LOC122350202


Basic Information

Item Value
gene id LOC122350202
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28218282 ~ 28220347 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246520.1
AGAAATATGCGAGGActttaaagaagaagaagaagaagttccACAGTTCTCACTGATTTTCTCCGGTCCTAGGTGTTACATGTGATACCTCTTTAaaagcgcgcgcgcgcgcacacacacacacacacattttacatacatacatacacacacacacacacacacaatgaggCGGGGACATTTTGTAATCTAAAGGAAAAGGCAGAATGCGCGAAAGCGAAACGATCCGAAGCGAGGAAACAGGAAGACGTTTAACTATCCACAGTGATACCAAATGGCTGCAGTGATTTTTGACGTACTTTCTGAGCTGCTGGATGCGGAGTTTAAAGAGTTCAAGTGGCGTCTGTCAGACCATGGGACACTGGACAGCTCAAGTATTGCTCGTGGAAAGCTGGAGCACGCTAATCGCCACGAGGTCGTGGATCTCATAGTGCAGCAGTACACTGGCTCAGACGCCGGGAGGATTGCTATCAGAGCGCTGCGCCAAATCAAGCAAAATGAGCTCGCTGATCAACTGAAAGCAAAGCTTCAGGAAGTTTCAGAGGAGGGTTCTGCTGAAGATGGAGCTTCATCCGGTGCAGCGGCTGCAAACACTTCAAGGACAGGGGTTACGATGAACATACAAGCCTCCGATGGAGGGAACGTAAATGCCCCTGTTCTTCAGAACGGTGTTTATCACGGCTCAGTGACATTCAATTAACGCTCAAGGAGCTATCTGTCTTATAACAATGATTTTAAGGGCTCAAATGAAGATACAGCACAGAGAAAGTCtacagtttttgaatccatATTATGTTTGACAGCAAATTATATGCcttaaatatgatataattaaaatatgcctTTATCtcagaattaaataaatctacTTCTCATAAAGAAA

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246520.1 True 883 mRNA 0.44 3 28218282 28220347

Neighbor

gene id symbol gene type direction distance location
LOC122347302 NA coding downstream 25519 28191706 ~ 28192763 (-)
LOC122347290 NA coding downstream 30344 28186723 ~ 28187938 (-)
LOC122352802 LOC107739960,LOC107707702,LOC107683702,LOC107575281 coding downstream 156192 28057106 ~ 28062090 (-)
LOC122349325 LOC107576205,LOC107713396 coding downstream 165782 28050085 ~ 28052500 (-)
LOC122349314 LOC107571875,LOC107575339 coding downstream 171371 28045169 ~ 28046911 (-)
LOC122349362 NA coding upstream 51222 28271569 ~ 28273549 (-)
LOC122360767 LOC107723996 coding upstream 53371 28273718 ~ 28278609 (-)
LOC122360275 NA coding upstream 94119 28314466 ~ 28320962 (-)
LOC122360989 NA coding upstream 100833 28321180 ~ 28324016 (-)
LOC122356343 LOC107571418 coding upstream 156652 28376999 ~ 28382875 (-)
G7182 NA non-coding downstream 103355 28109682 ~ 28114927 (-)
G7127 NA non-coding downstream 246783 27924414 ~ 27971499 (-)
G7157 NA non-coding downstream 253648 27961915 ~ 27964634 (-)
G7156 NA non-coding downstream 260283 27956825 ~ 27957999 (-)
G7139 LOC107737592,LOC107703675,LOC107758473,LOC107575341,LOC107574264 non-coding downstream 370104 27847715 ~ 27848178 (-)
G7238 NA non-coding upstream 18509 28238856 ~ 28239695 (-)
G7480 LOC107724128,LOC107574374,LOC107571134,LOC107742984,LOC107717634,LOC107574376 non-coding upstream 44050 28264397 ~ 28285334 (-)
G7491 NA non-coding upstream 88557 28308904 ~ 28803891 (-)
G7492 NA non-coding upstream 90777 28311124 ~ 28747639 (-)
G7516 NA non-coding upstream 187895 28408242 ~ 28410308 (-)
LOC122349330 LOC107571875,LOC107574524,LOC107703776,LOC107573813,LOC107707718,LOC107732931,LOC107703675,LOC107703672 other downstream 141637 27891901 ~ 28076645 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other downstream 278830 27754782 ~ 27939452 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other downstream 833203 27375317 ~ 27385079 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other downstream 963215 27240324 ~ 27255067 (-)
LOC122344379 NA other downstream 1015654 27196238 ~ 27202628 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other upstream 552 28220899 ~ 28223247 (-)
G7475 NA other upstream 23781 28244128 ~ 28248523 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other upstream 170692 28391039 ~ 28392053 (-)
G7515 slc27a1b,slc27a1,LOC107662711,LOC107560569,LOC107739969,LOC108413363 other upstream 185835 28406182 ~ 28446591 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other upstream 303358 28523705 ~ 28525551 (-)

Expression


Co-expression Network