LOC122349700



Basic Information


Item Value
gene id LOC122349700
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 31372496 ~ 31378539 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>XM_043245847.1
atgaatttcttGTGTTCACATCCTCTAGATCCCAGCTGTGTGTCCATGAAGAGTGACCAGTCAATGGACCCTCCACCTAAACTCAGCGGACACAATGAAAATTCTAGCCGTGACCCTGCAGAAGATCTCAAGACATTCAGATCAAATCTGAGGGAGAAATTTGAGTGTCTTCATGAGGGAACAGTGATTCAGGGAAACCCAACACTCCTGAATGAGATCTACACAGAGCTTTAcatcacagagagtgagagtggAGAGATCAATAATGAGCATGAGGTGAGACAGATTGAGACACGATCCAGGAGAGAAACAACAGAGGACACTCCCATCAAATGCAGTGACATCTTCAGACCTTTACCCGAACAAGACAAAGCCATCAGTACTGTGCTGACAAAAggagtcgctggcattggaaaaacagtctctgtgcagaagttcatcctggactgggccGAAGGGAAAGAGAATCAGGACGTCCAGCTcatatttccacttcctttcagagAACTCAATCTGATGAAGGACAAAACTCTCAGTCTTTCAGATCTTCAGCATATCTTCTTCcctgaaacaaaagaaattaaaatatccAGTGATGAGTATAAAatgttgttcatctttgatggtctggacgaGTGTCGTCTTCCCTTGAACTTTGACAGCAATGAGACTCTACAGGACGTGACCAAAGAGACATCAGTGGATGTGCTACTGACGAACCTGATTTTGGGGAATCTGattccctctgctctcatctggatcacctccagaccagcagcagctgatctcGTCCCCTCTGAGCGCGTCCAGCGAGTGACAGAGGTACGAGGCTTCAATGATCCGCAGAAGGAGGAGTACTTCAGAAAGAGGATCAGTGATCAGAGTCTGGCCGATAGGATCATCTCACATCTGAAGTCCTCCAGGAGCCTCttcatcatgtgtcacatcccagtcttctgctggatctcagccactGTTTTAGAGAAGATCTTGAGTCAAGCAGAGAGTGGAGAGATTCCCAAGACTCTCAcccaaatgtacacacacttcctgatcctTCAGACCAACATCAAACATGGCAAGGACTATGAAAGGAAAGCGAAGGATGAAGACATGATTCTCAAACTGGGAAAAGTGGCTTTCCAGCAACTTGTGAAAGGAAATCTGATCTTCTATGAGGAAGACCTGAGAGAGTGTGGCATTGATGAGACTGAAGCATCGGTTTACTCAGGATTGTGTACTgagatcttcagagaggagtTGGGCTGGTATCAGGGAAAAGTCTTCTGCTTTGTTCATCTGAGCCTTCAGGAGCATCTCGCAGCTCTTTATGTGCTGTTTACATTTCTGCTGGACAAGAGAGATGTGCTGAATGAAAACCTCAGCTCAAAACATGCACATGAGTTCACGTGTCACACAATATCTGACCTGCATCAGAGAGCAGTGGACAAGACTTTACAGAGTAAGAATGGACATCTGGACCTTTTCCTCCGATTTCTTCTAGGTCTTTCGCTGAAGTCCAATCAGACACTCCTGAAATATCTTCTGACACACACTGGAAACATCCCATACAGTGAAGAGAAAACCAttgattacattaaaacaagaaTAAGAATGAATCCCTCACCAGAGAAATCCATCATTCTGTTTCACTGTTTAAATGAACTGGGTGACCATTCTCTGGTGAATGAAGTACAGGAGTATCTTAGATCTGGAGGTCTGTCAAACACCAGACTGTCCTCGTCACAGTGGTCAGCTGttatctttgttttgctgaccTCGGAGCAGTTGGATGAATTTGATTTGAGTAAATACATAAGCAGAGAGCAAAACGAAATCCACACAACACCTGATGAACTTCTTCTGAAGCTCTTGCCTGTCGTTGAAGGCTCTAGATCAGCTCAGTTAAGTTGTTGTAACatcacagatgaaggttgtgctgctctgagttcagctctgagatcaaaatCCTCCCATCTGAGAGAAATGAATCTGTCTGAGAATAATTTAAGAGATGCAGGTCTGAAGCTGATCTCTGAAGGTCTGAACGATCCTCGCTGTAAACTGGAAAAACTGTGGTTGAGGGAGTGTAGAgtcacagatgaaggttgtgctgctctgagatcagctctgagatcaaacacCTCACTTCTGAGTGAACTGGATCTGACTGGGAATAAACTAGGAGATGCTGGTCTGAAGCTGatctctgaaggactgaaggaTCCTCACTGTAAACTGGAGACACTGTGGTTGTTTAATTGTGGCATCACAGCtgaaggttgtgctgctctgaGTTCAGCTCTGAGGTCAAACTCATCACATCTGACAGAACTGAGTCTGTCTAGGAATAATCTAAGAGATGCAGGTCTGAAGCTGATCTCTGAAGGACTGAATGATCCTCACTGCAAACTGGAGATATTGTGGTTGAGTTATTGTGGCGTCACAGATAaaggttgtgctgctctgagttcaaacccctcacatcTAAGAGAACTAGATCTGGTTGGGAATAAACTAGGAGAGTCAAgtgtgaagctgctctctgcaTTAAAAGAGGATACACATTATAAACTGGAGACACTGCAGTAAGTATCAGTGATTAATATACAGTCTCACATAATAATGTCAT

Function


GO:

id name namespace
GO:0005524 ATP binding molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_043245847.1 True 2632 mRNA 0.44 6 31372496 31378539

Neighbor


gene id symbol gene type direction distance location
cldng LOC107748278,LOC107691622,LOC107580989,LOC107552232,LOC107654796 coding downstream 398335 30972789 ~ 30974161 (-)
creb1a creb1a,creb1b,LOC107714305,LOC107757658,LOC107691602,LOC107552236 coding downstream 430770 30936398 ~ 30941726 (-)
cd99 LOC107746638,LOC107654756,LOC107714307,LOC107598750 coding downstream 499131 30862379 ~ 30873365 (-)
trnar-ucu_5 NA coding downstream 509535 30862870 ~ 30862961 (-)
gyg2 LOC107552233,LOC107746642,LOC107691603 coding downstream 511113 30854036 ~ 30861383 (-)
LOC122349710 patl1,LOC107594300,LOC107657997,LOC107703847,LOC107598520 coding upstream 5801 31384340 ~ 31393086 (-)
tacr3l tacr3l,LOC107570821,LOC107657987,LOC107757062,LOC107703855,LOC107746088,LOC108411976 coding upstream 183442 31561981 ~ 31572621 (-)
cldnd1b cldnd1b,LOC107746097,LOC107757065,LOC107570824,LOC107703857,LOC107657989 coding upstream 212598 31591137 ~ 31595295 (-)
glb1 glb1,LOC107746116 coding upstream 217292 31595831 ~ 31602441 (-)
LOC122327810 LOC107747443 coding upstream 255862 31634401 ~ 31661603 (-)
G8062 NA non-coding downstream 4268 31360119 ~ 31368228 (-)
G8072 NA non-coding downstream 37354 31334610 ~ 31335142 (-)
G8054 NA non-coding downstream 74655 31204027 ~ 31297841 (-)
LOC122350699 NA non-coding downstream 130450 31240243 ~ 31242046 (-)
G8042 NA non-coding downstream 192335 31177794 ~ 31180161 (-)
G8066 NA non-coding upstream 87082 31465621 ~ 31467033 (-)
G8086 NA non-coding upstream 89756 31468295 ~ 31470517 (-)
G8084 NA non-coding upstream 100648 31479187 ~ 31480344 (-)
G8074 NA non-coding upstream 113758 31492297 ~ 31495910 (-)
G8093 NA non-coding upstream 169656 31548195 ~ 31548754 (-)
G8009 NA other downstream 415010 30943498 ~ 30957486 (-)
G7868 NA other downstream 741991 30630234 ~ 30630505 (-)
G7816 NA other downstream 1174648 30192201 ~ 30197848 (-)
G7648 LOC107662685,LOC107678949 other downstream 1896158 29426098 ~ 29476338 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 153530 31532069 ~ 31537416 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 171647 31550186 ~ 31554035 (-)
LOC122349741 NA other upstream 244135 31622674 ~ 31626684 (-)
LOC122349752 NA other upstream 248364 31626903 ~ 31630020 (-)

Expression



Co-expression Network