CI01000000_10448446_10452941


Basic Information

Item Value
gene id CI01000000_10448446_10452941
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 10448272 ~ 10452941 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000000_10448446_10452941.mRNA
GTGATGGTGAACTCTGAGAAAGACCGTGCTTCTCTCTTGTGCATGAAGGCTCTGGCCAACAGGGGGCGTCTGGACACGGTGTCTCAGCAGATGGCCTCTCACCCACAGTACCTGGAGAGTTTCCTGCGCACACAGCACTATATCCTCTATATGGATGGCCCATTGCCTCTGCCCTACCGCCACTACATTGCCATCATGGCTGCAGCACGGCATCACTGTGGGTACCTGGTGTCTTTGCACTCAGCCCAGTTTCTGCGTGTGGGCGGAGACCCGTTATGGCTTCAGGGGCTGGAGGCTGCACCCCCACGTCTACGGCACCTTGACCACATCAGCAAGGTCCTGGCCCATCAGCCTTGGCTCACGGCACGCTCGCACATACAGGCTCTGCTCAAGACGGGAGATCAGTGCTGGTCTCTGGCTGAGCTTGTTCAAGCGGTGGTTCTGCTGGCCCACTGTCACTCCCTTTGCAGTTTTATTTTTGGTTCTGGTTCTGACTCGGATGCCACTCCCATTCCCAGAGTGCATCACGGCACGCCCCCTGGCTACTGTCTTTGTGATGCTGCCAACGGCAACACAGCCTTATCACCACCCCCTGCTGGACCCACAGAGAAGGCACCACGAAGAAGGTCCCTAGACTCCAGCTGCGAAGTTGCGTGCCTTCTAGAACAAATTCAGAAATCACAGGAGGAAATCAAAGAAAGAAAAGGAGACCGACTCTATTCACAGACACTCCTACATGCTGATGTGGAGGAGGAGGAGGAGGCGATGTTCTCCGCAGACCCCTCCCGCTTCGTCACAGATCCAGAATTCGGCTACCAGGAATTTGCCAGACGGGAGGAGGACCATTTCCAAGTATTCCGGGTGCAGGACTATTCATGGGAGGATCATGGTTTTTCGTTGGTAAACAGGCTCTACTCTGATATAGGGCACTTGTTAGACGAGCGATTCCGCAATGTGGCCTCCCTCCCTTTCCCTCACAGCCCCGATCTCAAACGAGCCATCTGGAACTATATTCATTGTATCTATGGAATTAGATATGATGATTACGATTATGGGGAAGTTAACCGTTTACTGGAGCGTGGACTGAAACTTTACATTAAAGCTGTGGCCTGCTACCCCGACTCCAGCAAGACCCCTCTATGCCCACTGTCCTGGGCCCCTGTCAAAGCTTCAGAGAAGGTTCATGTAAATCTGTTAGTGATGGAGGCCCGCCTGCAGGCTGAGTTGCTGTATGCGCTCAGAGCCATCACCCAATACATGATCGCATAGGACACGAGCATTCAGAACCACAGAGGCACATGGTAGAACGGAAATCAAGGCAAAGAAATACAAGCAGAGTCTGTCTCTCCGTCTCTGTATTTGTTGTCTCCGAGTTGACCGGTGTGACGTAAGGTACTGCTGTGAAAAGTTTCTTTGCCAAAGGTGAAACTTTAGAAGAAAAAA

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component

KEGG:

id description
K10141 SESN1_3; sestrin 1/3

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000000_10448446_10452941.mRNA True 1443 mRNA 0.53 7 10448272 10452941

Neighbor

gene id symbol gene type direction distance location
CI01000000_10431043_10433001 NA coding downstream 15073 10431034 ~ 10433199 (-)
CI01000000_10417521_10426279 SLC7A3B, SLC7A3 coding downstream 21993 10417402 ~ 10426279 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 coding downstream 38322 10407395 ~ 10409950 (-)
CI01000000_10373343_10374473 NA coding downstream 73786 10372427 ~ 10374486 (-)
CI01000000_10333352_10335572 FOSL1A coding downstream 112700 10331605 ~ 10335572 (-)
CI01000000_10465427_10467327 NA coding upstream 12262 10465203 ~ 10467327 (-)
CI01000000_10468528_10473166 NA coding upstream 14611 10467552 ~ 10473166 (-)
CI01000000_10474520_10476010 NA coding upstream 21470 10474411 ~ 10476010 (-)
CI01000000_10481263_10483211 RAP2A.S, RAP2C, RAP2A, RAP2AB coding upstream 28148 10481089 ~ 10483594 (-)
CI01000000_10504203_10520863 MBNL3 coding upstream 51262 10504203 ~ 10520863 (-)
G8028 NA non-coding downstream 13986 10434021 ~ 10434286 (-)
G7946 NA non-coding downstream 77125 10369020 ~ 10371147 (-)
G8016 NA non-coding downstream 102776 10344942 ~ 10345496 (-)
G7924 NA non-coding downstream 225998 10221012 ~ 10222274 (-)
G7884 NA non-coding downstream 299192 10147499 ~ 10149080 (-)
G7968 NA non-coding upstream 132656 10585597 ~ 10589211 (-)
G7991 NA non-coding upstream 251958 10704899 ~ 10719278 (-)
G7985 NA non-coding upstream 319486 10772427 ~ 10774179 (-)
G7996 NA non-coding upstream 342419 10795360 ~ 10796229 (-)
G8080 NA non-coding upstream 463069 10916010 ~ 10916315 (-)
G3931 NA other downstream 4044747 6157013 ~ 6403525 (-)
G3716 NA other downstream 4447503 6000407 ~ 6000769 (-)
G3650 NA other downstream 4907391 5540463 ~ 5540881 (-)
CI01000000_05465020_05466303 NA other downstream 4981756 5464058 ~ 5466516 (-)
CI01000000_10824957_10825464 MMGT1, TMM32 other upstream 371470 10824324 ~ 10825464 (-)
G8125 NA other upstream 587328 11040269 ~ 11040909 (-)
G8699 NA other upstream 2832383 13272585 ~ 13311429 (-)
G9036 NA other upstream 3273859 13726800 ~ 13727090 (-)
G9602 NA other upstream 3888061 14341002 ~ 14346534 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location