fabp2 (fabp2,LOC107714631,LOC107572697,LOC107598258,LOC107700317,LOC107695844,LOC107757591)


Basic Information

Item Value
gene id fabp2
gene name fabp2,LOC107714631,LOC107572697,LOC107598258,LOC107700317,LOC107695844,LOC107757591
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14661658 ~ 14663101 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249491.1
TTTAGATAAGACAGCGTGCTGTCACCGACGCAGGTATAAAAGACGAGGGCAGGGTAAAGTAAGGCCACCGTCAGAATCACAGCAGTCCGTCATCATGACCTTCAACGGGACCTGGAAAGTCGACCGCAATGACAACTACGAGAAGTTCATGGAAGAAATGGGCATCAACATGGTTAAAAGGAAACTAGCTTCTCATGACAACCTGAAGATCACCCTGGAACAGACCGGAGACAAGTTCCACGTGAAGGAAGTCAGCACTTTCCGCACACTGGAAATTAACTTTACTCTGGGTGTCACCTTCGACTATTCCCTGGCAGACGGCACGGAGCTCACAGGATCCTGGGTCATGGAGGGTGACACGCTTAAGGGGACGTTCACACGCAAGGACAACGGAAAGCTGCTAGTCACAACCAGGAAGATCATTGGTGATGAACTTGTACAGAGCTATACCTATGAGGGAGTCGAGGCCAAGAGGATTTTCAAGAGGGGTTAAAATGACATCAGCATTCCCAAACTTTCTAGTGGGACGATGTGAAACTTTTACATGTTGCAAACATAGATGTTCAACCTGATAATATGGGGATTTAACAATTGGCAGCCCTGAAGTTTACAAAGCATGTATGTAAATCATGTGTCATTTGCACTGTGAGTTTTGATATTTGTGgcaataaagccatttttacatCCTTTA

Function

symbol description
fabp2 Predicted to enable fatty acid binding activity. Acts upstream of or within response to lipid. Predicted to be located in cytoplasm. Is expressed in brain; digestive system; and kidney. Human ortholog(s) of this gene implicated in alcoholic liver cirrhosis; carotid stenosis; coronary artery disease; end stage renal disease; and obesity. Orthologous to human FABP2 (fatty acid binding protein 2).

NR:

description
fatty acid-binding protein, intestinal

GO:

id name namespace
GO:0006810 transport biological_process
GO:0005215 transporter activity molecular_function
GO:0008289 lipid binding molecular_function

KEGG:

id description
K08751 FABP2; fatty acid-binding protein 2, intestinal

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249491.1 True 691 mRNA 0.46 4 14661658 14663101

Neighbor

gene id symbol gene type direction distance location
gucy1b1 gucy1b3,LOC107714654,LOC107757623 coding upstream 2121 14644013 ~ 14659537 (+)
gucy1a1 gucy1a3,LOC107695445,LOC107572203,LOC107700279,LOC107598251 coding upstream 18419 14635220 ~ 14643239 (+)
si:dkey-30k22.5 LOC107695853,LOC107572196 coding upstream 54261 14605452 ~ 14607397 (+)
plrg1 plrg1,LOC107757621,LOC107695461,LOC107700313 coding upstream 72894 14583650 ~ 14588764 (+)
LOC122346953 pcdh8 coding upstream 163344 14490784 ~ 14498314 (+)
mxd4 mxd4,LOC107695376,LOC107714650,LOC107757594,LOC107700283 coding downstream 169602 14832703 ~ 14843409 (+)
ndufb6 ndufb6 coding downstream 184912 14848013 ~ 14849671 (+)
toporsa topors,LOC107695355,LOC107700322 coding downstream 187059 14850160 ~ 14853910 (+)
LOC122348129 mtap,LOC107595051,LOC107714626,LOC107700323,LOC107598256,LOC107757575,LOC102313215 coding downstream 191109 14854210 ~ 14861916 (+)
tet2 LOC107714646,LOC107695330,LOC107595052,LOC107598249,LOC107700324,LOC107757629 coding downstream 275636 14938737 ~ 14959108 (+)
LOC122353352 NA non-coding upstream 37565 14620659 ~ 14624093 (+)
G3361 NA non-coding upstream 45741 14614933 ~ 14615917 (+)
G3326 fgg,LOC107745866,LOC107695488,LOC107714655,LOC107695473,LOC107700315,LOC107757622,LOC107572199 non-coding upstream 65111 14533015 ~ 14596547 (+)
G3324 NA non-coding upstream 129452 14531016 ~ 14532206 (+)
G3322 arfip1,LOC107695488,LOC107745866,LOC107700312 non-coding upstream 133187 14526617 ~ 14528471 (+)
G3370 NA non-coding downstream 9213 14672314 ~ 14678944 (+)
G3374 NA non-coding downstream 18358 14681459 ~ 14774677 (+)
G3384 NA non-coding downstream 52899 14716000 ~ 14782839 (+)
G3391 gpank1,LOC107700266 non-coding downstream 82608 14745709 ~ 14809721 (+)
G3394 NA non-coding downstream 86215 14749316 ~ 14812143 (+)
npy2r npy2r,LOC107572195,LOC107714623,LOC107695741,LOC107757570,LOC107700264 other upstream 48981 14610244 ~ 14612677 (+)
lrata lrat,lrata,LOC107572197,LOC107714634,LOC107695864,LOC107700276,LOC107757590 other upstream 57770 14602312 ~ 14603888 (+)
LOC122345399 NA other upstream 180312 14480198 ~ 14481346 (+)
G3187 gatb,LOC107695556,LOC107695902 other upstream 543225 14114431 ~ 14118433 (+)
slit2 slit2,LOC107700301,LOC107695646 other upstream 1075677 13516208 ~ 13585981 (+)
G3380 LOC107572695,LOC107695836 other downstream 60444 14723545 ~ 14791788 (+)
hemgn hemgn,trmo other downstream 367843 15030944 ~ 15034800 (+)
bnc2 bnc2,LOC107595060,LOC107737409,LOC107737408,LOC107678088,LOC107598241 other downstream 515502 15178603 ~ 15317624 (+)
G3599 NA other downstream 814997 15478098 ~ 15498680 (+)
G3647 NA other downstream 989992 15653093 ~ 15653381 (+)

Expression


Co-expression Network