LOC122352793 (LOC107659743,LOC107707706,LOC107659746,LOC107703749,LOC107573693,LOC107574523,LOC107576205,LOC107574524)


Basic Information

Item Value
gene id LOC122352793
gene name LOC107659743,LOC107707706,LOC107659746,LOC107703749,LOC107573693,LOC107574523,LOC107576205,LOC107574524
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28028150 ~ 28034318 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250448.1
TCACTGGTCATGAGTATTGGTGAAAAGGGTATTGCAATGCTGATGTCGCTCAGAATGGCTCTTTGTCTTCCTCTGACCTTTCTGCTGATGATTCACAgtgtaTCTAGCGCTGATTGGGATGTAAGTTACAGTCCATCACACATCTGTGCACTAAAACACTCATCAGTGATAATGAGATGCACTTATACATACCCTCCTGAACATCAGATAGAGGAAGTGTTCTGGACCAAAAACCCTGTAAAGGGTGTAGAGCCTCCAGATCTGTCTGAGGACCCTGAATACAGACAGAGGCTTCAGTATCTGGGAGATAAACAGAAGAACTGCACCATGAGACTgagtcatgtgacacagaaagaTGAACACAAGTACTATTTCAGATTCATCACTAATAAACATGATGGAAAATGGATTGGTCATCCAGGAGTGACTCTTACTGTTTTAGaTCTTCAGGTGGAGTCTcctgagagagtgacagagggAGATTCAGTCCGTCTGACATGTAAAAGCAGCTGCGCTCTGACTGACAGAGCAACATTCATCTGGTACAGAAACTCACAGCCATTAActgagagaagagacagaaacaatataCTCCTGCTGCAGTCAGTCAGAAGAGAGGATGCAGGCAGATATAGCTGTGCTCTACAGGAACACACTTACATCTCTCCTGAGGTTTATCTCAATGTCGTGTatCCACCAAAGAGAGTCTCAGTGTCCATCATTCCATCTGAAATagtggagggagattcagtgactctgatctgcagcagtgattcaaacccacctgcagaAATCAGCTGGATTAAAGGAGGAACAACTGTAGGATCTGGAAGAATCTACAGCATCTCAAAGATCAGATCTGATCACAGTGGAGAATACAAGTGCAAGTCCAGAAATGAACATGGAGAGAAAGACTCTGAAGCTGTGACTTTAAACGTCATGTACCCTCCAAAGAGCGTCTCAGTGTCCATCAGTCCATCTGAAATAGTGGAAggagattcagtgactctgatctgcagcagtgattcAAACCCACCAGCAGAAATCAGCTGGATTAAAGAAGAAATGTTTGTAGGATCTGGAAGAATCTACAACATCTCAAAGATCAGATCTGATCACAGAGAAGAATACAAGTGCAAGTCCAGAAATGAACATGGAGAGAAATACTCTGAAGCTGTGACTTTAAACATCATGTACCCTCCCAGGAACGTCTCAGTGTTCATGAATGGATCTGGTGAAATagtggagggagattcagtgactctgatctgcagcagtgattcaaacccacctgcTCTGAACTTCTTCTGGTTTAAGGAGAATCAAAGCTCATCTGTTGGATCTGGACAGAGTTTCAGTGCACTACAGAGTGGACGCTTCTACTGTGAGGCTCACAATCAACACGGATCTCAGAGATCAGATGCTGTTACTGTCACTGTTAAAGGTCGTCTGGTGATATTGTACATTTCCATTGGAGTGGTTTGTGGAGCTGTAGTTATCATCATAACAGCACTGATTTGGAAAAgctgggagaaaaaaagaacagataAACTTGAAACTCAGATGAATCTTTCTAGACTTGACGATGACAGTTTTGAAGTATCTGATGTTGAGATGACTGAACATTTGTATGGGAATGTAATGACGAATCATTCAAGACCTTGTGATGACAGACTGAAAGATTATGATGCAGAGTCGACTGAACCAGTGTAtgagaatataaattttgaCAGGCCGTAGTGTTTGGGACATGTGTCAAAACATTTTGCAGCCTTTTTCTGTCTCTATTGGTGGAGCAAATTAATTTAGCAGTTGGTTTTGAGTGACTTATAAATCATGAGCCTTAAAGGTGCAGTAATTTTCTTTGCCTGTACAAAAGCatacaaattaatatgaaaacaatctttgtttataacaaacaaaactacatctataaactaaaataatcatGTCAGTCTCCTTGAATATGAAGTTATACATATTTATCGCCTATTCAGtgtatttaaagatattttatattatattaaattcatgCTTAT
>XM_043250458.1
GGTCATGAGTATTGGTGAAAAGGGTATTGCAATGCTGATGTCGCTCAGAATGGCTCTTTGTCTTCCTCTGACCTTTCTGCTGATGATTCACAgtgtaTCTAGCGCTGATTGGGATGTAAGTTACAGTCCATCACACATCTGTGCACTAAAACACTCATCAGTGATAATGAGATGCACTTATACATACCCTCCTGAACATCAGATAGAGGAAGTGTTCTGGACCAAAAACCCTGTAAAGGGTGTAGAGCCTCCAGATCTGTCTGAGGACCCTGAATACAGACAGAGGCTTCAGTATCTGGGAGATAAACAGAAGAACTGCACCATGAGACTgagtcatgtgacacagaaagaTGAACACAAGTACTATTTCAGATTCATCACTAATAAACATGATGGAAAATGGATTGGTCATCCAGGAGTGACTCTTACTGTTTTAGaTCTTCAGGTGGAGTCTcctgagagagtgacagagggAGATTCAGTCCGTCTGACATGTAAAAGCAGCTGCGCTCTGACTGACAGAGCAACATTCATCTGGTACAGAAACTCACAGCCATTAActgagagaagagacagaaacaatataCTCCTGCTGCAGTCAGTCAGAAGAGAGGATGCAGGCAGATATAGCTGTGCTCTACAGGAACACACTTACATCTCTCCTGAGGTTTATCTCAATGTCGTGTatCCACCAAAGAGAGTCTCAGTGTCCATCATTCCATCTGAAATagtggagggagattcagtgactctgatctgcagcagtgattcaaacccacctgcagaAATCAGCTGGATTAAAGGAGGAACAACTGTAGGATCTGGAAGAATCTACAGCATCTCAAAGATCAGATCTGATCACAGTGGAGAATACAAGTGCAAGTCCAGAAATGAACATGGAGAGAAAGACTCTGAAGCTGTGACTTTAAACGTCATGTACCCTCCCAGGAACGTCTCAGTGTTCATGAATGGATCTGGTGAAATagtggagggagattcagtgactctgatctgcagcagtgattcaaacccacctgcTCTGAACTTCTTCTGGTTTAAGGAGAATCAAAGCTCATCTGTTGGATCTGGACAGAGTTTCAGTGCACTACAGAGTGGACGCTTCTACTGTGAGGCTCACAATCAACACGGATCTCAGAGATCAGATGCTGTTACTGTCACTGTTAAAGGTCGTCTGGTGATATTGTACATTTCCATTGGAGTGGTTTGTGGAGCTGTAGTTATCATCATAACAGCACTGATTTGGAAAAgctgggagaaaaaaagaacagataAACTTGAAACTCAGATGAATCTTTCTAGACTTGACGATGACAGTTTTGAAGTATCTGATGTTGAGATGACTGAACATTTGTATGGGAATGTAATGACGAATCATTCAAGACCTTGTGATGACAGACTGAAAGATTATGATGCAGAGTCGACTGAACCAGTGTAtgagaatataaattttgaCAGGCCGTAGTGTTTGGGACATGTGTCAAAACATTTTGCAGCCTTTTTCTGTCTCTATTGGTGGAGCAAATTAATTTAGCAGTTGGTTTTGAGTGACTTATAAATCATGAGCCTTAAAGGTGCAGTAATTTTCTTTGCCTGTACAAAAGCatacaaattaatatgaaaacaatctttgtttataacaaacaaaactacatctataaactaaaataatcatGTCAGTCTCCTTGAATATGAAGTTATACATATTTATCGCCTATTCAGtgtatttaaagatattttatattatattaaattcatgCTTAT

Function

NR:

description
PREDICTED: B-cell receptor CD22-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250448.1 True 2039 mRNA 0.41 12 28028150 28034318
XM_043250458.1 False 1782 mRNA 0.41 11 28028150 28034313

Neighbor

gene id symbol gene type direction distance location
LOC122349305 LOC107758473 coding downstream 1333 27999354 ~ 28026817 (-)
LOC122352890 NA coding downstream 30508 27996411 ~ 27997642 (-)
LOC122352779 LOC107574524,LOC107574523,LOC107576205 coding downstream 41935 27978678 ~ 27986215 (-)
LOC122352989 NA coding downstream 49329 27975280 ~ 27978821 (-)
LOC122349282 NA coding downstream 85881 27940743 ~ 27942269 (-)
LOC122353000 NA coding upstream 9500 28043818 ~ 28045173 (-)
LOC122349314 LOC107571875,LOC107575339 coding upstream 10851 28045169 ~ 28046911 (-)
LOC122349325 LOC107576205,LOC107713396 coding upstream 15767 28050085 ~ 28052500 (-)
LOC122352802 LOC107739960,LOC107707702,LOC107683702,LOC107575281 coding upstream 22788 28057106 ~ 28062090 (-)
LOC122347290 NA coding upstream 152405 28186723 ~ 28187938 (-)
G7138 NA non-coding downstream 17903 27843678 ~ 28010247 (-)
G7125 NA non-coding downstream 26671 27781113 ~ 28001479 (-)
G7128 NA non-coding downstream 55940 27790801 ~ 27972210 (-)
G7127 NA non-coding downstream 56651 27924414 ~ 27971499 (-)
G7157 NA non-coding downstream 63516 27961915 ~ 27964634 (-)
G7182 NA non-coding upstream 75364 28109682 ~ 28114927 (-)
G7238 NA non-coding upstream 204538 28238856 ~ 28239695 (-)
G7480 LOC107724128,LOC107574374,LOC107571134,LOC107742984,LOC107717634,LOC107574376 non-coding upstream 230079 28264397 ~ 28285334 (-)
G7491 NA non-coding upstream 274586 28308904 ~ 28803891 (-)
G7492 NA non-coding upstream 276806 28311124 ~ 28747639 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other downstream 88698 27754782 ~ 27939452 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other downstream 643071 27375317 ~ 27385079 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other downstream 773083 27240324 ~ 27255067 (-)
LOC122344379 NA other downstream 825522 27196238 ~ 27202628 (-)
LOC122349164 NA other downstream 1035568 26984544 ~ 26992582 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other upstream 186581 28220899 ~ 28223247 (-)
G7475 NA other upstream 209810 28244128 ~ 28248523 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other upstream 356721 28391039 ~ 28392053 (-)
G7515 slc27a1b,slc27a1,LOC107662711,LOC107560569,LOC107739969,LOC108413363 other upstream 371864 28406182 ~ 28446591 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other upstream 489387 28523705 ~ 28525551 (-)

Expression


Co-expression Network