LOC122352554


Basic Information

Item Value
gene id LOC122352554
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 22065793 ~ 22067928 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043249999.1
cacacaaaaatgtctgCCAAACCATCAAGCACCAGTCCACCAAAGACTTACAAAGCACCAGCCATTACAACAACCAAGGCAAATGCAACAAGTGCCATTTtaaaaactgcagcaaaatCAACAAGTACTCCAAAAACAACTGAAAGGAGAACAACGACAACCAAACCACCACCAACTACTCTAGCATCTCTGGATCCTCCCACAGAAAAAGAGGGATACCTTTATCTAAAATTTAGAATAGTGCGGATTTTCATTCCAGATTACAATGATAAATCAACATCTGCTTATAAAGCACTGGAACGGAATGTAACAACTGAGcTTAATCGGGGATATAGATATGTGTTCCCAACTATATTTTTGAGAGTGTTTATCATAGAGTTTTGgcCTGGCTCTGTGGGGGTAACATCTCAgctaatttttcaaaaccagagtgtGGTCCCGAACATAACAGATGTAGTGGATTCTTTGAAAGACACAATTAATGAATACATTGTCAACTTGAATGTCATCACATCCAGTATTTCTGCTTATCCACGAAATGAGACCACATCAGCCACCACTCCGAGTGTCACGACAGGGGCTACGACAATGGAAAGCAGTCAGTTTGCTACAACCATTTCATCTGCCAGTTCAGTGGCACAAAGCAGAAACAATGAAATGGtcaatttctttcttctctgtaTCCTTGTTAAATTCTTTTTGATAGAGCTTTAATACTTACATAActgttgtatatattttagtaaatagcACATAACCAACtgttacaattatattatatattattgctaatatattgtaaaaaaaaaaaaaaaagtcatttagggaaataatttaatgattaaattcCACAATAAATTTGATGTACTATAtgtattgttgtaaaatattttttcatatataatttttaaagcaCTCGTAAATCCATGACAATGATGCCCAACCACTTACATTACTGTTTAGACGAATAAACATTCagcagtcttttttttctttattttttccatagAACATTTTGAATTGCACAGAAATGGTTATAGaatgattatgaaaatattgtcatcaagctatttttaataaccttaaaaaaaaggttatatcTCTTGGTAACTTCCtccaattaaaaaatgtacacttcaCAATgtgtacaatatttttaaacaagcttgtgatcatttatttaacaaatatattgctCATTGCTATGGTTATTGTATTAACTAAGGaaggttatttaaaaagtgttaacCGATCATAATGAAAAAGTAGATTTTTGAAAgttgatcatttaaaaagttgATTTTTGTATGTACTGAAAAAGTCgctaaatcaataaaacatgcataataaacttttttttcctttcgtCATAATTATATTCTTCATGATCATCATATTCAAATCAGACCTGGTACTGCAATATATATCCTTGGTATCTGTAATAGACATAGCCACTTCCAATTCTGTAATTTACTCAGATTTTGACAAACGTggctcaaaaagaaaaaaaaaaaagcctggttCCTGTAGAACAGAATTTTTAGTTTTGAGTGAACAGTCACTAAGAATTACAGAAATGTAGCTTTTCACCATTTCTGACTAAACACCAAAGTACAGGCAGTTCCACCACAATATCATTCAAGAGGTTGAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043249999.1 True 1652 mRNA 0.32 4 22065793 22067928

Neighbor

gene id symbol gene type direction distance location
si:ch211-151p13.8 si:ch211-151p13.8,LOC107692197,LOC107746734,LOC107676123,LOC107551838,LOC107720312,LOC107602984 coding upstream 144987 21913998 ~ 21920806 (+)
btr01 LOC107676126,LOC107551815,LOC107746733,LOC107720311,LOC107692198,LOC107603009 coding upstream 152213 21908146 ~ 21913580 (+)
dnaja1 dnaja1,LOC107746728,LOC107603013,LOC107676129,LOC107720316,LOC107551804,LOC108431796,LOC108260608,LOC106591825 coding upstream 175623 21884766 ~ 21890170 (+)
trnak-uuu NA coding upstream 181285 21884436 ~ 21884508 (+)
LOC122341576 LOC107747335 coding upstream 358283 21696521 ~ 21707510 (+)
evi5l evi5l,LOC107676895,LOC107718810,LOC107692153,LOC108428244 coding downstream 5468 22073396 ~ 22111351 (+)
emp1 LOC107676894,LOC107712235,LOC107551885,LOC107718756,LOC107692152,LOC107603024 coding downstream 56582 22124510 ~ 22128348 (+)
si:ch211-243a20.3 si:ch211-243a20.3,LOC107676841,LOC107712233,LOC105901553 coding downstream 70527 22138455 ~ 22144079 (+)
trappc5 trappc5,LOC107692146,LOC107712234,LOC107676838 coding downstream 225520 22293448 ~ 22295199 (+)
mcoln1a mcoln1a,mcoln1,LOC107561871,LOC107676888,LOC107603030,LOC107718592 coding downstream 228104 22296032 ~ 22309386 (+)
G5132 NA non-coding upstream 23681 22041866 ~ 22042112 (+)
G5112 NA non-coding upstream 114458 21945811 ~ 21951335 (+)
G5111 rps6,LOC107603014,LOC107551827,LOC107676127,LOC107720314 non-coding upstream 160684 21899050 ~ 21905109 (+)
G5118 dtx4,LOC107746726,LOC107676128,LOC107692161,LOC107603012 non-coding upstream 194084 21869900 ~ 21871709 (+)
G5098 NA non-coding upstream 321580 21743865 ~ 21744213 (+)
G5134 ddx39aa,LOC107712218,LOC107676896,LOC107603018,LOC107692155,LOC107551870 non-coding downstream 139 22068067 ~ 22070134 (+)
G5159 NA non-coding downstream 164419 22232347 ~ 22235529 (+)
G5178 NA non-coding downstream 317338 22385266 ~ 22387528 (+)
LOC122350977 NA non-coding downstream 458194 22526122 ~ 22530488 (+)
G5206 NA non-coding downstream 471342 22539270 ~ 22539472 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other upstream 430741 21632215 ~ 21635052 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other upstream 445201 21590877 ~ 21620592 (+)
LOC122348864 ctnna2,LOC107706127 other upstream 704353 21321462 ~ 21361440 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other upstream 1822444 20241818 ~ 20243349 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other upstream 1919937 20142461 ~ 20145856 (+)
LOC122348949 LOC107676845,LOC107560973,LOC107718848,LOC107692180,LOC107603005,LOC107746297,LOC107735984 other downstream 772760 22840688 ~ 22851393 (+)
G5559 epc1a,LOC107568137,LOC107654560,LOC107753261,LOC107653121,LOC107582192,LOC107706605 other downstream 1475136 23543064 ~ 23554625 (+)
G5649 LOC107676039,LOC107729348,LOC107594453,LOC107578077,LOC107729349,LOC107676194,LOC107706808 other downstream 2215554 24283482 ~ 24293329 (+)
hadh hadh,LOC107594428,LOC107729339 other downstream 2488869 24556797 ~ 24558929 (+)
G5817 NA other downstream 2635920 24703848 ~ 24704319 (+)

Expression


Co-expression Network