LOC122352815


Basic Information

Item Value
gene id LOC122352815
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 27794470 ~ 27803049 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250498.1
ggagagggaagtctgggcatccctgcttagactgttgcccccgcgacccggccccggataagcggaagaaaaagaagaagaagaagaagaagaagaagggtTTGTATGAAATTTGGCATGTTTTGTCTAGAGCAACTTCTGGCAACAAGAAGTAGGCGGAAATTTTCATGATTTCATCATTTCCATGAGCTGCCTGCTGTGAGCAGTATATGCAATATCTTGTTATATTTAACCTGATTGAGTAAATAAGGATGTCTTTCAAGCCGCACAGATCCTTGCAGACgtatttctgtttaaatgatGCATATGACTAATCCATTGTTGCTtggaataaattataattttagaacTTTCAGGCCTATCTCTGTTATTCAAGTATATAAATAGCACTGGTGTTGGTTGGTTGGTACTTCATGTTCAGTGATGTTTAGTGTGAGTGACTGTATGTCTCACTATAACTTCTGCCATCCTCTCTCTGCTCTGATGTGGACACGTAAATGCATTGAATAACTggctaaaaatatgttttatagcTAAACGTCTTGATTGATCTTATATGTAGATATtgcacatacatgtatacgTGCCACAAGAAACACCCTCACAGCcactgttgtattttttttactattacttATGTCACTGCAATTAATCACTAGAAGctaaaagaaggggaaatgacGTGGTAATGACATCATTCTGGTTATAAACCTTCCTTATTTTTCTTCATGTCTCATTTGGTGTCAACTGATGAGCTGTCCTCTGCTACGATATCAGTCAGAATGGCtcttcttttcttcattttttctgtcatgatttacGGGGTTTCTAGTGATAGTGATTTTGAAGTGGAGTACTCTTCTTCACACATTTGTGCACTAATGAACTCATCAGTGacaataaaatgcacttatcAAAAGCCTGATAGACATCTGATTTGGAAAACATTCTGGACCAAAGGACCTATAATAAAGAATGCAGAGCCTCCAGATCTGTCTGAAGACCCTGAATACAGTCAGAGATTTAAGTATCTGGGAGATAAAAAGAAGAACTGCACCATGAGACTgagtcatgtgacacagaaagaTTCACACAAGTACTATTTCAGATTCATCACTGATAAACCTGGTGGAAAATGGATTGGTCGTTCAGGAGTGACTCTTACTGTGACAGaTCTTCAGGTGGAGTCTcctgagagagtgacagagggAGATTCAGTCCGTCTGACATGTAAAAGCAGCTGCGCTCTGACTGACAGAGCAACATTCATCTGGTACAGAAACTCACAGCCATTAActgagagaagagacagaaacagactCCTGCTGCAGTCAGTCAGAAGAGAGGATGCAGGCAGATATAGCTGTGCTGTACAAGAACGCAATCACTATCTCAGATCACCTGATGTTCAGCTTAATGTCACATaCCCACCAAGGATCGTCTCAGTGTCCATCAGTCCATCTGAAATagtggagggagattcagtgactctgatctgcagcagtgattcaaacccacctgcagaAATCAGCTGGATTAAAGGAGGAACAACTGTAGGATCTGGAAGAATCTACAACATCTCAAAGATCAGATCTGATCACAGTGGAGAATACAAGTGCAGGTCCAGAAATGAACATGGAGAGAAATACTCTGAAGCTGTGACTTTAAACGTCATGTACCCTCCCAGGAACGTCTCAGTGTTCATGAATGGATCTGGTGAAGTAGTGGAGGAagattcagtgactctgatctgcagcagtgattcaaacccacctgcTCTGAACTTCTTCTGGTTTAAGGAGAATCAAAGCTCATCTGTTGGATCTGGACAGAGTTTCAGTGCACTACAGAGTGGACGCTTCTACTGTGAGGCTCACAATCAACACGGATCTCAGAGATCAGACGCTGTTTCTGTCACTGTTAAAGAAAGAGGTAAAGCAGTCCTGTACGCAGCTGTAGCGTTCGCAACCGGATGTGGAGTTTTACTCCTTATCTTCATCCTAGTGCTCGCAAGGAAGGCAAAGGGCTCTTCTTCAGACGTCAGACAGAAGCAGGTTCAACAAGCTTCCAGCTCTGAAGATGACGGGCTGTATGACAGAGTTACTCCCAACACACCCCGAGCAGATCCCGCTGCGGGACAGGCTACAAATATAACGTACTCAACCGTCCAACATGTcgcaaaaattaaaaccatctACGAGAATATTAGAGTGCACCATACTGACTCTGCTGCGAGATCCGATACGATGGAGGGTACCTCAGTGGTTTACAGCAGAGCCAAGTGATCCAGGACCCTTCGCGGGGATTGAAAATGACGCTGGGCTCCAGCTGAGTGTAAATATATAGTAGCTGCAGCTTTGAATCAGATGTTTCTATGTGTGTCGAGACGTTTCTCCCTGTCAGTCGTTGAACAGGAAGCACTGATCAGACGCATTGGTACAGCGTGGTGGTTATTTACATCATTGCTTTGAGACTGTGGTTTGTGATTTGAGAAGTTATCATCCACCGCTAGCCGTATGCATACGCCTGTGgacacattttctgttttgtaacGTTTCCGAAGTTTTGCGTAATTTTCCATAAATAGAAGTTTGTTTTAGCCTACACGTCttattcactctttttttttcatgattcatAAAACAATGTTTGATGTTTTGACATCGAATAAATTCATGCATGTTTAAAGTACTGgtctattttatgttttaaataaagtttatatttGTACGTTTTTGGCGATGTTCTATTAA

Function

GO: NA

KEGG:

id description
ko05140 Leishmaniasis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250498.1 True 2753 mRNA 0.42 10 27794470 27803049

Neighbor

gene id symbol gene type direction distance location
LOC122352823 NA coding downstream 29464 27759218 ~ 27765006 (-)
si:dkey-27j5.5 si:dkey-27j5.5,LOC107707713,LOC107659763,LOC107571882 coding downstream 67568 27724178 ~ 27726902 (-)
gcgrb gcgrb,LOC107747136,LOC107572112,LOC107698219,LOC107712052,LOC107569281 coding downstream 160696 27604178 ~ 27633774 (-)
LOC122344130 NA coding downstream 352708 27438436 ~ 27441762 (-)
LOC122344204 NA coding downstream 356191 27431730 ~ 27438279 (-)
LOC122349272 NA coding upstream 84770 27887819 ~ 27890576 (-)
LOC122349282 NA coding upstream 137694 27940743 ~ 27942269 (-)
LOC122352989 NA coding upstream 172231 27975280 ~ 27978821 (-)
LOC122352779 LOC107574524,LOC107574523,LOC107576205 coding upstream 175629 27978678 ~ 27986215 (-)
LOC122352890 NA coding upstream 193362 27996411 ~ 27997642 (-)
G7106 NA non-coding downstream 49175 27736578 ~ 27745295 (-)
G7014 NA non-coding downstream 146184 27647927 ~ 27648286 (-)
G7012 NA non-coding downstream 147745 27646023 ~ 27646725 (-)
G7010 NA non-coding downstream 198626 27593721 ~ 27595844 (-)
G7009 NA non-coding downstream 202020 27591373 ~ 27592450 (-)
G7138 NA non-coding upstream 40629 27843678 ~ 28010247 (-)
G7139 LOC107737592,LOC107703675,LOC107758473,LOC107575341,LOC107574264 non-coding upstream 44666 27847715 ~ 27848178 (-)
G7127 NA non-coding upstream 121365 27924414 ~ 27971499 (-)
G7156 NA non-coding upstream 153776 27956825 ~ 27957999 (-)
G7157 NA non-coding upstream 158866 27961915 ~ 27964634 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other downstream 409391 27375317 ~ 27385079 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other downstream 539403 27240324 ~ 27255067 (-)
LOC122344379 NA other downstream 591842 27196238 ~ 27202628 (-)
LOC122349164 NA other downstream 801888 26984544 ~ 26992582 (-)
si:ch211-286b5.5 NA other downstream 874436 26917669 ~ 26920034 (-)
LOC122349330 LOC107571875,LOC107574524,LOC107703776,LOC107573813,LOC107707718,LOC107732931,LOC107703675,LOC107703672 other upstream 88852 27891901 ~ 28076645 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other upstream 417850 28220899 ~ 28223247 (-)
G7475 NA other upstream 441079 28244128 ~ 28248523 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other upstream 587990 28391039 ~ 28392053 (-)
G7515 slc27a1b,slc27a1,LOC107662711,LOC107560569,LOC107739969,LOC108413363 other upstream 603133 28406182 ~ 28446591 (-)

Expression


Co-expression Network