scpp7 (scpp7,LOC107551652,LOC107556796,LOC107664542,LOC107674205)


Basic Information

Item Value
gene id scpp7
gene name scpp7,LOC107551652,LOC107556796,LOC107664542,LOC107674205
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 20604240 ~ 20605941 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249788.1
AAATCCTCCTCAACAGTCCCGATCAAGCTCATCAGTCTTAAACAAAGACATTATCATTCAACATGAAAACCCTCTTTTTGCTGGCATTTGTCATTGGAGTGGCCTACTGTGCTCCGCAATTGATGTATTACGAGCTTGAATACAAACCTGTCCTGGCTCCACAGGCTCTTCCTGCTGGCGCCGCTGCAGCTAGACCTTCAGAAGTCGAAATTcttttggCAGCTCAGCAGGCTGCAGCTGGTGTTCCTGCTCAACCTGTCCGTGGCTTCATTAAGCATGAGATTCCCCAGCCCGGAGGCAAAGAAAGCCTTGAAGTTCTGTACCCTTTTGACTTTTCTCAAAATGCTCCTGCCGCCCCGGCTGTTCCGGCTGCCCCGGCTGTTCCTGCCGTTCCTGCCGTTCCTGCCGTTCCTGCCATTCCCGCTGTTCCCGCTGCCCCAgccCCTGTTCCAAATGACGATGACGATGATCATGATGATTAAACCAGACTGATGAACAGATAAGCTGACCACCAGTTCCTGAATGACAAAGAAGCTGCTTGTAGTGTTTAGCAAATTGACTGCATAAATGCTTTCCCGCATTAGAAATAATGCAGATCGATGAAAAGGTTCTTTCTCAGTGGCTTGATGCATGAGAGCCATAAAAATCATTGCTTTTTTGCTGCcatgtttttaaaacttgatTTATAATAAACCGTTCAATCAA

Function

NR:

description
uncharacterized protein LOC110533145

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249788.1 True 705 mRNA 0.47 9 20604240 20605941

Neighbor

gene id symbol gene type direction distance location
ambn NA coding upstream 998 20593806 ~ 20603242 (+)
odam LOC107674208,LOC107556797,LOC107746942,LOC107552703,LOC107664548 coding upstream 16415 20586024 ~ 20587825 (+)
scpp9 LOC107674192 coding upstream 21458 20581052 ~ 20582782 (+)
si:dkey-22i16.9 NA coding upstream 23866 20576845 ~ 20580374 (+)
zgc:66472 LOC107730520,LOC107664577,LOC107551622 coding upstream 127958 20470299 ~ 20476282 (+)
scpp5 scpp5,LOC107552310 coding downstream 451 20606392 ~ 20609673 (+)
enam si:dkey-22i16.3,LOC107664558,LOC107730507,LOC107551644,LOC107674207,LOC107746966,LOC107556794 coding downstream 5482 20611423 ~ 20613861 (+)
cnga1a si:dkey-22i16.2,LOC107746771,LOC107674260,LOC107556780,LOC108260510,LOC108434387 coding downstream 9886 20615827 ~ 20619140 (+)
tacr3a tacr3,tacr3a,LOC107746781,LOC107556806,LOC107674253,LOC107552719,LOC108411976 coding downstream 25016 20630957 ~ 20662179 (+)
bdh2 bdh2,LOC107746975,LOC107674194 coding downstream 71765 20677706 ~ 20683465 (+)
G4853 NA non-coding upstream 143672 20460337 ~ 20460568 (+)
G4852 NA non-coding upstream 144057 20459499 ~ 20460183 (+)
LOC122345303 NA non-coding upstream 199982 20401851 ~ 20404258 (+)
G4829 NA non-coding upstream 224908 20377325 ~ 20379332 (+)
G4823 NA non-coding upstream 237657 20365859 ~ 20366583 (+)
G4976 NA non-coding downstream 114338 20720279 ~ 20721036 (+)
G4984 ctnna2 non-coding downstream 322356 20928297 ~ 20930642 (+)
G4991 NA non-coding downstream 411279 21017220 ~ 21020726 (+)
G4996 NA non-coding downstream 471098 21077039 ~ 21077896 (+)
G5028 smox,LOC107719767,LOC107689473,LOC107551688,LOC107692173,LOC107551695,LOC107567053 non-coding downstream 962161 21568102 ~ 21571149 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other upstream 360891 20241818 ~ 20243349 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other upstream 458384 20142461 ~ 20145856 (+)
scoca scoca,scoc,LOC107671340,LOC107712029,LOC107674238,LOC107737083,LOC107556533 other upstream 827190 19715553 ~ 19777050 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other upstream 1081841 19521084 ~ 19522399 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other upstream 2319596 18247250 ~ 18284644 (+)
LOC122348864 ctnna2,LOC107706127 other downstream 715521 21321462 ~ 21361440 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other downstream 984936 21590877 ~ 21620592 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other downstream 1026274 21632215 ~ 21635052 (+)
LOC122348949 LOC107676845,LOC107560973,LOC107718848,LOC107692180,LOC107603005,LOC107746297,LOC107735984 other downstream 2234747 22840688 ~ 22851393 (+)
G5559 epc1a,LOC107568137,LOC107654560,LOC107753261,LOC107653121,LOC107582192,LOC107706605 other downstream 2937123 23543064 ~ 23554625 (+)

Expression


Co-expression Network