trmo (trmo,LOC107580156)


Basic Information

Item Value
gene id trmo
gene name trmo,LOC107580156
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 15033169 ~ 15037691 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249651.1
ATTCTGTGAAAGTAGTTGGTCGGCCAACGTTTtcctcacaaaaacaaaacacgtgTTCTTAGCAGTGGATGTTCAGCAGCTGAcggaacaaacaaacaaacctgttTAACATAGCATCAAATCTTTTTCACTAAAATGTCGTCTCCAACATGTAGCTGTGCTGAACACGTCAGAAAACTCACACAGCAGGCGTCAGTGATGAGAAGAGAGATCAAAAACCTCAGACAGCAGATGGATGGAGCCATTCGAGCACATAAGAAGCAGATGTCATCCCTTCAGTCCACGCTGACAGGCTATAAACACCAAGAACCTGCACACTCAGTGAACAGCAGCCCAGCTCCTGCTCAGATCAGGCAGTTATTGGAGCAAGGACGTATTCATACGATACCGATTGGATACATCAACTCGTGTTTTGCTGTCAAAAATGGTACTCCACGACAACCCACCGTATGCAGTTCTTCTCGGGCCAGCTTAAAGATCCAGCCCTCTGTCTTCAATAACCCTGAGCATTCTTTAGTCGGCCTAGAACAATACTCCCATATCTGGATCATTTTCCTCTTCCATAAAAACGGGCAGATGAGCTACAAAGCCAAAGTAAAGCCGCCCCGTCTGAATGGCCGGAGGGTGGGGGTGTACTCCACCCGCAGCCCCCACAGGCCCAATGCTTTGGGACTGACCTTGGCTAAGCTGGAAGGAATCACAGAGGATACACTTCACTTGTCTGGCGTCGATATGATTGCTGGAACACCTGTGCTAGACATCAAGCCATATATTCCAGATTACGATTCTCCAAAAACAAGAAGAGATGATACCAACCGTGAATACAGACCAGCATCGCCGTCCACAGACTCTCAGATGCCCCTGGATCTAGATGAAGAAGCAAACGGCTCAGAGAGATCATCCGAACCCTCCTCGGAGATCAGAGCTTGTTCATCTGGAGCTTCGGCAGAAAGGTTTGGATCCGGTGATGTGACTGATGTGTTAGCAGAGGTGAAAGACTATGTCAAACAGCAACAGCTTTTCACTGAAAGTCCAGAAGACCGACAAACAGATTCTCCTGAATGCGCTTCAGTGACAACGACCCGTCTGAGTTCATCCAGTCTTAAGTTTGGATGCGAGGACTACGGTACCATCGCTGCCTGGGTCAGGGCACCCCCCGTCAGCGACCTAGATGTGCGCTTCACCGCAAATGCTGAGCAAGAGCTCAAAGAGTTTGTGCCCTGTGACAGTACAGACCGTACAAGACCAAAGTTCCGGTTCTTGAAAGGAGCAGAAGAAGCAGTGGAAGCCATCAGAGGTATTCTGTCAGCCGACCCTAGATCAGTATATCGCCGCACACGCTGTCAGGACCGCCTGTTCTTCTTCACCCTGGATACAGCTGACATCACCTGCTGGTTTGGAGATGGTTTTGCTGAGGTTGTGAGAGTCAAACCAATGCAGAGGGAAGAACTCACAAATGTCGTCTGAGATTTGTCAAACCCCTGCGTTTGCAGGAATAAATAGCAATGAATAATTtagcaaaaactgtaaattcTATAaacatttactcgccctcatatCGCGCCAAAAACTTCATTTTTTCTGTGGAACGTACGGTTTCtcatacaatggaagtcagtggtcaCCAGAATTGTTTGCTTACCatgattcttcaaaatatcagcTTTTGTGTTGCACAGAAGAAAAGGTCAGTaatgtctttttcatttttgggcaaactatcccttaatttgtgtttatggAATAATGATTAAATGGTCTGCTGCGCTATTAGCTAAAGGAAATTGCGAATACTGTCTTAAACCAGACTGATCCAGTATTCTCAACTAATttactaaaacataattttatagatatttttatggttttcagCATAGGTCTAAATGTTACCACTAAATATTATCACGCTGTCTTTAGCAAGCAACTATATTGTTATAATTTCATAGTGCCGCAATGATAATTTGTGTATggttatttattgcattttaatttgttaaatgttcCAGTAATGTGCTGGGTTTATTAAAGGTGCCGCATgaaattaaagcataaaatatcATGATATGTTTACAAGTACTGTATTCAGGAAAGATGCTAAGCTCATATGCACAATTCTGCAGCTATTTATTGTTCTCTAAAATGGCATTTCTCTCAGAAAGTCTGCTTTTGTTAGTGATTTCAAGCACTGCCAGTGTAACCGGTATTATTTTGACACCCTGGGTGGTCAGTTGGCAATAAAAACAGCGTATTGCA
>XM_043249659.1
TGGTCGGCCAACGTTTtcctcacaaaaacaaaacacgtgTTCTTAGCAGTGGATGTTCAGCAGCTGAcggaacaaacaaacaaacctgttTAACATAGCATCAAATCTTTTTCACTAAAATGTCGTCTCCAACATGTAGCTGTGCTGAACACGTCAGAAAACTCACACAGCAGGCGTCAGTGATGAGAAGAGAGATCAAAAACCTCAGCACAGACAGCAGATGGATGGAGCCATTCGAGCACATAAGAAGCAGATGTCATCCCTTCAGTCCACGCTGACAGGCTATAAACACCAAGAACCTGCACACTCAGTGAACAGCAGCCCAGCTCCTGCTCAGATCAGGCAGTTATTGGAGCAAGGACGTATTCATACGATACCGATTGGATACATCAACTCGTGTTTTGCTGTCAAAAATGGTACTCCACGACAACCCACCGTATGCAGTTCTTCTCGGGCCAGCTTAAAGATCCAGCCCTCTGTCTTCAATAACCCTGAGCATTCTTTAGTCGGCCTAGAACAATACTCCCATATCTGGATCATTTTCCTCTTCCATAAAAACGGGCAGATGAGCTACAAAGCCAAAGTAAAGCCGCCCCGTCTGAATGGCCGGAGGGTGGGGGTGTACTCCACCCGCAGCCCCCACAGGCCCAATGCTTTGGGACTGACCTTGGCTAAGCTGGAAGGAATCACAGAGGATACACTTCACTTGTCTGGCGTCGATATGATTGCTGGAACACCTGTGCTAGACATCAAGCCATATATTCCAGATTACGATTCTCCAAAAACAAGAAGAGATGATACCAACCGTGAATACAGACCAGCATCGCCGTCCACAGACTCTCAGATGCCCCTGGATCTAGATGAAGAAGCAAACGGCTCAGAGAGATCATCCGAACCCTCCTCGGAGATCAGAGCTTGTTCATCTGGAGCTTCGGCAGAAAGGTTTGGATCCGGTGATGTGACTGATGTGTTAGCAGAGGTGAAAGACTATGTCAAACAGCAACAGCTTTTCACTGAAAGTCCAGAAGACCGACAAACAGATTCTCCTGAATGCGCTTCAGTGACAACGACCCGTCTGAGTTCATCCAGTCTTAAGTTTGGATGCGAGGACTACGGTACCATCGCTGCCTGGGTCAGGGCACCCCCCGTCAGCGACCTAGATGTGCGCTTCACCGCAAATGCTGAGCAAGAGCTCAAAGAGTTTGTGCCCTGTGACAGTACAGACCGTACAAGACCAAAGTTCCGGTTCTTGAAAGGAGCAGAAGAAGCAGTGGAAGCCATCAGAGGTATTCTGTCAGCCGACCCTAGATCAGTATATCGCCGCACACGCTGTCAGGACCGCCTGTTCTTCTTCACCCTGGATACAGCTGACATCACCTGCTGGTTTGGAGATGGTTTTGCTGAGGTTGTGAGAGTCAAACCAATGCAGAGGGAAGAACTCACAAATGTCGTCTGAGATTTGTCAAACCCCTGCGTTTGCAGGAATAAATAGCAATGAATAATTtagcaaaaactgtaaattcTATAaacatttactcgccctcatatCGCGCCAAAAACTTCATTTTTTCTGTGGAACGTACGGTTTCtcatacaatggaagtcagtggtcaCCAGAATTGTTTGCTTACCatgattcttcaaaatatcagcTTTTGTGTTGCACAGAAGAAAAGGTCAGTaatgtctttttcatttttgggcaaactatcccttaatttgtgtttatggAATAATGATTAAATGGTCTGCTGCGCTATTAGCTAAAGGAAATTGCGAATACTGTCTTAAACCAGACTGATCCAGTATTCTCAACTAATttactaaaacataattttatagatatttttatggttttcagCATAGGTCTAAATGTTACCACTAAATATTATCACGCTGTCTTTAGCAAGCAACTATATTGTTATAATTTCATAGTGCCGCAATGATAATTTGTGTATggttatttattgcattttaatttgttaaatgttcCAGTAATGTGCTGGGTTTATTAAAGGTGCCGCATgaaattaaagcataaaatatcATGATATGTTTACAAGTACTGTATTCAGGAAAGATGCTAAGCTCATATGCACAATTCTGCAGCTATTTATTGTTCTCTAAAATGGCATTTCTCTCAGAAAGTCTGCTTTTGTTAGTGATTTCAAGCACTGCCAGTGTAACCGGTATTATTTTGACACCCTGGGTGGTCAGTTGGCAATAAAAACAGCGTATTGCA
>XM_043249668.1
TGGTCGGCCAACGTTTtcctcacaaaaacaaaacacgtgTTCTTAGCAGTGGATGTTCAGCAGCTGAcggaacaaacaaacaaacctgttTAACATAGCATCAAATCTTTTTCACTAAAATGTCGTCTCCAACATGTAGCTGTGCTGAACACGTCAGAAAACTCACACAGCAGGCGTCAGTGATGAGAAGAGAGATCAAAAACCTCAGGTAGACAGCAGATGGATGGAGCCATTCGAGCACATAAGAAGCAGATGTCATCCCTTCAGTCCACGCTGACAGGCTATAAACACCAAGAACCTGCACACTCAGTGAACAGCAGCCCAGCTCCTGCTCAGATCAGGCAGTTATTGGAGCAAGGACGTATTCATACGATACCGATTGGATACATCAACTCGTGTTTTGCTGTCAAAAATGGTACTCCACGACAACCCACCGTATGCAGTTCTTCTCGGGCCAGCTTAAAGATCCAGCCCTCTGTCTTCAATAACCCTGAGCATTCTTTAGTCGGCCTAGAACAATACTCCCATATCTGGATCATTTTCCTCTTCCATAAAAACGGGCAGATGAGCTACAAAGCCAAAGTAAAGCCGCCCCGTCTGAATGGCCGGAGGGTGGGGGTGTACTCCACCCGCAGCCCCCACAGGCCCAATGCTTTGGGACTGACCTTGGCTAAGCTGGAAGGAATCACAGAGGATACACTTCACTTGTCTGGCGTCGATATGATTGCTGGAACACCTGTGCTAGACATCAAGCCATATATTCCAGATTACGATTCTCCAAAAACAAGAAGAGATGATACCAACCGTGAATACAGACCAGCATCGCCGTCCACAGACTCTCAGATGCCCCTGGATCTAGATGAAGAAGCAAACGGCTCAGAGAGATCATCCGAACCCTCCTCGGAGATCAGAGCTTGTTCATCTGGAGCTTCGGCAGAAAGGTTTGGATCCGGTGATGTGACTGATGTGTTAGCAGAGGTGAAAGACTATGTCAAACAGCAACAGCTTTTCACTGAAAGTCCAGAAGACCGACAAACAGATTCTCCTGAATGCGCTTCAGTGACAACGACCCGTCTGAGTTCATCCAGTCTTAAGTTTGGATGCGAGGACTACGGTACCATCGCTGCCTGGGTCAGGGCACCCCCCGTCAGCGACCTAGATGTGCGCTTCACCGCAAATGCTGAGCAAGAGCTCAAAGAGTTTGTGCCCTGTGACAGTACAGACCGTACAAGACCAAAGTTCCGGTTCTTGAAAGGAGCAGAAGAAGCAGTGGAAGCCATCAGAGGTATTCTGTCAGCCGACCCTAGATCAGTATATCGCCGCACACGCTGTCAGGACCGCCTGTTCTTCTTCACCCTGGATACAGCTGACATCACCTGCTGGTTTGGAGATGGTTTTGCTGAGGTTGTGAGAGTCAAACCAATGCAGAGGGAAGAACTCACAAATGTCGTCTGAGATTTGTCAAACCCCTGCGTTTGCAGGAATAAATAGCAATGAATAATTtagcaaaaactgtaaattcTATAaacatttactcgccctcatatCGCGCCAAAAACTTCATTTTTTCTGTGGAACGTACGGTTTCtcatacaatggaagtcagtggtcaCCAGAATTGTTTGCTTACCatgattcttcaaaatatcagcTTTTGTGTTGCACAGAAGAAAAGGTCAGTaatgtctttttcatttttgggcaaactatcccttaatttgtgtttatggAATAATGATTAAATGGTCTGCTGCGCTATTAGCTAAAGGAAATTGCGAATACTGTCTTAAACCAGACTGATCCAGTATTCTCAACTAATttactaaaacataattttatagatatttttatggttttcagCATAGGTCTAAATGTTACCACTAAATATTATCACGCTGTCTTTAGCAAGCAACTATATTGTTATAATTTCATAGTGCCGCAATGATAATTTGTGTATggttatttattgcattttaatttgttaaatgttcCAGTAATGTGCTGGGTTTATTAAAGGTGCCGCATgaaattaaagcataaaatatcATGATATGTTTACAAGTACTGTATTCAGGAAAGATGCTAAGCTCATATGCACAATTCTGCAGCTATTTATTGTTCTCTAAAATGGCATTTCTCTCAGAAAGTCTGCTTTTGTTAGTGATTTCAAGCACTGCCAGTGTAACCGGTATTATTTTGACACCCTGGGTGGTCAGTTGGCAATAAAAACAGCGTATTGCA
>XM_043249675.1
TGGTCGGCCAACGTTTtcctcacaaaaacaaaacacgtgTTCTTAGCAGTGGATGTTCAGCAGCTGAcggaacaaacaaacaaacctgttTAACATAGCATCAAATCTTTTTCACTAAAATGTCGTCTCCAACATGTAGCTGTGCTGAACACGTCAGAAAACTCACACAGCAGGCGTCAGTGATGAGAAGAGAGATCAAAAACCTCAGGTAGCACAGACAGCAGATGGATGGAGCCATTCGAGCACATAAGAAGCAGATGTCATCCCTTCAGTCCACGCTGACAGGCTATAAACACCAAGAACCTGCACACTCAGTGAACAGCAGCCCAGCTCCTGCTCAGATCAGGCAGTTATTGGAGCAAGGACGTATTCATACGATACCGATTGGATACATCAACTCGTGTTTTGCTGTCAAAAATGGTACTCCACGACAACCCACCGTATGCAGTTCTTCTCGGGCCAGCTTAAAGATCCAGCCCTCTGTCTTCAATAACCCTGAGCATTCTTTAGTCGGCCTAGAACAATACTCCCATATCTGGATCATTTTCCTCTTCCATAAAAACGGGCAGATGAGCTACAAAGCCAAAGTAAAGCCGCCCCGTCTGAATGGCCGGAGGGTGGGGGTGTACTCCACCCGCAGCCCCCACAGGCCCAATGCTTTGGGACTGACCTTGGCTAAGCTGGAAGGAATCACAGAGGATACACTTCACTTGTCTGGCGTCGATATGATTGCTGGAACACCTGTGCTAGACATCAAGCCATATATTCCAGATTACGATTCTCCAAAAACAAGAAGAGATGATACCAACCGTGAATACAGACCAGCATCGCCGTCCACAGACTCTCAGATGCCCCTGGATCTAGATGAAGAAGCAAACGGCTCAGAGAGATCATCCGAACCCTCCTCGGAGATCAGAGCTTGTTCATCTGGAGCTTCGGCAGAAAGGTTTGGATCCGGTGATGTGACTGATGTGTTAGCAGAGGTGAAAGACTATGTCAAACAGCAACAGCTTTTCACTGAAAGTCCAGAAGACCGACAAACAGATTCTCCTGAATGCGCTTCAGTGACAACGACCCGTCTGAGTTCATCCAGTCTTAAGTTTGGATGCGAGGACTACGGTACCATCGCTGCCTGGGTCAGGGCACCCCCCGTCAGCGACCTAGATGTGCGCTTCACCGCAAATGCTGAGCAAGAGCTCAAAGAGTTTGTGCCCTGTGACAGTACAGACCGTACAAGACCAAAGTTCCGGTTCTTGAAAGGAGCAGAAGAAGCAGTGGAAGCCATCAGAGGTATTCTGTCAGCCGACCCTAGATCAGTATATCGCCGCACACGCTGTCAGGACCGCCTGTTCTTCTTCACCCTGGATACAGCTGACATCACCTGCTGGTTTGGAGATGGTTTTGCTGAGGTTGTGAGAGTCAAACCAATGCAGAGGGAAGAACTCACAAATGTCGTCTGAGATTTGTCAAACCCCTGCGTTTGCAGGAATAAATAGCAATGAATAATTtagcaaaaactgtaaattcTATAaacatttactcgccctcatatCGCGCCAAAAACTTCATTTTTTCTGTGGAACGTACGGTTTCtcatacaatggaagtcagtggtcaCCAGAATTGTTTGCTTACCatgattcttcaaaatatcagcTTTTGTGTTGCACAGAAGAAAAGGTCAGTaatgtctttttcatttttgggcaaactatcccttaatttgtgtttatggAATAATGATTAAATGGTCTGCTGCGCTATTAGCTAAAGGAAATTGCGAATACTGTCTTAAACCAGACTGATCCAGTATTCTCAACTAATttactaaaacataattttatagatatttttatggttttcagCATAGGTCTAAATGTTACCACTAAATATTATCACGCTGTCTTTAGCAAGCAACTATATTGTTATAATTTCATAGTGCCGCAATGATAATTTGTGTATggttatttattgcattttaatttgttaaatgttcCAGTAATGTGCTGGGTTTATTAAAGGTGCCGCATgaaattaaagcataaaatatcATGATATGTTTACAAGTACTGTATTCAGGAAAGATGCTAAGCTCATATGCACAATTCTGCAGCTATTTATTGTTCTCTAAAATGGCATTTCTCTCAGAAAGTCTGCTTTTGTTAGTGATTTCAAGCACTGCCAGTGTAACCGGTATTATTTTGACACCCTGGGTGGTCAGTTGGCAATAAAAACAGCGTATTGCA

Function

symbol description
trmo Predicted to enable tRNA (adenine-N6-)-methyltransferase activity. Orthologous to human TRMO (tRNA methyltransferase O).

NR:

description
PREDICTED: tRNA (adenine(37)-N6)-methyltransferase isoform X1

GO: NA

KEGG:

id description
K22900 TRMO, trmO; tRNA (adenine37-N6)-methyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249651.1 True 2253 mRNA 0.44 6 15033169 15037691
XM_043249659.1 False 2242 mRNA 0.44 6 15033169 15037675
XM_043249668.1 False 2241 mRNA 0.44 6 15033169 15037675
XM_043249675.1 False 2246 mRNA 0.44 6 15033169 15037675

Neighbor

gene id symbol gene type direction distance location
anp32b anp32b,LOC107595056 coding downstream 3811 15024645 ~ 15029358 (-)
ints12 ints12,LOC107714643,LOC107695298,LOC107595100 coding downstream 53751 14976363 ~ 14979418 (-)
ppa2 ppa2,LOC107714645,LOC107595053,LOC107695313 coding downstream 70036 14959165 ~ 14963133 (-)
cdkn2a/b LOC107595098,LOC107714625,LOC107695349 coding downstream 168036 14862844 ~ 14865133 (-)
pdcd4a pdcd4a,LOC107695387,LOC107595047,LOC107714648,LOC107757625,LOC107700321 coding downstream 205143 14816866 ~ 14828026 (-)
foxe1 foxe1,LOC107598243,LOC107757598,LOC107700287 coding upstream 13128 15050819 ~ 15052876 (-)
sh3gl2a sh3gl2,LOC107595059,LOC107714635,LOC107757631,LOC107700329,LOC107695241,LOC107598242 coding upstream 25746 15063437 ~ 15079410 (-)
cntln cntln,LOC107595061 coding upstream 59330 15097021 ~ 15178446 (-)
pspc1 pspc1 coding upstream 489463 15527154 ~ 15581541 (-)
dnajb14 dnajb14 coding upstream 547888 15585579 ~ 15626410 (-)
G3546 NA non-coding downstream 28881 15001285 ~ 15004288 (-)
G3502 NA non-coding downstream 184593 14848025 ~ 14848576 (-)
LOC122336348 usp53b,LOC107714652,LOC107572698,LOC107695415,LOC107598280,LOC107700316,LOC108442608 non-coding downstream 259249 14772740 ~ 14773920 (-)
LOC122336242 NA non-coding downstream 260439 14771467 ~ 14772730 (-)
G3495 pdcd4a,LOC107598278,LOC107700321,LOC107757625,LOC107695387,LOC107595047,LOC107714648 non-coding downstream 274144 14758120 ~ 14759025 (-)
G3570 NA non-coding upstream 191645 15229336 ~ 15229753 (-)
G3572 bnc2,LOC107595060,LOC102789865 non-coding upstream 237193 15274884 ~ 15275311 (-)
G3577 bnc2,LOC107737409,LOC107737408,LOC107678088,LOC107595060 non-coding upstream 266297 15303988 ~ 15306245 (-)
G3578 NA non-coding upstream 268957 15306648 ~ 15306904 (-)
G3581 NA non-coding upstream 272644 15310335 ~ 15310542 (-)
G3515 coro2a other downstream 3549 15020642 ~ 15029620 (-)
G3522 NA other downstream 107806 14925085 ~ 14925363 (-)
cxxc4 cxxc4,LOC107695705 other downstream 114383 14898201 ~ 14918786 (-)
G3491 gpank1 other downstream 284194 14746829 ~ 14748975 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other downstream 318623 14686596 ~ 14714546 (-)
G3571 NA other upstream 192848 15230539 ~ 15230886 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other upstream 1031486 16069177 ~ 16073920 (-)
march4l zgc:153256,march9,LOC107719730,LOC107654275,LOC107556712,LOC107707834,LOC107699089 other upstream 1122001 16159692 ~ 16198263 (-)
igf2bp2b igf2bp2b,LOC107704342,LOC107573191,LOC107699092,LOC107556709 other upstream 1296511 16334202 ~ 16359025 (-)
mzt1 mzt1,si:dkey-15d12.2,LOC107556706 other upstream 1409397 16447088 ~ 16448519 (-)

Expression


Co-expression Network