LOC122351065


Basic Information

Item Value
gene id LOC122351065
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 8887854 ~ 8889811 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247924.1
ATCACTCTCTGAGATGGAGAAGACAAGACTTGCTCTCATCGCACTCATTTttttattgtttcatcACAAAAGGAGTTTTGGAGAAGAAGTGGAGATGAAAGTCAGACCAGGAGAAAACATCACTCTCTTCTGTGATCGCTCTCTAAGTCTTGGTTCGGTCATTGTATGGATAAGAAACTGCTCTCACGAAAATCAGCCCTCTCTTATAATGGATTTTAGGATAATTGACCTGGAGAAATTTCAGCGATTGAACTTTATCCACAACCCCTATGATAATTCTCATGGTCTACATATTACTAACATCAGCGTCTCTGATCTGGGACTGTACTACTGTGCGGAAGTAGAGAAAAAAGTTAATCGAGACCAAAAAGGCATCATCTCCTCATCTAAAGCGTACTATTATGGAAACCGAACAACTCGTCTTTCTCTAGAAGGACCCCTGAACAGCACCTCCACAGCACCTCCTGTATCAGACTGTGTGCTCTGCCGGACGCTGCTGTTCAGTGTGTGTCCGGTGTGTGTTCTCCTCTCCTTCATCTGTGTGTTATGCCTCTGTTGTAAGAATACTACAGGTTCTGCAGCTGATCAAAAAGACAATCataaaaatagaacattttttcAGGAGAATGATGTTAGCGAGGTGTGTTATGCATCTGTAGACGTGGTGACCTGGAGACAAAACCGGAAGAGAGAAACGCAAGAGCCAAGTTCAGATTTCACTACTTACGCTCATGTCAGAACAGAAACCGAATAGATTTGAAAGATGCGGGAGCCATTATCATTGAAACATCCTGTTGTTggcatgtttgtttgttcagatgtgtgtttgattaaaacacCGATGCAGGAAATGTGAAgcaagaattattattattattattattatcatttttataagcAGTACagaattaacaaataaaatatttacctaTA

Function

GO:

id name namespace
GO:0004175 endopeptidase activity molecular_function
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247924.1 True 933 mRNA 0.40 5 8887854 8889811

Neighbor

gene id symbol gene type direction distance location
LOC122330624 NA coding downstream 2286 8884094 ~ 8885568 (-)
LOC122330473 NA coding downstream 9973 8875917 ~ 8877881 (-)
LOC122351709 NA coding downstream 20042 8866455 ~ 8867812 (-)
LOC122345778 dmd,LOC107692624 coding downstream 136282 8713630 ~ 8751572 (-)
LOC122351261 NA coding downstream 211239 8673994 ~ 8676615 (-)
LOC122345830 stim2a,LOC107656659,LOC107742493,LOC107563819,LOC107714208,LOC107562986,LOC107702263 coding upstream 24413 8914224 ~ 8922591 (-)
LOC122353120 rbpja,LOC107563830,LOC107742494,LOC107702317,LOC107562987 coding upstream 37210 8927021 ~ 8932564 (-)
LOC122353124 slc34a2a,LOC107657019,LOC107742514,LOC107565308,LOC107714203,LOC107562975 coding upstream 46934 8936745 ~ 8942865 (-)
dlc1 dlc1,LOC107742489,LOC107656601,LOC107702327,LOC107562932,LOC107750042,LOC107565476 coding upstream 377724 9267535 ~ 9357022 (-)
LOC122347442 sgcz,LOC107656592,LOC107702328 coding upstream 517349 9407160 ~ 9630558 (-)
G2033 NA non-coding downstream 190453 8695872 ~ 8697401 (-)
G2016 NA non-coding downstream 217050 8669413 ~ 8670804 (-)
G2010 NA non-coding downstream 253457 8631464 ~ 8634397 (-)
LOC122351284 NA non-coding downstream 439230 8446548 ~ 8448624 (-)
G1868 NA non-coding downstream 720467 8138483 ~ 8167387 (-)
LOC122351897 NA non-coding upstream 3809 8893620 ~ 8894562 (-)
G2138 NA non-coding upstream 790085 9679896 ~ 9693438 (-)
G2174 LOC107747394,LOC107562929,LOC107721426 non-coding upstream 897503 9787314 ~ 9792467 (-)
G2286 NA non-coding upstream 1366839 10256650 ~ 10256887 (-)
G2292 fat1,fat1a,LOC107562748 non-coding upstream 1417159 10306970 ~ 10307238 (-)
LOC122351550 LOC107656542,LOC107747394,LOC107562929,LOC107721426,LOC107707229,LOC107658053,LOC107751937,LOC107661411 other downstream 89499 8779212 ~ 8798355 (-)
G1926 NA other downstream 280059 8556040 ~ 8607795 (-)
mgarpb LOC107692675,LOC107742504,LOC107714221,LOC107563974,LOC107562972 other downstream 387642 8492144 ~ 8500212 (-)
dmd dmd,LOC107692624,LOC107723158,LOC107665951,LOC107758879,LOC107565081 other downstream 1592025 7204004 ~ 7295829 (-)
G1642 NA other downstream 1717832 7125642 ~ 7170022 (-)
G2302 slc25a4,LOC107656452,LOC107562743 other upstream 1467370 10357181 ~ 10401686 (-)
LOC122347930 dnah6,LOC106610484 other upstream 1845159 10734970 ~ 10799609 (-)
LOC122347618 kdm4c,LOC107655842,LOC107709452,LOC107702398,LOC107548355,LOC107750465,LOC107570226 other upstream 1916758 10806569 ~ 10814075 (-)
G2382 cpe,LOC107591555,LOC107745061,LOC107548348 other upstream 2064064 10953875 ~ 10981366 (-)
G2401 NA other upstream 2163343 11053154 ~ 11053941 (-)

Expression


Co-expression Network