCATGGTTCTGGACGTGAACGACAATCCACCTGTGTTTCAAAAGCAAGATTACATGGTCACAGTGCCTGAAGATGTTACTATTGGAACAGAAGTTCTGCGAGTCTTTGCCATGAGTATTGACATTGGAGTGAATGCAGAAATCTACTATAGATTCTTGTCTGGAAATGAGCTGGGGAAGTTTTCCATTGATGGTTCAACAGGCATAATTTCTGTGGCGGATGATCTTGACTATGAGCTCTGCAAGGATTTTTTCCTAAATGTGGAGGCCTTTGATGGTGGAACGCCTCCCTTGAGAGCCGCCACAATAGTGACCATAGAGCTTCTGGATGTCAATGACAACTCGCCTTCATTCAGTGAGGACATCTACAATGTTCTGATCAGCGAGGACGTAGCTATCGGGGAGACGGTCACGAGGCTGTTTGCAGAAGACCTGGACAGTCAAATCAATGGGCGAATCACTTATTCCATTCTGAAAGGGGACCGGGAAAATCAGTTTTGGATCGACCCTGTCACCGGGCTTCTGAAAGTTAACAAGGCACTGGACAGAGAGACGGTCTCCAGCTACTCATTGTCTGTGCAAGCGTTTGACAGCGGGTCACCTGCCAAGTCAACCACTGTGAATGTCAATATCGAGATTGCCGATGTGAATGACAACCCGCCAATCTTCTCTCCTGCGAATGCTTCAGCTGTTATTCAGtttttttttttttttctctcgctgaaCAAGCCTGCAGGAACTACCATCCTGTCACTATCAGTTTCTGATAAGGACTCCTCTAGAAATGGTGCACCTTTTGAGTTTCGCATTGTGTCTGGAAATGAGGGCAATGCTTTCAGTCTGGACCAGAATGGAGAATTACGAACGAGCCGAGTATTTGGTCCTGATGCAACACGAGAGTATATGCTTGAGATACAGGCGCGTGACTCAGGGAAGCCTCGTCTGTCCTCCACATCctttgtgtttgtgcgtgtcaTCGGAGACAGCCTCTTCAAACCTGTGGCCTTCCCACTGGAAATCAACATTGTCATGGCAGCAGATGTGTTTCCTGGCGGGATTATAGGCAAGATCTATGCCACAGACCGAGACGAGAATGATGTTCTGTCTTTCAGTCAGAAATCACAAACAAATAGTCTTTTCAAAATCAACAGACAGGACGGGAAGATTGTGGCACTAAACGGTCTGGAGCCTGGaagATACACCCTAAATGCCACGGTGAGTGACGGGCGGTTCTCTGTGACCGTGGGTGTTAGCGTCCAGGTGGAGCAAGCCACGGATGAGATGGTGCAGAATGCAGTGACTCTGCGTTTCCAAGACCTGTCTCCTGAGGATTTTGTGGGTGTGTACATGGAAGAGCTGAAGAAGGTGCTCCGTACCTCACTGGTTAGTGACGGGACGGGTGCCGTTGAGGGACCAGACCCTCTTCACATCCTGGGAGTGCAGCCACTGAGTCGCTCCAGTCAGCTGGAGGTGCTCCTTGCCGTGGAGACACCAGATGGGGGTTATACGGGTCCAGGAGAGCTGGCTCTCAAGCTGGAGGAGGTGAAGGGTTTTCTAAAGGGAGCGCTGAGGGTGGTCAGCGTCCTGGATCAGAGCTGCTCAGGAGAGCTCGAGTGCGGGGAGAGAGTCTGCGAGCTCACCCTCAGTCTCGACCCCATCGGTTTGGTCACCTACACCACCTCCAGAATGAGCTTTGTTTCTCCACGCTTCAGCAGGAAAGAGATGTGCACGTGTCCAGGAGGAATATGTCCATCTTCTCTGGAGCTCTGTGATGGCCAAACGTGTCCGTCTGACATGCAGTGTGTGCGCAGCGGCCCCGCAGCGCCATCTCTCTGCCAGTGTCTGCCTGATACACTGGACAAGTGCGCAGGACAAACATCTCTGAGCTTTGCAGGGAACAGTTACATCAAATACAGAGTGACGGACGGTGATAGGAGCAGAGACATGAAGCTGGGCTTGAGAATCAGAACGCTCCACGGCCAAGGAGTCATCATGTATACACGCGCTGACCCCTGCACACTGCTCAAGGTCAGAAGGACACACATTATTGCATAG

Function

NR:

description
PREDICTED: protocadherin Fat 3-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245788.1 True 8280 mRNA 0.47 20 30401205 30424282

Neighbor

gene id symbol gene type direction distance location
LOC122349654 dchs2 coding downstream 574 30393908 ~ 30400631 (-)
trnap-ugg_2 NA coding downstream 14339 30386795 ~ 30386866 (-)
trnap-ugg_1 NA coding downstream 15764 30385369 ~ 30385441 (-)
trnae-uuc NA coding downstream 16404 30384731 ~ 30384801 (-)
trnar-ucg_114 NA coding downstream 20012 30381121 ~ 30381193 (-)
gyg2 LOC107552233,LOC107746642,LOC107691603 coding upstream 429754 30854036 ~ 30861383 (-)
cd99 LOC107746638,LOC107654756,LOC107714307,LOC107598750 coding upstream 438097 30862379 ~ 30873365 (-)
trnar-ucu_5 NA coding upstream 438588 30862870 ~ 30862961 (-)
creb1a creb1a,creb1b,LOC107714305,LOC107757658,LOC107691602,LOC107552236 coding upstream 512116 30936398 ~ 30941726 (-)
cldng LOC107748278,LOC107691622,LOC107580989,LOC107552232,LOC107654796 coding upstream 548507 30972789 ~ 30974161 (-)
G7824 NA non-coding downstream 110168 30290710 ~ 30291037 (-)
G7822 NA non-coding downstream 116855 30283969 ~ 30284350 (-)
G7817 NA non-coding downstream 157881 30195990 ~ 30243324 (-)
G7813 NA non-coding downstream 223257 30169979 ~ 30177948 (-)
LOC122351882 NA non-coding downstream 278505 30122289 ~ 30122700 (-)
G7864 NA non-coding upstream 39041 30463323 ~ 30523613 (-)
G7866 NA non-coding upstream 134968 30559250 ~ 30559552 (-)
G7874 NA non-coding upstream 232174 30656456 ~ 30661467 (-)
G7988 NA non-coding upstream 418696 30842978 ~ 30843402 (-)
G7989 LOC107746637,LOC107691606 non-coding upstream 419435 30843717 ~ 30844170 (-)
G7816 NA other downstream 203357 30192201 ~ 30197848 (-)
G7648 LOC107662685,LOC107678949 other downstream 924867 29426098 ~ 29476338 (-)
G7655 LOC107662685 other downstream 925817 29452759 ~ 29475388 (-)
LOC122354733 LOC107678949,LOC107566822,LOC107713175,LOC107662686,LOC107758373,LOC107574162,LOC107662685 other downstream 966992 29411107 ~ 29434213 (-)
G7569 gtf3c1,LOC107678316 other downstream 1090607 29301807 ~ 29310598 (-)
G7868 NA other upstream 205952 30630234 ~ 30630505 (-)
G8009 NA other upstream 519216 30943498 ~ 30957486 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 1107787 31532069 ~ 31537416 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 1125904 31550186 ~ 31554035 (-)
LOC122349741 NA other upstream 1198392 31622674 ~ 31626684 (-)

Expression


Co-expression Network