mnd1 (mnd1,LOC107700309)


Basic Information

Item Value
gene id mnd1
gene name mnd1,LOC107700309
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14413027 ~ 14424145 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246881.1
CACGCATGCGCAGTGAGAGTTCCTCCCCATCTCGCGCCAATATCGAGTTTAACTGGAGTTGTCAGACATGTCTAAAAAGAAAGGCCTTAGCTTGGAAGAGAAAAGAAGTCGTATgatggaaatattttttgaaactAAAGATGTGTTCCAGCTGAAAGACATAGAAAAAATTGCCCCCAAATCCAAAGGAATCACTCCTATGTCAGTGAAAGAGGTGTTGCAGAGTCTGGTGGATGATAACATGGTGGACACTGAGAGGGTGGGCACCTCCAACTATTACTGGGCGTTTCCTAGTAAAGCCCTGCACGCCCGTAAACGCAGATTAGAGGAACTGGAAAGACAAAATGAAGACGGGAATCAGCGCAAAAAAGCCCTTCAGCAAGCCGTTGACAGAGCCAAAGTGGGACGTGAAGTTAACgaggagagagagaaccTCCTGAAGGAGCTCGCAGCGTTGAAACATCAGAGAGATCAGCTAAAGGCTGAGCTGGAGAAGTACAAAGAATGTGATCCAGAGGTGGTGGAAGAGATACGTAAGGCCAACATTACAGCAAAAGAGGCCGTGTCCAGGTGGACAGATAATGTTTTTGCAATCAAATCCTGGGCAAAGAAGAAGTTCGGCTTTGAGAACAGCAGCTTGGACAAAGCTTTCGGAATACCAGAGGACTTTGACTACATTAACTGACCGAAACGGATCTTATGATTGTTTTCAAATCTGCACAGTCAGTAAGGTTTATTGTATTAGCTCAGTTAGATTTCTGTTTGTTATCAGTTCTGTATGTTTGAGAAACAGCTGTGACTGACTTACATCGTGAAAAGTGCGGAGTACATTGTCAGCGGCGCCCCACCCTAGAAATTTAACCTTGTCTGCTACAAGCAAAACTTTCAGATTGATTTGTCCGGGTAAAAAGGGTAAATCTGCTCCCGGTGTGTAAGCGGAGAAGGTGTTGTGTTAACCCTTGGCCGCCCAGAGATGCACCCTATAACCACACTGACTGCTTGGACACCTGTTGATAGAGAAACCAAACCTTGCAGATACTGCTGGGATGATAAATGGAGCTGCACATCAAAGGTCAATTCAAGGAAATGAATCACAGGTTAGAGTTAAAGAAGGTAACAATTGTTTGTagacaaaaaaagtatgttgCAAGGATACATTTGGTTCTTTATGAAGTAGGATGTGTTATGATGTAATGTTATATGTTCAGGTcaggtttcttttttctgtttatatatatatattgttttgtgcaCATGTAtcttgtaaatatgaaaaaatggcTTTTTCAATGACTTTGTGTGATAtggtttaataaatgtacagttaTCAAGCA

Function

symbol description
mnd1 Predicted to enable double-stranded DNA binding activity. Predicted to be involved in reciprocal meiotic recombination. Predicted to act upstream of or within DNA recombination and meiotic cell cycle. Predicted to be active in nucleus. Orthologous to human MND1 (meiotic nuclear divisions 1).

NR:

description
PREDICTED: meiotic nuclear division protein 1 homolog

GO:

id name namespace
GO:0006310 DNA recombination biological_process
GO:0005634 nucleus cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246881.1 True 1334 mRNA 0.42 8 14413027 14424145

Neighbor

gene id symbol gene type direction distance location
LOC122350619 dctpp1,LOC107695562 coding upstream 569636 13842778 ~ 13843391 (+)
fhip1aa fam160a1,fam160a1a,LOC107745858,LOC107695572,LOC107700307,LOC107757618,LOC107598295 coding upstream 585645 13809693 ~ 13827382 (+)
rps3a rps3a,LOC107695588 coding upstream 626414 13783815 ~ 13786613 (+)
mab21l2 mab21l2,LOC107700304 coding upstream 753917 13656854 ~ 13659110 (+)
ncapg ncapg,LOC107700299,LOC107757563 coding upstream 978807 13423032 ~ 13434220 (+)
tmem131l LOC107695518,LOC107745862,LOC107757619,LOC107700308 coding downstream 1109 14425254 ~ 14459018 (+)
LOC122346953 pcdh8 coding downstream 66639 14490784 ~ 14498314 (+)
plrg1 plrg1,LOC107757621,LOC107695461,LOC107700313 coding downstream 159505 14583650 ~ 14588764 (+)
si:dkey-30k22.5 LOC107695853,LOC107572196 coding downstream 181307 14605452 ~ 14607397 (+)
gucy1a1 gucy1a3,LOC107695445,LOC107572203,LOC107700279,LOC107598251 coding downstream 211075 14635220 ~ 14643239 (+)
G3262 NA non-coding upstream 7024 14402406 ~ 14406003 (+)
G3245 fbxw7,LOC107757568,LOC107745860 non-coding upstream 139242 14268912 ~ 14273785 (+)
G3165 gatb,LOC107695556 non-coding upstream 530632 13828059 ~ 13882395 (+)
LOC122345860 sh3d19,LOC107745872,LOC107695906,LOC107598296,LOC107700261 non-coding upstream 620187 13787434 ~ 13792840 (+)
G3125 NA non-coding upstream 814913 13597901 ~ 13598114 (+)
G3282 NA non-coding downstream 57285 14481430 ~ 14481806 (+)
G3322 arfip1,LOC107695488,LOC107745866,LOC107700312 non-coding downstream 102472 14526617 ~ 14528471 (+)
G3324 NA non-coding downstream 106871 14531016 ~ 14532206 (+)
G3326 fgg,LOC107745866,LOC107695488,LOC107714655,LOC107695473,LOC107700315,LOC107757622,LOC107572199 non-coding downstream 108870 14533015 ~ 14596547 (+)
G3361 NA non-coding downstream 190788 14614933 ~ 14615917 (+)
G3187 gatb,LOC107695556,LOC107695902 other upstream 294594 14114431 ~ 14118433 (+)
slit2 slit2,LOC107700301,LOC107695646 other upstream 827046 13516208 ~ 13585981 (+)
rhoh rhoh,LOC107548321,LOC107598269,LOC107757583 other upstream 1207311 13203059 ~ 13205716 (+)
dnah6 dnah6,LOC106610484 other upstream 1688569 12659262 ~ 12724458 (+)
kdm4c kdm4c,LOC107702398,LOC107548355,LOC107570226,LOC107655842,LOC107750465,LOC107709452 other upstream 1754520 12644679 ~ 12658507 (+)
LOC122345399 NA other downstream 56053 14480198 ~ 14481346 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other downstream 178167 14602312 ~ 14603888 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other downstream 186099 14610244 ~ 14612677 (+)
G3380 LOC107572695,LOC107695836 other downstream 299400 14723545 ~ 14791788 (+)
hemgn hemgn,trmo other downstream 606799 15030944 ~ 15034800 (+)

Expression


Co-expression Network