LOC122350276 (eif3b,LOC107692621,LOC107758884,LOC105890332)


Basic Information

Item Value
gene id LOC122350276
gene name eif3b,LOC107692621,LOC107758884,LOC105890332
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7540403 ~ 7547680 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246633.1
GAGAGATCGTAGCTGCGCAGTCCGGAGGCAGCCAGCATCAACATTATCTGACGCATTTCTACTAGTTGTGTAACTTAAAGAAAACACCCTGCATCATATTCAGCAATTTCGGCTCGTCAAATGCAGGATACGGTAAATATGGCGGCTGAATCGGAATTTGATGAAGAAGAGGAGCCTTCGTTCAGCGATCCGGAGGATTTTGTGGATGACATCGATGATGAAGAGTTGTTGGAGGATGTTTTGAGGGAGAGACCTTTGGAGGCTGATGGGATTGATTCGGTGGTGGTGGTGGACAACGTTCCCCAAGTGGGACCTGAACGTCTGGAGAAACTGAAAAACGTGATCCATAAAATCTTCTCCAAGTTTGGAAAGATCACGAATGAATTTTACCCAGAAGCGGCCGGGATGACAAAAGGGTATATCTTTCTGGAGTACGCTTCCCCTAACCAGGCTCTGGAAGCTGTTAAGAATGCAGATGGCTACAAGCTGGACAAACAGCACACATTCAGAGTCAATCTGTTCACCGATTTTGATAAgtaCATGAATATCAGTGACCAGTGGGAAACCCCTGAAAAACAGCCATTTAAAGACTTTGGCAACATGAGGCACTGGCTCGAGGATCCGGACTGTCGTGATCAATACAGCGTGATATATGAATCAGGAGAGCGAACCGCCATATTTTCCAATGACCCGAAGGAACCGATCCTGGTTGAAGAGAGAGCTCGCTGGACAGAGACTTACGTCCGCTGGTCACCTAAGGGCACTTATCTGGCCACCTTTCATCAGAGAGGAATTGCATTGTGGGGTGGAGAGAAGTTCAAGCAGATACAGAGATTCAGCCACCAGGGCGTCTCTCTCATTGACTTCTCCCCATGCGAGAGGTATGTGGTGACTTTCAGCCCACTGATGGACACTAAAGAGGACCCTCAGGCCATCATCATCTGGGACATCCTGACCGGACAGAAAAAACGTGGCTTCCATTGTGAGAGTTCGGCACACTGGCCTATTTTTAAATGGAGTCAAGATGGAAAGTTCTTTGCCAGAATGACACAAGACACTCTAAGCATTTATGAAACCCCGTCAATGGGTCTGCTAGATAAGAAGAGTTTGAAAATAAGTGGAATAAAAGATTTTTCTTGGTCCCCGGGAGACAACATCATTGCGTTTTGGGTACCGGAAGACAAGGACATTCCAGCCAGGGTGACGCTCATGCAGTTCCCATCCCGTTTAGAGATTCGGGTGCGGAATCTTTTCAACGTGGTGGACTGCAAGCTTCATTGGCAACGCCAGGGTGACTACTTGTGTGTAAAGGTGGACCGGACACCCAGAGGGacccagGGTGTCGTCACAAACTTTGAGATTTTCCGcatgagagagaaacaggttccTGTTGATGTGGTAGAGATGAAAGAAAGCATCATTGCATTTGCCTGGGAGCCCAACGGCAATAAGTTTGCAGTGCTACACGGAGAATCACCCAGAATAAACGCCTCATTTTACCACGTTAAAAGCAATGGCAAGATCGATCTCATCAAGATGTTTGATAAACAGCAGGCTAACAGTATCTTTTGGAGTCCTCAAGGTCAGTTCATGGTACTGGCAGGACTGCGGAgtaTGAATGGAGCGCTTGCATTTGTGGACACGTCAGATTGCACCATTATGTATATCGCGGAGCATTACATGGCTTCTGATGTGGAATGGGACCCTACAGGCAGATACGTGGTGACTTCTGTTTCCTGGTGGAGCCACAAGGTGGACAATGCATACTGGCTTTGGACGTTCCAGGGACGTCTTCTGCAAAAGAACAACAAAGATCGATTCTGCCAGTTGCTATGGAGACCACGGCCTCCTACATTACTCAGTCAAGAGCAGATTAAGGCAATTAAGAAGGACCTCAAGAAGTACTCAAAAATCTTTGAGCAAAAGGACAGACTGAGCCAGTCAAAGGCTTCTAAGGAGTTAGTGGATAAGCGTCGTTTGATGATGGAAGAATACAGGCGGTACAAAGACAGTGCCATTGAGCTTTACAACCAACAGAGGGAGCTGCGCCTTCAGCTCAGAGGAGGTGTGGACACAGATGAGCTGGACAGTAATGTTGAGGACTGGGAAGAGGAAACCATTGAGTTCTttatcagtgaagacatcatTAATCTTGGAGACCTGGAGTAGACGTTTGCTGGAGTAGAAAGCACTGTTGTTTCCATCGGTGAGAGAAAAAACTCACCCCCAGAGAGTGCCACAGGTCCTTTGTATGTGCTCAAGTGCTGTGTATGAGAGACACACTAAGTATGCTTACATGCTCTGGGATATATCGAGCTAGGTTGAGCAAAAAAGTTCAAAGAAGTGGAATTCTTTCATAATCAAAGTATGGAATTCTTTGCGCAACTGGGCTGATATGATTCGTCGGACTAAATAATTTAGAGGACATTACTAATTATTTAGTCTGACTAAAGCCAAAAAGCATGTAAACACACTTGATGATTCACATTCAATGTATATTCCTGATGAAAGGGATGTTGTTTGATTCTAATATGAATTTTAAGCAAGAGCTCATATTCTTCATAACCTCCCTTCATACGATTTTCTTGAAGGAGCATGGAGTGAAAGGCAGTGGTTTATCATTTGCTGTCCTTACTGACAGAGCAGTAAGGACATGATACTTCTCAACCAATAGTACCGTTTTGTGGGTTATCAATTCTCAAAAGAAAACTTGATTGATTCAAGAGAGAATTTCTTTTTGTACTGTGGTATGGTCTTTTGTATgagaacattttgtttaattgggaaatcattcaaaatgcatttttcccaCCATCATTCCAATGGAAATTACACATCGTTTGCATGGAAACTTCAGCCATGACTTGGCATGCTGATGTGCAGCAGTATCAGGAAGAGTCATGTCAAATCCAAGCTgctcttatttaaaaataatttttaaattataaatttgaacacagtaaagacattataACATTCATTAGCCAAGTGTAATTTTTGGCATTAGCAAGAATGAGTCTTTTGCAAGTACcatcacattttttatatgatcattttctttgtatttaatttaatttaacttgaatTTCCCACAAACTCCCTACTAACCTACAAAATTGTGTATGtttaatcatataataaatgtaaatgacttGA
>XM_043246642.1
TCGGTGGTGGTGGTGGACAACGTTCCCCAAGTGGGACCTGAACGTCTGGAGAAACTGAAAAACGTGATCCATAAAATCTTCTCCAAGTTTGGAAAGATCACGAATGAATTTTACCCAGAAGCGGCCGGGATGACAAAAGGTGTCAAATGTTCTCAGGTATATCTTTCTGGAGTACGCTTCCCCTAACCAGGCTCTGGAAGCTGTTAAGAATGCAGATGGCTACAAGCTGGACAAACAGCACACATTCAGAGTCAATCTGTTCACCGATTTTGATAAgtaCATGAATATCAGTGACCAGTGGGAAACCCCTGAAAAACAGCCATTTAAAGACTTTGGCAACATGAGGCACTGGCTCGAGGATCCGGACTGTCGTGATCAATACAGCGTGATATATGAATCAGGAGAGCGAACCGCCATATTTTCCAATGACCCGAAGGAACCGATCCTGGTTGAAGAGAGAGCTCGCTGGACAGAGACTTACGTCCGCTGGTCACCTAAGGGCACTTATCTGGCCACCTTTCATCAGAGAGGAATTGCATTGTGGGGTGGAGAGAAGTTCAAGCAGATACAGAGATTCAGCCACCAGGGCGTCTCTCTCATTGACTTCTCCCCATGCGAGAGGTATGTGGTGACTTTCAGCCCACTGATGGACACTAAAGAGGACCCTCAGGCCATCATCATCTGGGACATCCTGACCGGACAGAAAAAACGTGGCTTCCATTGTGAGAGTTCGGCACACTGGCCTATTTTTAAATGGAGTCAAGATGGAAAGTTCTTTGCCAGAATGACACAAGACACTCTAAGCATTTATGAAACCCCGTCAATGGGTCTGCTAGATAAGAAGAGTTTGAAAATAAGTGGAATAAAAGATTTTTCTTGGTCCCCGGGAGACAACATCATTGCGTTTTGGGTACCGGAAGACAAGGACATTCCAGCCAGGGTGACGCTCATGCAGTTCCCATCCCGTTTAGAGATTCGGGTGCGGAATCTTTTCAACGTGGTGGACTGCAAGCTTCATTGGCAACGCCAGGGTGACTACTTGTGTGTAAAGGTGGACCGGACACCCAGAGGGacccagGGTGTCGTCACAAACTTTGAGATTTTCCGcatgagagagaaacaggttccTGTTGATGTGGTAGAGATGAAAGAAAGCATCATTGCATTTGCCTGGGAGCCCAACGGCAATAAGTTTGCAGTGCTACACGGAGAATCACCCAGAATAAACGCCTCATTTTACCACGTTAAAAGCAATGGCAAGATCGATCTCATCAAGATGTTTGATAAACAGCAGGCTAACAGTATCTTTTGGAGTCCTCAAGGTCAGTTCATGGTACTGGCAGGACTGCGGAgtaTGAATGGAGCGCTTGCATTTGTGGACACGTCAGATTGCACCATTATGTATATCGCGGAGCATTACATGGCTTCTGATGTGGAATGGGACCCTACAGGCAGATACGTGGTGACTTCTGTTTCCTGGTGGAGCCACAAGGTGGACAATGCATACTGGCTTTGGACGTTCCAGGGACGTCTTCTGCAAAAGAACAACAAAGATCGATTCTGCCAGTTGCTATGGAGACCACGGCCTCCTACATTACTCAGTCAAGAGCAGATTAAGGCAATTAAGAAGGACCTCAAGAAGTACTCAAAAATCTTTGAGCAAAAGGACAGACTGAGCCAGTCAAAGGCTTCTAAGGAGTTAGTGGATAAGCGTCGTTTGATGATGGAAGAATACAGGCGGTACAAAGACAGTGCCATTGAGCTTTACAACCAACAGAGGGAGCTGCGCCTTCAGCTCAGAGGAGGTGTGGACACAGATGAGCTGGACAGTAATGTTGAGGACTGGGAAGAGGAAACCATTGAGTTCTttatcagtgaagacatcatTAATCTTGGAGACCTGGAGTAGACGTTTGCTGGAGTAGAAAGCACTGTTGTTTCCATCGGTGAGAGAAAAAACTCACCCCCAGAGAGTGCCACAGGTCCTTTGTATGTGCTCAAGTGCTGTGTATGAGAGACACACTAAGTATGCTTACATGCTCTGGGATATATCGAGCTAGGTTGAGCAAAAAAGTTCAAAGAAGTGGAATTCTTTCATAATCAAAGTATGGAATTCTTTGCGCAACTGGGCTGATATGATTCGTCGGACTAAATAATTTAGAGGACATTACTAATTATTTAGTCTGACTAAAGCCAAAAAGCATGTAAACACACTTGATGATTCACATTCAATGTATATTCCTGATGAAAGGGATGTTGTTTGATTCTAATATGAATTTTAAGCAAGAGCTCATATTCTTCATAACCTCCCTTCATACGATTTTCTTGAAGGAGCATGGAGTGAAAGGCAGTGGTTTATCATTTGCTGTCCTTACTGACAGAGCAGTAAGGACATGATACTTCTCAACCAATAGTACCGTTTTGTGGGTTATCAATTCTCAAAAGAAAACTTGATTGATTCAAGAGAGAATTTCTTTTTGTACTGTGGTATGGTCTTTTGTATgagaacattttgtttaattgggaaatcattcaaaatgcatttttcccaCCATCATTCCAATGGAAATTACACATCGTTTGCATGGAAACTTCAGCCATGACTTGGCATGCTGATGTGCAGCAGTATCAGGAAGAGTCATGTCAAATCCAAGCTgctcttatttaaaaataatttttaaattataaatttgaacacagtaaagacattataACATTCATTAGCCAAGTGTAATTTTTGGCATTAGCAAGAATGAGTCTTTTGCAAGTACcatcacattttttatatgatcattttctttgtatttaatttaatttaacttgaatTTCCCACAAACTCCCTACTAACCTACAAAATTGTGTATGtttaatcatataataaatgtaaatgacttGA

Function

symbol description
eif3b Enables RNA binding activity. Contributes to translation initiation factor activity. Involved in several processes, including IRES-dependent viral translational initiation; translational initiation; and viral translational termination-reinitiation. Located in extracellular exosome. Part of eukaryotic translation initiation factor 3 complex.

NR:

description
PREDICTED: eukaryotic translation initiation factor 3 subunit B-like

GO: NA

KEGG:

id description
K03253 EIF3B; translation initiation factor 3 subunit B

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246633.1 True 3156 mRNA 0.43 18 7540403 7547680
XM_043246642.1 False 2896 mRNA 0.43 17 7541621 7547680

Neighbor

gene id symbol gene type direction distance location
knstrn knstrn,LOC107723170,LOC107564216,LOC107758858,LOC107586895 coding upstream 225966 7311397 ~ 7314437 (+)
LOC122330119 LOC107723198,LOC107692626,LOC107564241,LOC100334711 coding upstream 355121 7181245 ~ 7185282 (+)
atp1b1b LOC107723190,LOC107692627,LOC107564268,LOC107665977,LOC107758877,LOC107586865 coding upstream 371056 7162308 ~ 7169347 (+)
dachb dachb,LOC107665972 coding upstream 478403 7029660 ~ 7062000 (+)
pip4p1b tmem55bb,LOC107723169,LOC107665981,LOC107590777,LOC107565103,LOC107721780 coding upstream 532549 7003467 ~ 7007854 (+)
si:dkey-26i13.8 si:dkey-26i13.8,LOC107723167,LOC107564186,LOC107665939,LOC107557933,LOC107758843 coding downstream 671 7548351 ~ 7559412 (+)
LOC122351150 LOC107692714,LOC107577730 coding downstream 13152 7560832 ~ 7562287 (+)
snx8b snx8b,LOC107692712,LOC107758890,LOC107565397,LOC107665942,LOC107723171 coding downstream 68315 7615995 ~ 7623816 (+)
tspan5b tspan5b,tsn5,LOC107692617,LOC107557938,LOC107758863,LOC108441323,LOC105893813,LOC103360687,LOC104950293 coding downstream 104042 7651722 ~ 7660532 (+)
slc24a2 slc24a2,LOC107692616,LOC107758891,LOC107665969,LOC107564132,LOC107557960,LOC108441320 coding downstream 115655 7663335 ~ 7680372 (+)
LOC122330513 NA non-coding upstream 132198 7401131 ~ 7408205 (+)
LOC122336506 NA non-coding upstream 218634 7318202 ~ 7321769 (+)
G1577 LOC107723159,LOC107723172,LOC107565422,LOC107758837,LOC107590752,LOC107758876 non-coding upstream 396662 7135796 ~ 7143741 (+)
G1565 LOC107590778 non-coding upstream 472206 7065125 ~ 7068197 (+)
LOC122351804 lratb,LOC107665934,LOC107590749,LOC107758869,LOC107714130 non-coding upstream 623706 6912279 ~ 6916697 (+)
G1706 NA non-coding downstream 50587 7598267 ~ 7606500 (+)
G1697 NA non-coding downstream 77268 7624948 ~ 7628311 (+)
G1698 NA non-coding downstream 100209 7647889 ~ 7648624 (+)
G1732 NA non-coding downstream 159205 7706885 ~ 7708131 (+)
G1751 NA non-coding downstream 258025 7805705 ~ 7806252 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other upstream 388183 7146873 ~ 7152220 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other upstream 680133 6846500 ~ 6860270 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other upstream 694855 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other upstream 758262 6771486 ~ 6782141 (+)
G1414 NA other upstream 1003446 6533502 ~ 6536957 (+)
spink4 LOC107758865,LOC107692710,LOC107723196,LOC107565379 other downstream 172585 7720265 ~ 7721425 (+)
pcdh10a pcdh10a,LOC107751533,LOC107557555,LOC107746446 other downstream 407031 7954711 ~ 7985615 (+)
cxcl8a LOC107714205,LOC107702289,LOC107562973,LOC107692705,LOC107565350 other downstream 1059145 8606825 ~ 8607785 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other downstream 1075478 8623158 ~ 8634399 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other downstream 1152760 8700440 ~ 8705873 (+)

Expression


Co-expression Network