LOC122351150 (LOC107692714,LOC107577730)


Basic Information

Item Value
gene id LOC122351150
gene name LOC107692714,LOC107577730
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7560832 ~ 7562287 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248034.1
GTTGGAACACGTGGAGCATTCTGAAATGTAGAGCACTAGAAGACGCGATTTAGgaATTCTCAACTTGGCTCATTGCAGAGATGATGATGTTACATATTCCAGTTGGGTAGTTTCCATCGTTTTCCACATCATTCAGTAGTTTCCAGTGAAGATGCTAAAGCAGCTGCAGTTTTTCCTTCTGCTGGGAACACTATTTATCATATTCTTCATAATAGTTCACTGGGATGACGTGAGAGATGGGAATATTCATGTGCACGTGGCTTCATCATCTCCCGCGTTACCCACAATCATGATGTCCTCTAGACACGGGAAAAGTGAGGAGTTAAGCAGGTCAGTCGACCCGAACATGACGTTCATCACAACTCACCTAAAGCATGACCAAGGTGCAAACAACCTAAACCAAACTTTTACTCCGTTTTCTCCAACGCACCTCGAACTACGTCAAGCGCACCGTAGACATTCGATAACAGAACTTTGCTCAGCCAATAACAGCTTCAACTTCCCCGGAAAATTTAAGACATTTGACCAGATTCCAAGCAAAGCCCTGGACCACCTCATTGTGGATGATCATCACGGTGTTATTTACTGTTTTGTACCGAAGGTAGCCTGCACCAACTGGAAACGAGTCATGATTGTTCTCAGCCAGAGCCTGAAGACACCTGATGGAGCTCCGTATCTGGATCCTCTTGACATACCATCAGCGTTATCCCACAATGCTACTCTGCATCTGACATTTAACAAGTTTTGGAGGCTTTTTGGTCGTTTCTCACGTCCTTTGATGCATCACAAACTGAAGAATTACACAAAGTTCCTTTTCGTACGGGATCCTTTTGTACGACTTATTTCTGCTTTCCGGAACAAGTTTGCTCTGCCTAATGAGGATTTTTACAGACAGTTTGGCTCTGTAATGCTTCAACGTTATGCTAATATCTCAAAGCTCCCCGACTCCGCTCAAGAAGCCTTCACTGCAGGTATCAgattgtcatttactcactttatTAAGTACCTGTTAGATCCACAGACTGAGAAGGAGAAGCCATTTAATGAGCACTGGCAGCAGATGTACAGACTCTGCCATCCGTGCCAAATTGAGTATGACTTTGTTGGGAAATTGGAAACTCTTGATGAGGATACTGAACATTTGTTGAAGATTCTTGGGATGGAAAACCATGTTCGCTTTCCCCCGGGGTATCGCAACAGGACAGCTGCGAACTGGGAGCGAGAGTGGTTTGGAAACATTTCAGTATCCGACAGGAGAAAATTGTACAATCTTTATGAAGCAGATTTTAGGTTATTTGGATACAACAAACCGACACTTTTGCTTGAATGACAGAGACAGTTGTAGAGATTACATGCATATAACGTGAAATAAA

Function

NR:

description
PREDICTED: carbohydrate sulfotransferase 12-like

GO:

id name namespace
GO:0016051 carbohydrate biosynthetic process biological_process
GO:0016021 integral component of membrane cellular_component
GO:0008146 sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248034.1 True 1373 mRNA 0.43 2 7560832 7562287

Neighbor

gene id symbol gene type direction distance location
si:dkey-26i13.8 si:dkey-26i13.8,LOC107723167,LOC107564186,LOC107665939,LOC107557933,LOC107758843 coding upstream 1420 7548351 ~ 7559412 (+)
LOC122350276 eif3b,LOC107692621,LOC107758884,LOC105890332 coding upstream 13152 7540403 ~ 7547680 (+)
knstrn knstrn,LOC107723170,LOC107564216,LOC107758858,LOC107586895 coding upstream 246395 7311397 ~ 7314437 (+)
LOC122330119 LOC107723198,LOC107692626,LOC107564241,LOC100334711 coding upstream 375550 7181245 ~ 7185282 (+)
atp1b1b LOC107723190,LOC107692627,LOC107564268,LOC107665977,LOC107758877,LOC107586865 coding upstream 391485 7162308 ~ 7169347 (+)
snx8b snx8b,LOC107692712,LOC107758890,LOC107565397,LOC107665942,LOC107723171 coding downstream 53708 7615995 ~ 7623816 (+)
tspan5b tspan5b,tsn5,LOC107692617,LOC107557938,LOC107758863,LOC108441323,LOC105893813,LOC103360687,LOC104950293 coding downstream 89435 7651722 ~ 7660532 (+)
slc24a2 slc24a2,LOC107692616,LOC107758891,LOC107665969,LOC107564132,LOC107557960,LOC108441320 coding downstream 101048 7663335 ~ 7680372 (+)
saraf LOC107758892,LOC107557959,LOC107665975,LOC107692614 coding downstream 118583 7680870 ~ 7684601 (+)
xpa xpa,LOC107758894,LOC107565010,LOC107692611,LOC107557957,LOC107723178 coding downstream 125088 7687375 ~ 7690927 (+)
LOC122330513 NA non-coding upstream 152627 7401131 ~ 7408205 (+)
LOC122336506 NA non-coding upstream 239063 7318202 ~ 7321769 (+)
G1577 LOC107723159,LOC107723172,LOC107565422,LOC107758837,LOC107590752,LOC107758876 non-coding upstream 417091 7135796 ~ 7143741 (+)
G1565 LOC107590778 non-coding upstream 492635 7065125 ~ 7068197 (+)
LOC122351804 lratb,LOC107665934,LOC107590749,LOC107758869,LOC107714130 non-coding upstream 644135 6912279 ~ 6916697 (+)
G1706 NA non-coding downstream 35980 7598267 ~ 7606500 (+)
G1697 NA non-coding downstream 62661 7624948 ~ 7628311 (+)
G1698 NA non-coding downstream 85602 7647889 ~ 7648624 (+)
G1732 NA non-coding downstream 144598 7706885 ~ 7708131 (+)
G1751 NA non-coding downstream 243418 7805705 ~ 7806252 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other upstream 408612 7146873 ~ 7152220 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other upstream 700562 6846500 ~ 6860270 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other upstream 715284 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other upstream 778691 6771486 ~ 6782141 (+)
G1414 NA other upstream 1023875 6533502 ~ 6536957 (+)
spink4 LOC107758865,LOC107692710,LOC107723196,LOC107565379 other downstream 157978 7720265 ~ 7721425 (+)
pcdh10a pcdh10a,LOC107751533,LOC107557555,LOC107746446 other downstream 392424 7954711 ~ 7985615 (+)
cxcl8a LOC107714205,LOC107702289,LOC107562973,LOC107692705,LOC107565350 other downstream 1044538 8606825 ~ 8607785 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other downstream 1060871 8623158 ~ 8634399 (+)
stim2a stim2a,LOC107742493,LOC107563819,LOC107656659,LOC107702263,LOC107714208,LOC107562986,LOC108441330 other downstream 1138153 8700440 ~ 8705873 (+)

Expression


Co-expression Network