CI01000000_10417521_10426279 (SLC7A3B, SLC7A3)


Basic Information

Item Value
gene id CI01000000_10417521_10426279
gene name SLC7A3B, SLC7A3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 10417402 ~ 10426279 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_10417521_10426279.mRNA
ATGTTGGCAGTCATTGCACGTTTTCTTGATGTTTACTTTACCAGTGCCTTCAGCTTTATCCCTGTCTCCTCAACGTTATCCATCATGATTAAGAATAAACTAGCCTCCTTTGGGAAGATGATGTTGAGGCGTCGTATACTGGACACCTCTCAGGACGAAACCCGCTTCGCTCGCTGTCTCACCACTCTTGACCTCATAGCCCTCGGTGTGGGGGCGACACTGGGTGCAGGTGTGTATGTCCTGGCTGGGCAAGTGGCCCGAGAGAAGGCTGGACCTGCAATCGTGCTGTCTTTTCTCATTGCGGCCTTGTCCTCTGTCCTCGCTGGCTTGTGCTATGCTGAATTTGGTGCACGTGTTCCCAAAACGGGATCCGCTTACCTGTACAGCTACGTGACCGTGGGTGAAATATGGGCCTTCATCACGGGATGGAACCTCATTCTCTCATATGTGATTGGCACAGCTAGTGTGGCACGAGCTTGGAGCTCAACTTTTGATGATCTAGTGCAGAAGAAGATCTCTGTTTTCTTCAATGGCTCCATGTCATTTCCAGACACTGGAAAAGTGTTAGCGGAGTATCCAGATCTGTTTGCCCTCATCCTGGTCATGTTGCTCACTGGATTATTGGCATTTGGTGTGAGTGAGTCTGCACTTGTCAACAAGATCTTCACAGGAATCAACCTGGTGGTTTTGACATTTGTCATCATATCAGCCTTTGTGAAAGGTGATACTGCCAACTGGAACCTTACTGTGGAGGACTACCTTAACGGCACTAACATGTCTCAAGCACACAACATTGAAAAAGAATTCGGCTCAGGGGGCTTTGCACCATTTGGCTTATCCGGAATCCTTTCTGGCGCTGCTACATGCTTCTATGCATTTGTTGGTTTCGACTGCATTGCAACCACAAGTGAGGAGGCCAAAAACCCCATGCGTTCCATCCCGATCGGCATAGTGGCCTCTCTGCTCATCTGCTTTTTTGCCTACTTCGGAGTGTCTGCAGCGCTCACACTCATGATGCCATATTACAAGCTGAACGTTGAGAGTCCACTTCCTGAGGCCTTTGAATATGTGAACTGGAAGCCTGCTCGCTATATTGTGGCTGTGGGGTCTCTGTGTGCCCTTTCCACCAGCTTGTTGGGCTCCATGTTCCCTATGCCTCGTGTGATTTATGCTATGGCTGAGGACGGTCTGCTCTTTCGCTCCCTCTCCCGCATGCACAAGAAAACCAAGACACCCATGCTGGCAACCATTGTGTCTGGCATTGTAGCAGCCCTGATGGCCTTCCTGTTTGATCTCGCTGCCTTGGTGGACTTGATGTCAATCGGGACCCTGCTGGCATACACTCTGGTCGCTGTGTGTGTACTCATTCTCCGGTACCAGCCAGGCAGCCTTGGCTCTAGTGGTGCAGATGAGAAGCCATTGGAACTACAGAGGCTGGAGGCTAAAGGAGCCATGGCAGATGTGGATAGTGGGGATGAGTACAGCCAGGACCTGGAGACAACTCCCCTTAAGGAGAGGTTTTCCATCAGGATGCTGGTGCATCCTATCTCTGATGTACCCACCAAGATTTCGGGCATCATTGTTTACTCTGCCACTGGCACCATATCTGTGCTGTTCACTATGCTGTGTGTGGTGCTGTCAGTGTACATTGAGCAGGTGGGGATGGGCAGCCCTTTTTATATCACTTTGGTTGTTATCCTGTCTGTTCTGTCCTCTGTCTGCATCGTCATCATCTGGCGACAGCCGCAGAGTAAAGAGGATATCAGTTTCAAGGTGCCTTTTCTCCCCATCCTGCCACTAGTCAGTATGTTTGTAAATATTTACCTCATGATGCAATTGGATGGACCTACATGGGTTCGTTTCGCAGTATGGATGGCTTTTGGTTTTGTCATTTATTTTGCGTATGGAATAAGGAACAGCTCTGAGGGTAAAAACAGTTCCCCACAAAAATTTGAGCCCATTTTTCAAGCAAAGAAGCCAATCTACCTGTCTGGAGATGACAGTGAACGTGAGGGGGCCACACCTTAAGAAGAGCGACTGGATTGGTATGGCAGCTATGTTACAACCGGTTTTGTAAAATGCTGTTGTCACTTTAATTTTTGCACCTTATAATTTTTCTGAAGTATGCATCAAAAAGTGACAAAAAA

Function

symbol description
slc7a3b Predicted to enable transmembrane transporter activity. Predicted to act upstream of or within L-alpha-amino acid transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of membrane. Orthologous to human SLC7A3 (solute carrier family 7 member 3).
slc7a3 Enables L-arginine transmembrane transporter activity; L-lysine transmembrane transporter activity; and L-ornithine transmembrane transporter activity. Involved in L-arginine import across plasma membrane; L-lysine import across plasma membrane; and L-ornithine import across plasma membrane. Part of plasma membrane.

GO:

id name namespace
GO:0015297 antiporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_10417521_10426279.mRNA True 2147 mRNA 0.49 12 10417402 10426279

Neighbor

gene id symbol gene type direction distance location
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 coding downstream 7452 10407395 ~ 10409950 (-)
CI01000000_10373343_10374473 NA coding downstream 42916 10372427 ~ 10374486 (-)
CI01000000_10333352_10335572 FOSL1A coding downstream 81830 10331605 ~ 10335572 (-)
CI01000000_10320014_10324130 FIBP, FIBPA coding downstream 92417 10319775 ~ 10324985 (-)
CI01000000_10317081_10317296 NA coding downstream 99806 10316236 ~ 10317596 (-)
CI01000000_10431043_10433001 NA coding upstream 4755 10431034 ~ 10433199 (-)
CI01000000_10448446_10452941 NA coding upstream 21993 10448272 ~ 10452941 (-)
CI01000000_10465427_10467327 NA coding upstream 38924 10465203 ~ 10467327 (-)
CI01000000_10468528_10473166 NA coding upstream 41273 10467552 ~ 10473166 (-)
CI01000000_10474520_10476010 NA coding upstream 48132 10474411 ~ 10476010 (-)
G7946 NA non-coding downstream 46255 10369020 ~ 10371147 (-)
G8016 NA non-coding downstream 71906 10344942 ~ 10345496 (-)
G7924 NA non-coding downstream 195128 10221012 ~ 10222274 (-)
G7884 NA non-coding downstream 268322 10147499 ~ 10149080 (-)
G7879 NA non-coding downstream 312648 10103510 ~ 10104754 (-)
G8028 NA non-coding upstream 7742 10434021 ~ 10434286 (-)
G7968 NA non-coding upstream 159318 10585597 ~ 10589211 (-)
G7991 NA non-coding upstream 278620 10704899 ~ 10719278 (-)
G7985 NA non-coding upstream 346148 10772427 ~ 10774179 (-)
G7996 NA non-coding upstream 369081 10795360 ~ 10796229 (-)
G3931 NA other downstream 4013877 6157013 ~ 6403525 (-)
G3716 NA other downstream 4416633 6000407 ~ 6000769 (-)
G3650 NA other downstream 4876521 5540463 ~ 5540881 (-)
CI01000000_05465020_05466303 NA other downstream 4950886 5464058 ~ 5466516 (-)
CI01000000_10824957_10825464 MMGT1, TMM32 other upstream 398132 10824324 ~ 10825464 (-)
G8125 NA other upstream 613990 11040269 ~ 11040909 (-)
G8699 NA other upstream 2859045 13272585 ~ 13311429 (-)
G9036 NA other upstream 3300521 13726800 ~ 13727090 (-)
G9602 NA other upstream 3914723 14341002 ~ 14346534 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location