pip4p1b (tmem55bb,LOC107723169,LOC107665981,LOC107590777,LOC107565103,LOC107721780)


Basic Information

Item Value
gene id pip4p1b
gene name tmem55bb,LOC107723169,LOC107665981,LOC107590777,LOC107565103,LOC107721780
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 7003467 ~ 7007854 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249400.1
gcgaaaaaaaaaatcatgtgatcATGTGACGCTTCCTGGAGCTTTACTTTAACGCATCACTTTTGCTCTCCGCAACAACATTCATCAGCAGCGAACCCTAATTCCCCCGCGGGATTTTGCGCTCGTTTACGGCATGGCTGACGGTGAGCGATCGCCTTTGCTGTTGGACAGTCGCGATGGAATGAACGGTCTGTCACCGGGAGATGAGACCTACCGACCCTTGACCAAACCACAGAATTTCCCAGCATTCCCGTCAGCTCCTCCCGTGTCGATGCTGGGAGAGGCTCCTCCGCCGTACTCCCCGCTGGGCTCTCCAGAGAGCGGCAGTGCTCCTGTCATCAGCTGCAGAGTGTGTCAGTCGCTTATTAGCGTGGAAGGCAAAATCCACCAGCATGTGGTCAAATGTGGAGTTTGCAATGAAGCTACTCCCATAAAGAATGCTCCAGCTGGAAAGAAGTATGTGAGGTGTCCGTGTAATTGTCTTCTCATCTGCAAAGTCACCTCACAGAGGATCGCCTGCCCCCGACCTTACTGTAAGCGAATTATCAATTTAGGTCCAGTTCATCCTGGTGCCAGTAGTCCGAATCCTCAGCCTAGTGGTGCCAGAGTTTCCTGTGGCCACTGTGGAAACACTTTCCTATGGACAGAATTTACAGATCGGACACTGGCTCGCTGTCCACACTGCAGAAAAGtCTCGTCAATTGGCCAGAGGTACCCTAGAAAGCGGAGTTTGATATGTTTCCTGATGTGCTTGATCTTCATCATAACGACTGCGGGATTGATTGCTGGCACGTGGTGGAAGGCAAGGGTATATAAGGGGATTTATGCCTCATGGGTGTTTTTCATTGTCCTGGTGCTGATCACTTTGGTCAGAGCTTTACACTGGGCCTGCCTGAAAATTAGTGAACCGCTGCACAACTACTCATCGTAGGAGTGATGaatgtggaggaggaggaggaggaggtagAAATGAAGTGCAGACAAGAACAagacaaggagaaaactgagcaaaaaatgttaataaaggGATGTTCTgccagaaaaagtcatatttttcaCCCCAAagtcaatgcaaaaaaaattcacttGGAACCTtggaatattttgaaatatcttttttttcatttggggGTAAAATATGACCATTCAGTGCTCTGCTTTTGAACCCTGCTTTTCTCTGAACTGATTTCCAATCCATTTTGCACACGCCGCTGATGGGAATCTGCTTTCTAAACACTGCTAAATTAGAAAAAAGCAtaggaaaacaaatatttcagccTTGTCGGTAGGCTAATAACTTCCAGTTTAGTTGCAGAATCGGTAACTGCTGAAACGGGTCATGCGTTTGGCTCCGACGTCGCTGTGGAGTCACACGAATGTATTGAAAGGTTACAGTTAGAATGAGAGATTGTGGCTGAATTGCTGACACAGTGTAAGTGCCTCGTGTGACAATGTGCTCTGTTGTTATAACTTACAAAGCAGGTTTTTTTCCAAGTATGAAGGAACTGCAACTTTTAGCTTTATTGAAAATCGTAACCTGACCAGGCATATCAGATGAAGGGTTTGAGcaagaaaaaggaaatgaaaacacactttAGAAAAGCAAAACTCTTTTTTAGACCATGCATTTTAGTGCATGTCGACCTATTACTGGAATGTGCTATTGATTGAATCAAAGATGAATTGAATATTCCTTCAGTGTAGTTTCTTGCTTTTCTGTAGATGTTATTCAGTGGACCTATAGgggtttcttttcttctgtggtGCCGGTTCAGACCAAACCTTTAACTTCCTTTTCTTCCTCCTGAAGCATTCAGCATGTCTTACTGCGTATCTGCACCCTCGAATTCAGCTTAGGCACCAAATTATGCTTTGCTTACTAACTAACAATGTTCAAATATCCAACACAATGCAATATTACAGATAATTTTGAGATTTCCAATGGTCCTCGTGTTACTTTTGttgatgctgtttttaaatcagGCATTGCTGCTCATAATTTGTACCCGTCTTTGGTTATGTAGTTAAAGCTGTATTAAAATCTTTTCCATTATATGCTATTAAGACCTTTAACGTTACCTAGTAAAGTAGTACGGaagattattttttaca

Function

NR:

description
PREDICTED: type I phosphatidylinositol 4,5-bisphosphate 4-phosphatase-B

GO:

id name namespace
GO:0005765 lysosomal membrane cellular_component
GO:0031902 late endosome membrane cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K13084 TMEM55; phosphatidylinositol-4,5-bisphosphate 4-phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249400.1 True 2112 mRNA 0.43 7 7003467 7007854

Neighbor

gene id symbol gene type direction distance location
zgc:77880 zgc:77880,LOC107692630,LOC107723165,LOC107758853,LOC107665980,LOC107590776,LOC108439367 coding upstream 471 6998425 ~ 7002996 (+)
eif3f eif3f,LOC107665937,LOC107723164,LOC107758850 coding upstream 5255 6994966 ~ 6998212 (+)
npy2rl npy2rl,LOC107714138,LOC107692719,LOC107590775,LOC107665946,LOC107758849,LOC108439369 coding upstream 27988 6967526 ~ 6975479 (+)
LOC122351785 LOC107714151,LOC107758870,LOC107665938,LOC107590728,LOC107564312,LOC107692632 coding upstream 82255 6919264 ~ 6921212 (+)
LOC122351754 LOC107714136,LOC107564298,LOC107692720,LOC107665943,LOC107590774,LOC107758848 coding upstream 129688 6868765 ~ 6873779 (+)
dachb dachb,LOC107665972 coding downstream 21806 7029660 ~ 7062000 (+)
atp1b1b LOC107723190,LOC107692627,LOC107564268,LOC107665977,LOC107758877,LOC107586865 coding downstream 154454 7162308 ~ 7169347 (+)
LOC122330119 LOC107723198,LOC107692626,LOC107564241,LOC100334711 coding downstream 173391 7181245 ~ 7185282 (+)
knstrn knstrn,LOC107723170,LOC107564216,LOC107758858,LOC107586895 coding downstream 303543 7311397 ~ 7314437 (+)
LOC122350276 eif3b,LOC107692621,LOC107758884,LOC105890332 coding downstream 532549 7540403 ~ 7547680 (+)
LOC122351804 lratb,LOC107665934,LOC107590749,LOC107758869,LOC107714130 non-coding upstream 86770 6912279 ~ 6916697 (+)
LOC122351810 NA non-coding upstream 91202 6911081 ~ 6912265 (+)
LOC122351800 lratb,LOC107714130,LOC107590749,LOC107665934,LOC107758869,LOC108258974 non-coding upstream 92392 6910376 ~ 6911075 (+)
G1405 ugt5b1,LOC107692647,LOC107714140,LOC107564400 non-coding upstream 412212 6583976 ~ 6591255 (+)
G1415 LOC107747400,LOC107719078 non-coding upstream 461936 6539629 ~ 6541531 (+)
G1565 LOC107590778 non-coding downstream 57271 7065125 ~ 7068197 (+)
G1577 LOC107723159,LOC107723172,LOC107565422,LOC107758837,LOC107590752,LOC107758876 non-coding downstream 127942 7135796 ~ 7143741 (+)
LOC122336506 NA non-coding downstream 310348 7318202 ~ 7321769 (+)
LOC122330513 NA non-coding downstream 393277 7401131 ~ 7408205 (+)
G1677 NA non-coding downstream 505701 7513555 ~ 7582090 (+)
LOC122351737 lratb,LOC107758869,LOC107590749,LOC107665934,LOC107714130,LOC108439370,LOC108258974 other upstream 143197 6846500 ~ 6860270 (+)
G1447 fga,LOC107692636,LOC107565125,LOC107714149,LOC107758872,LOC108439170 other upstream 157919 6711635 ~ 6845548 (+)
rgs11 rgs11,LOC107692642,LOC107590769,LOC107722934,LOC107714145 other upstream 221326 6771486 ~ 6782141 (+)
G1414 NA other upstream 466510 6533502 ~ 6536957 (+)
G1318 NA other upstream 716269 6285858 ~ 6287198 (+)
mpc2a LOC107564279,LOC107692629,LOC107665976,LOC108258922 other downstream 139019 7146873 ~ 7152220 (+)
spink4 LOC107758865,LOC107692710,LOC107723196,LOC107565379 other downstream 712411 7720265 ~ 7721425 (+)
pcdh10a pcdh10a,LOC107751533,LOC107557555,LOC107746446 other downstream 946857 7954711 ~ 7985615 (+)
cxcl8a LOC107714205,LOC107702289,LOC107562973,LOC107692705,LOC107565350 other downstream 1598971 8606825 ~ 8607785 (+)
ppp2r2ca ppp2r2ca,LOC107692591,LOC107563918,LOC107742501,LOC108241547,LOC106531115 other downstream 1615304 8623158 ~ 8634399 (+)

Expression


Co-expression Network