si:ch211-145b13.6


Basic Information

Item Value
gene id si:ch211-145b13.6
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 14804654 ~ 14806247 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249844.1
CAGCTGAAGGGCAGGAAGGAAATGGCAGAGTACAGCCTTGATAAGCTTTCCTGGAGTGTATTTTAGAGTCAGGTTCTGAGCGTTCGCTTTCTTCGTGCTTAACTGATTTCATAAATATCAGATCTTAGGGGACGACTTGAACTAATAGAATGGGACGTTTGAGGTTTCCTGTGATTCCCGTGGTGCTCTTATACACAACGGTATTGCAGACGACTGAAGAAGTGATACAGATGGGCATGTTTCCTGAAGCTGCCGATTACTCCTTCCAGAATTGTCGGAGCAAAATGCTGCAAATGGTCACAGAAAGTGGAGGTCTGCTGCAGACGGAGCTGAACAACAATCCAGATTTCAAAGCTATTTGGCAGGACAGTGCAGCATGCAGCGAGACCATTCCAGGGGGTACGCCTCAGCATGCGGCTGCCCTGAAGAGCTATGCAGACGCTAGTCCTACATTTCTTAAAGAATTCAGAAAGTTGGCTAAGACTAACAAGGGAAGTTCAACGTACAGAGATGAGTTTCCTttcaaatctctttttttcctgctgACAGATGCCGTGCAACTCTTAGGCCAAAACAAATGCTGTACAGTGTACTTCGGTACGGAGAAGGAATATAACACCAAAATCGGTGAGAAAGTGCGTTTTGAGAGTTTTGTTGCAGCAACAGTGGAACATAGTGCTGCAGCTGAAGATGCCAGTGACAGCGATAGCACTGGGACCGTTTTCAACATAATATCCTGTTCTCTGATCTGCTATGaagattataaatgtatttcagaaGAAATTCTGTCAGAGAGAGAATTTTTCATATCACCCAATGAAGTTTTCACAGTGAAGGCAATCACTACTAGAAGTGGTACTGATACCTTTAAAGAGATCACCTTAACACATTCTGACTTTCAAAGTTCTTCTAACTGCAGCAGCCTCGACAGGTTGCCCAAAGAATCTAAAGCGTCGTCTTCAAGTTTCCTGAGTTCCAGTTCCCTGAATCTTATGGCTTCTTTGCTCCCGCTGTACTACTACACACTGACTCTCTAATATACTTTGTTTCCCTTTTCACAAAACTGCAAAGTTAAAGTTACTTGAATGTGACGGTATATCAGTGTTCTTTACCTATTtacataatacaataaattacttttaatgca
>XM_043249851.1
CAGCTGAAGGGCAGGAAGGAAATGGCAGAGTACAGCCTTGATAAGCTTTCCTGGAGTGTATTTTAGAGTCAGGTTCTGAGCGTTCGCTTTCTTCGTGCTTAACTGATTTCATAAATATCAGATCTTAGGGGACGACTTGAACTAATAGAATGGGACGTTTGAGGTTTCCTGTGATTCCCGTGGTGCTCTTATACACAACGGTATTGCAGACGACTGAAGAAGTGATACAGATGGGCATGTTTCCTGAAGCTGCCGATTACTCCTTCCAGAATTGTCGGAGCAAAATGCTGCAAATGGTCACAGAAAGTGGAGGTCTGCTGCAGACGGAGCTGAACAACAATCCAGATTTCAAAGCTATTTGGCAGGACAGTGCAGCATGCAGCGAGACCATTCCAGGGGATGCCGTGCAACTCTTAGGCCAAAACAAATGCTGTACAGTGTACTTCGGTACGGAGAAGGAATATAACACCAAAATCGGTGAGAAAGTGCGTTTTGAGAGTTTTGTTGCAGCAACAGTGGAACATAGTGCTGCAGCTGAAGATGCCAGTGACAGCGATAGCACTGGGACCGTTTTCAACATAATATCCTGTTCTCTGATCTGCTATGaagattataaatgtatttcagaaGAAATTCTGTCAGAGAGAGAATTTTTCATATCACCCAATGAAGTTTTCACAGTGAAGGCAATCACTACTAGAAGTGGTACTGATACCTTTAAAGAGATCACCTTAACACATTCTGACTTTCAAAGTTCTTCTAACTGCAGCAGCCTCGACAGGTTGCCCAAAGAATCTAAAGCGTCGTCTTCAAGTTTCCTGAGTTCCAGTTCCCTGAATCTTATGGCTTCTTTGCTCCCGCTGTACTACTACACACTGACTCTCTAATATACTTTGTTTCCCTTTTCACAAAACTGCAAAGTTAAAGTTACTTGAATGTGACGGTATATCAGTGTTCTTTACCTATTtacataatacaataaattacttttaatgca

Function

GO:

id name namespace
GO:0030097 hemopoiesis biological_process
GO:0030099 myeloid cell differentiation biological_process
GO:0002520 immune system development biological_process
GO:0048534 hematopoietic or lymphoid organ development biological_process
GO:0002376 immune system process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249844.1 True 1147 mRNA 0.42 4 14804654 14806247
XM_043249851.1 False 997 mRNA 0.42 5 14804654 14806247

Neighbor

gene id symbol gene type direction distance location
kcnip4b si:ch211-145b13.5,LOC107757593,LOC107695828,LOC107700280,LOC107714629 coding downstream 800 14796045 ~ 14803854 (-)
synpo2b LOC107572695,LOC107695836 coding downstream 11288 14786399 ~ 14793366 (-)
LOC122347500 myoz2,myoz2b,LOC107695402,LOC107700320 coding downstream 19849 14779201 ~ 14784805 (-)
LOC122342957 NA coding downstream 60978 14742645 ~ 14743676 (-)
LOC122342943 usp53b,LOC107714652,LOC107572698,LOC107695415,LOC107757572,LOC108442608,LOC107700316 coding downstream 98011 14704493 ~ 14706643 (-)
gpank1 gpank1,LOC107682883 coding upstream 1655 14807902 ~ 14812747 (-)
pdcd4a pdcd4a,LOC107695387,LOC107595047,LOC107714648,LOC107757625,LOC107700321 coding upstream 10619 14816866 ~ 14828026 (-)
cdkn2a/b LOC107595098,LOC107714625,LOC107695349 coding upstream 56597 14862844 ~ 14865133 (-)
ppa2 ppa2,LOC107714645,LOC107595053,LOC107695313 coding upstream 152918 14959165 ~ 14963133 (-)
ints12 ints12,LOC107714643,LOC107695298,LOC107595100 coding upstream 170116 14976363 ~ 14979418 (-)
LOC122336348 usp53b,LOC107714652,LOC107572698,LOC107695415,LOC107598280,LOC107700316,LOC108442608 non-coding downstream 30734 14772740 ~ 14773920 (-)
LOC122336242 NA non-coding downstream 31924 14771467 ~ 14772730 (-)
G3495 pdcd4a,LOC107598278,LOC107700321,LOC107757625,LOC107695387,LOC107595047,LOC107714648 non-coding downstream 45629 14758120 ~ 14759025 (-)
G3493 NA non-coding downstream 54480 14749387 ~ 14750174 (-)
LOC122353106 NA non-coding downstream 62018 14742108 ~ 14742636 (-)
G3502 NA non-coding upstream 41778 14848025 ~ 14848576 (-)
G3546 NA non-coding upstream 195038 15001285 ~ 15004288 (-)
G3570 NA non-coding upstream 423089 15229336 ~ 15229753 (-)
G3572 bnc2,LOC107595060,LOC102789865 non-coding upstream 468637 15274884 ~ 15275311 (-)
G3577 bnc2,LOC107737409,LOC107737408,LOC107678088,LOC107595060 non-coding upstream 497741 15303988 ~ 15306245 (-)
G3491 gpank1 other downstream 55679 14746829 ~ 14748975 (-)
myoz2b myoz2,myoz2b,LOC107695402,LOC107700320 other downstream 90108 14686596 ~ 14714546 (-)
usp53b fabp2,usp53b,LOC107580697,LOC107572698,LOC107714652,LOC107695415,LOC107700316,LOC107598280 other downstream 116794 14661474 ~ 14687860 (-)
LOC122350629 gatb,LOC107695556,LOC106602370,LOC107695902 other downstream 909370 13881893 ~ 13895284 (-)
LOC122350606 gatb,LOC107695556,LOC107695902 other downstream 961990 13829463 ~ 13842664 (-)
cxxc4 cxxc4,LOC107695705 other upstream 91954 14898201 ~ 14918786 (-)
G3522 NA other upstream 118838 14925085 ~ 14925363 (-)
G3515 coro2a other upstream 214395 15020642 ~ 15029620 (-)
G3571 NA other upstream 424292 15230539 ~ 15230886 (-)
alg11 alg11,LOC107556718,LOC107588826,LOC107705036 other upstream 1262930 16069177 ~ 16073920 (-)

Expression


Co-expression Network