LOC122353000


Basic Information

Item Value
gene id LOC122353000
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 28043818 ~ 28045173 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043250829.1
CCTGAGGTTTATCTCAATGTCATGTATCCTCCTCAGCACACTTTTGTATCAGTGAGTCCATGCTGTGAAATagtggagggagattcagtgactctgatctgcagcagtgattcaaacccacctgcagaAATCAGCTGGATTAAAGGAGGATCAACTGTAGGATCTGGAAGAATCTACAACATCTCAAAGATCAGATCTGATCACAGTGAAGAATACAAGTGCAAGTCCAGAAATAAACATGGAGAGAAATACTCTGAAGCTGTGACTTTAAACATCAAGTttgtaGGATGTCAGGTGATATTATACATATCTGTTGGAGTGGTTTGTGGAGCTGCAGCTGTTATCACGATGGTGCTTATGATTTGgcGAAGCAGGGTGAAAAAGAGAAAGGACACCCAGGATGTTGTGTTGGCTGAATctgtatatgaaaatgtaacgGCGAAACCGTAGTACTTGGGATGCGGAGCCCTGAATGATTGACAGCAGTCCCACGAtttccatttattcatttattcattctgcagcagttttttttcatgtaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043250829.1 True 543 mRNA 0.42 5 28043818 28045173

Neighbor

gene id symbol gene type direction distance location
LOC122352793 LOC107659743,LOC107707706,LOC107659746,LOC107703749,LOC107573693,LOC107574523,LOC107576205,LOC107574524 coding downstream 9500 28028150 ~ 28034318 (-)
LOC122349305 LOC107758473 coding downstream 17001 27999354 ~ 28026817 (-)
LOC122352890 NA coding downstream 46176 27996411 ~ 27997642 (-)
LOC122352779 LOC107574524,LOC107574523,LOC107576205 coding downstream 57603 27978678 ~ 27986215 (-)
LOC122352989 NA coding downstream 64997 27975280 ~ 27978821 (-)
LOC122349325 LOC107576205,LOC107713396 coding upstream 4912 28050085 ~ 28052500 (-)
LOC122352802 LOC107739960,LOC107707702,LOC107683702,LOC107575281 coding upstream 11933 28057106 ~ 28062090 (-)
LOC122347290 NA coding upstream 141550 28186723 ~ 28187938 (-)
LOC122347302 NA coding upstream 146533 28191706 ~ 28192763 (-)
LOC122350202 NA coding upstream 173109 28218282 ~ 28220347 (-)
G7138 NA non-coding downstream 33571 27843678 ~ 28010247 (-)
G7125 NA non-coding downstream 42339 27781113 ~ 28001479 (-)
G7128 NA non-coding downstream 71608 27790801 ~ 27972210 (-)
G7127 NA non-coding downstream 72319 27924414 ~ 27971499 (-)
G7157 NA non-coding downstream 79184 27961915 ~ 27964634 (-)
G7182 NA non-coding upstream 64509 28109682 ~ 28114927 (-)
G7238 NA non-coding upstream 193683 28238856 ~ 28239695 (-)
G7480 LOC107724128,LOC107574374,LOC107571134,LOC107742984,LOC107717634,LOC107574376 non-coding upstream 219224 28264397 ~ 28285334 (-)
G7491 NA non-coding upstream 263731 28308904 ~ 28803891 (-)
G7492 NA non-coding upstream 265951 28311124 ~ 28747639 (-)
G7105 epn3,epn3b,LOC107707724,LOC107571871,LOC107703747,LOC107745640,LOC107574648,LOC108411852 other downstream 104366 27754782 ~ 27939452 (-)
LOC122344630 LOC107578363,LOC107571875,LOC107575964,LOC107575480,LOC107571874,LOC107574523,LOC107576205 other downstream 658739 27375317 ~ 27385079 (-)
LOC122343833 LOC107749248,LOC107594233,LOC107703686 other downstream 788751 27240324 ~ 27255067 (-)
LOC122344379 NA other downstream 841190 27196238 ~ 27202628 (-)
LOC122349164 NA other downstream 1051236 26984544 ~ 26992582 (-)
nxnl1 nxnl1,LOC107748002,LOC107713785,LOC107571423,LOC107659782,LOC107690637 other upstream 175726 28220899 ~ 28223247 (-)
G7475 NA other upstream 198955 28244128 ~ 28248523 (-)
G7508 LOC107739967,LOC107747700,LOC107716241,LOC107572978 other upstream 345866 28391039 ~ 28392053 (-)
G7515 slc27a1b,slc27a1,LOC107662711,LOC107560569,LOC107739969,LOC108413363 other upstream 361009 28406182 ~ 28446591 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other upstream 478532 28523705 ~ 28525551 (-)

Expression


Co-expression Network