g3bp2a (g3bp2,LOC107695289,LOC107714642,LOC107700328,LOC107757577,LOC107598276)


Basic Information

Item Value
gene id g3bp2a
gene name g3bp2,LOC107695289,LOC107714642,LOC107700328,LOC107757577,LOC107598276
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14980372 ~ 14988078 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248942.1
GTTCCAGTGTGACGGGGGTTCTTGTCCCAGATCGCAGGGGTTAGACAATAAGGATCCAAACAGCAGCATTTCCATTAATAACACAGCATAGATGGAATTTATCTCTCTGTGGTTTTGAGCAGCTGTCGCTGACACACATACAACAGTTATAATTGTATAAGACGACTTGAATAATTcgtcttcttttttatttaaccacttaaataaatcaaatagatCCCAGGAAAAGATTCTGACGCTTTAGCAAGGAAATGGTGATGGAGAAGCCCAGTCCCCTGCTGGTAGGGCGGGAGTTTGTGAGACAGTATTACACACTTCTCAATAAGGCACCAGACTTTCTGCACAGATTCTATGGACGAAACTCCTCCTATGTCCATGGTGGACTGGATTCGAACGGGAAGCTGTCAGAGGCAGTCTACGGGCAAGCTGAGATACATAAGAAGGTAATGTCTCTGCAGTTCAGTGAGTGCCACACAAAAATCCGACACGTGGATGCCCATGCCACTCTGAGTGATGGTGTGGTTGTCCAGGTGATGGGAGAGCTTTCCAACAATGGGCAACCCATGAGGAAGTTCCTACAGACATTTGTACTGGCTCCAGAgGGTTCCGTGGCCAATAAGTTTTATGTTCACAACGACATCTTCCGATACGAGGATGAGGTGTTCGGTGACTCTGAGGCGGAGCTTGATGAAGAGTCCGAAGAAGAAGCTGATGAGCCAGAAGACAGGCAACCATCACCCGAACCCCTCCAGGACAGCCCCAGTAAAGCAAACTGCTATGAGCCCCATCCCGTGAGCTGTAACAATGGCGTGGAAGAAGCTCACGAGGAAGCGGTTATGGAGCTAGAACCTGAGGTTGCTCCAGAACCCAAGACTGAGGAGTCGAAGCTCAAGGCAGAGGAGAAGGTCATAGAAGAGTTTGAGGAGAAGGCACCGTCTCCTGTTCCTATGGAATCACCACCTAACATACAGGAACCACCCAAAACTTCATCTTGGGCTTCTGTGACCAGCAAAAATTTGCCTCTTGCTGGGACTGTTCCATCCTCTGGAGCTCAGCCACATGTTGTTAAAGCACTAAACTCACAGGCCAGGGTTGAGACCAAGCCGGAGGTATCATCAGCTACCATCCGTCCACGTGACCAGCGTATCCGTGACAGACCTTCAGTAACCTCGAGAGGGCCTAGACCTGATGGCGTCTCGTCCTCTGACCCTCAAACTGGGAAGCCACACTTCAGCTTTGTGAATAAAGGAAGGGGAGATGAGTCGAGTGAAATGGACAGCAGAAGGGTTGTCAGGTATCCAGACAGTCATCAGCTGTTTGTTGGAAATCTCCCTCACGACATCGATGAGAGTGAACTCAAGGACTTCTTTATGACATTCGGAAATGTTGTTGAGCTGCGTATCAACACCAAAGGCACCGGAGGAAAGATTCCCAACTTTGGCTTTGTTGTCTTTGATGACTCCGAGCCAGTGCAGAGAATTTTAGGAGTTAAACCTATCATGTTCCGTGGTGAGGTGCGTCTGAATGTGGAGGAGAAAAAGACGAGGGCGATGCGTGAGCGGGAAACTCGCAGTGGAGGCGGAGAAGACCGGCGGGACACGAGGCGTAATGAGCGCGGTCCGGGCGGCCCGCGGGCCATCGCCGGGAGCAGCATGATGCGAGACCGTGACGGCAGAGGCCCACCTTCACGCGTTTCCACCGTACCTAAAGCAGGCATGGCCTCTGGGAGGGGCGCAGGTTCTAGCGAGGGCCGTTTTGCTGCTCAGAGGCGTTGAGAGGAGCTCCCCTTATAGTTTGGTagtaaaatgttcatttatgacGATATTGAGAAGTCtatgtaaaaacatatacatcagggttttcgttttttttctttcagttttacttCTTGTGTACACTTGCATTTTTGCCTTTTGGAATGTCAGCTGTTTCTTGTGAAACAGATCAACAACTTGAACAATGTAATGACTCAAAACACACTGTTCACTTTAAATTGGAGTTGTGCTGCAAGTCCTCTGGTTTTTCATTCATCAAGTGGTGACCATTACAGATGTTATAGGGAAACAAATCAGTTAGGTATATTTAGTGCTGATTGAAGTCTAAGTTCTGCTCTGTAATATTTCCTTTGACATTTCCTATTAGATTACCTTCCAATTGCTGTCGGTGTAAAATGTGCAGATTGAAAGGTggctttgaaaaatatttttttggttgttagttttttttttcaggctagCCTTTTAATACATGCTATTTAGGTAATTTCACTAATCGGCTCATTAATAAGCTAAAGGCTACCTGTAGACATAACTGTGAGCTAACAATTTCATTTAATGGTAATGACTTCATGCTAATAGAAAGTTAAAGTACAAGACAGTGAGAGTTTAGACAAGACATGTCTTCTCCAGTTCTGTTTATGtacggttttgttttttgttttttttataattattttaatgtacagaTTTGACAGTACTTTTTTATGTTCTGGGCCTGCCTGAATAAGTGAATGGAGCATTATTGAAAGCATTTGTAAAGTGGAAAGGTACCATGAATTTTGTAAAGACGTTTTGGATTtatgctgaatgtgttttttttgtaaggcAGAGTcactttattgcattttttttttctttttagtttttataatcCTAATCTCATTTTGTGATGTGAGTTTCCTTTTAACATACAGACACttgttcttgtttattttaaattaaagcataaCAGTATTTATACAGGGTACAGAgaaacttttgcatttttttgcatcaaaCGTGCATTTCCGACTTTCCCAAATGGACTAGTTTTGCgttctacatttaaaaaagaaaaaaaaatgcaattgtgGTACTTTAAATAGCactgattataaaaaaaagtttatttttttttccccctagaCACATGaggcttaattttttttacctgcaGGAACTGTtggttttttcagaatttttaccTTATTGGGAGAAGCATTATTTActgttcattattattgttttttttgttttttttttccatgtgtaCCTGTTTAATTGATATCCACACCCGTTTTCCATTTTCATAATGAGGAACGCGTTAATGCTGTTCTTCATGAGAGAGAGGAAGCGTAAGTCCAGTGGGGTAGACACTGTTTTCATTGTGCAGTGGTACTCTGTCTACaatttgcactgattttgtaAGCACAGTTTGATGTAGCGctatttttgatgtttaatgTCTTCCGTGTCAGGTAGATTGCACTTACTGCAGTATTTCTAGGACAATCTTCATCAGGGACATTGAATTACTTTTGTTATCCGTTCATTTCTTGGGGTGGCTTGTTCTCTTTGGTTGCAGATACGTTTGCTTTTGGAAGATTTTGGAAGAAGATAAGCCTACAGTCCTGCCTAGAGACTTCTTTCCCCATCAGCTCTACCTAGTTCTTACGTGTTCTGAGTTTGGGACctggaacattttaattactgtgTAAATAAATGCCACAATGGCCTTTCTTTTTAGATGTAAAGTACTTCATTCAGCCGAAAACTTTGAACGTTTGGATTAcaacagaggaaaaaaagaagacaaaacacCTAGGGCTTGGTCAAATAACTGTGCTTTTCAACCCAAAATATGCGTCAgactttaatttgtttattcgCTCATATCATTTAATCAGATTCTTTTAACCCTCTAATCCTAATGCAAAACattgcttttcatgcagttactaCGAGGTTTATAAATGCTCTGTTTATAGATGTAGTTCATTTTGGTGGAACAAGAACGTGTTCTTGTATTAGCAGGTGGTTTCCATGTTATTTTGCTTAGACTGCATTTGGTGTGAGTAGAACATGTTGCAGCtgggtgtttatttattattgtttttatttttcattttcaatcgGTTTCAGTGTGTTAGACTTGACATACAATAAACTGAAATCTGTGCTGTTCA

Function

symbol description
g3bp2 Enables RNA binding activity. Involved in positive regulation of stress granule assembly and protein homooligomerization. Located in cytoplasmic stress granule and cytosol.

NR:

description
PREDICTED: ras GTPase-activating protein-binding protein 2 isoform X1

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005622 intracellular anatomical structure cellular_component
GO:0003676 nucleic acid binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K24983 G3BP2; Ras GTPase-activating protein-binding protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248942.1 True 3943 mRNA 0.41 13 14980372 14988078

Neighbor

gene id symbol gene type direction distance location
arhgef38 arhgef38,LOC107695304,LOC107714644,LOC107700325,LOC107757628 coding upstream 4117 14966434 ~ 14976255 (+)
tet2 LOC107714646,LOC107695330,LOC107595052,LOC107598249,LOC107700324,LOC107757629 coding upstream 21264 14938737 ~ 14959108 (+)
LOC122348129 mtap,LOC107595051,LOC107714626,LOC107700323,LOC107598256,LOC107757575,LOC102313215 coding upstream 118456 14854210 ~ 14861916 (+)
toporsa topors,LOC107695355,LOC107700322 coding upstream 126462 14850160 ~ 14853910 (+)
ndufb6 ndufb6 coding upstream 130701 14848013 ~ 14849671 (+)
uso1 uso1,LOC107714641 coding downstream 319 14988397 ~ 15004240 (+)
coro2aa coro2a coding downstream 17529 15005607 ~ 15024881 (+)
spag5 LOC107714621,LOC107695699,LOC107595089 coding downstream 50326 15038404 ~ 15049923 (+)
psip1a psip1,LOC107658176,LOC107572235,LOC107742007,LOC108439950 coding downstream 669219 15657297 ~ 15690847 (+)
raph1b raph1b,LOC107707841,LOC107588825,LOC107719733,LOC107556694,LOC107654246 coding downstream 1035861 16023939 ~ 16064272 (+)
G3381 LOC107714625,LOC107695349,LOC107595098 non-coding upstream 110480 14862612 ~ 14869892 (+)
G3394 NA non-coding upstream 168229 14749316 ~ 14812143 (+)
G3391 gpank1,LOC107700266 non-coding upstream 170651 14745709 ~ 14809721 (+)
G3384 NA non-coding upstream 197533 14716000 ~ 14782839 (+)
G3374 NA non-coding upstream 205695 14681459 ~ 14774677 (+)
G3432 NA non-coding downstream 37632 15025710 ~ 15029067 (+)
G3443 NA non-coding downstream 49201 15037279 ~ 15037670 (+)
G3431 NA non-coding downstream 75173 15063251 ~ 15114948 (+)
LOC122350773 NA non-coding downstream 457110 15445188 ~ 15446124 (+)
G3593 NA non-coding downstream 482544 15470622 ~ 15475480 (+)
G3380 LOC107572695,LOC107695836 other upstream 188584 14723545 ~ 14791788 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other upstream 367695 14610244 ~ 14612677 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other upstream 376484 14602312 ~ 14603888 (+)
LOC122345399 NA other upstream 499026 14480198 ~ 14481346 (+)
G3187 gatb,LOC107695556,LOC107695902 other upstream 861939 14114431 ~ 14118433 (+)
hemgn hemgn,trmo other downstream 42866 15030944 ~ 15034800 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other downstream 190525 15178603 ~ 15317624 (+)
G3599 NA other downstream 490020 15478098 ~ 15498680 (+)
G3647 NA other downstream 665015 15653093 ~ 15653381 (+)
LOC122348759 raph1b,LOC107654246,LOC107707841,LOC107719733,LOC107705038 other downstream 1076193 16064271 ~ 16069915 (+)

Expression


Co-expression Network