CI01000000_10468528_10473166



Basic Information


Item Value
gene id CI01000000_10468528_10473166
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000000
NCBI id null
chromosome length 19091038
location 10467552 ~ 10473166 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000000_10468528_10473166.mRNA
GTGTGCAGTGTAAGATCATCAACCTCGAGTATGTGAAGTGCATCTGGAACCCAAACACATCAACAATGAACTACACCTTCAGCAGTAAATTTGCAAACGACGACTCCCACGACTGTCAAGAATACATCTTGGAGCACAATTACGCTGTAGGCTGCAAAATTCCTCTCAAAAACCATGATCAGAAGTTTTCAAAATTTCAAATATCTGTGTCCACTGAAGGAAACCACACTTTTGAAAAATCTTTTCATTCCCTCAAGAGCCTTGTGCAGCTAAAAGCACCCTATAACCTCTCAGTGAAGTGGAATGAGCACAACAGCACACTTTTACTACAGTGGAACAGCAGTACCACCCTCAAAGATAACTGTGTAGTCTATAATGTGCGCAACCAGAAAGACGAAACCCAGTTGTCAGCAAATGTGACAAAAAAGTCATACAGTCTGACGCAGGTCTCACAGAACAAGCACTATGTTTTCCAAGTCCGGAGCACTGTCTCTGGTCTCTGTGGTTCTTCAGATTTATGGAGTGACTGGAGCCCTCCAGTGGAGTGGGGCAGTGCAGAGAACATCAGCAGACAAGGCTGGTCGCAGTGGTTGTATGGTTTTCTGTCAGTACTTATGCTGTTCTTGCTGGGTTTGTTGTTGTGCTATTGTGAGAGACTTGGATGTACTGTAACCCTCTCACTTTATTCTCAGAGCTGGGTTCACATCTCCAGAGAGCTGAAGGATGCCTTTGAGCCAGACTACACAGAGCCGTCCTGCGATGTGTGTGAGGTTACGCCCTCTTGTGAAGCCGATCCCACACCTGTGGCCAGTCCTGCTCCTCAAACTGACAAGTGTGATGAACCAAGCGCTGCAGAAGAGCAGAGCTCATAAGACGAAGAGGTGTTAACCTTTCACCTGAACTGTCATCTCATTCTTACTGTACATGTTCACAAGCGACATTTCAGTGTCTGTTCTCATTTGCACATTTATCTTTTACAATTGTATGTAGAGTTTAAGTATAAGACAGATGGAAATTTAAATGACTAACATTATCAATACTACAGTGAATCTAATAGTTTGGAGTTGTTACACTGACGAAGGTGGAATTTATTTGATCAAAAATACAGTAAAAACAACAACATTGTGAAATATTATTACAATTTAAAATAATTGTTCTCTATTTGAATATATTTTAAAATCTGATCTAATTCTTGTGATGGCAAAGCTGAATTGTGTCATATGATATTTCAGAAATCATTCTGAAATCGTGCTGATTTAGTGTTGAAAACAATTGTGCTGCTTAATATTTTTAATATTTTATATATATATTAAATATGTTATATTATTAAAAATATTAAATATGTATTTTATAATATTTTTGTGGAAAATGTGATAAATTTTTTCTCATGATTCTTTGTTGAATAGAAAGTTTAAAAGAACATTTATTTGAAATAGAACTTTTGTAACATTATAAATGCCTTTTTTTAAATTGTTTTGATCAATTTAATGCACCTATGTTGAACAGAAGGATTAATTTCTTACTGTACCCAAATTTAAAAACTTAAAAATACATGAATGTCTTTGCATTACAGCATTTAAAGGTATATCAAACCAATGGCATTTAATTTAAAGAAATATAGCACACTTTCAGAAGTGTTTAACTTTTTTGGGGGGGTATTGTTAGGTTTTTAATTCTAAAACAATATACAGTATGTATTGTGTTAAGGCTACAGGTATTTCTACACTTTTTGATGGAGAACTTGAAGTAAACAGACTTCATAAATCCACTAAGAATCACCGTGTGCACATAATATTTAATGAAACTGCCTTTTAAGTTTGGTAACATGTTGAACAGATATGTAATAAA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000000_10468528_10473166.mRNA True 1848 mRNA 0.36 6 10467552 10473166

Neighbor


gene id symbol gene type direction distance location
CI01000000_10465427_10467327 NA coding downstream 225 10465203 ~ 10467327 (-)
CI01000000_10448446_10452941 NA coding downstream 14611 10448272 ~ 10452941 (-)
CI01000000_10431043_10433001 NA coding downstream 34353 10431034 ~ 10433199 (-)
CI01000000_10417521_10426279 SLC7A3B, SLC7A3 coding downstream 41273 10417402 ~ 10426279 (-)
CI01000000_10407402_10409508 UBL3B, UBL3.S, UBL3 coding downstream 57602 10407395 ~ 10409950 (-)
CI01000000_10474520_10476010 NA coding upstream 1245 10474411 ~ 10476010 (-)
CI01000000_10481263_10483211 RAP2A.S, RAP2C, RAP2A, RAP2AB coding upstream 7923 10481089 ~ 10483594 (-)
CI01000000_10504203_10520863 MBNL3 coding upstream 31037 10504203 ~ 10520863 (-)
CI01000000_10533216_10540624 HS6ST2 coding upstream 59968 10533134 ~ 10540968 (-)
CI01000000_10544400_10562125 GPC4 coding upstream 71156 10544322 ~ 10563078 (-)
G8028 NA non-coding downstream 33266 10434021 ~ 10434286 (-)
G7946 NA non-coding downstream 96405 10369020 ~ 10371147 (-)
G8016 NA non-coding downstream 122056 10344942 ~ 10345496 (-)
G7924 NA non-coding downstream 245278 10221012 ~ 10222274 (-)
G7884 NA non-coding downstream 318472 10147499 ~ 10149080 (-)
G7968 NA non-coding upstream 112431 10585597 ~ 10589211 (-)
G7991 NA non-coding upstream 231733 10704899 ~ 10719278 (-)
G7985 NA non-coding upstream 299261 10772427 ~ 10774179 (-)
G7996 NA non-coding upstream 322194 10795360 ~ 10796229 (-)
G8080 NA non-coding upstream 442844 10916010 ~ 10916315 (-)
G3931 NA other downstream 4064027 6157013 ~ 6403525 (-)
G3716 NA other downstream 4466783 6000407 ~ 6000769 (-)
G3650 NA other downstream 4926671 5540463 ~ 5540881 (-)
CI01000000_05465020_05466303 NA other downstream 5001036 5464058 ~ 5466516 (-)
CI01000000_10824957_10825464 MMGT1, TMM32 other upstream 351245 10824324 ~ 10825464 (-)
G8125 NA other upstream 567103 11040269 ~ 11040909 (-)
G8699 NA other upstream 2812158 13272585 ~ 13311429 (-)
G9036 NA other upstream 3253634 13726800 ~ 13727090 (-)
G9602 NA other upstream 3867836 14341002 ~ 14346534 (-)

Expression



Co-expression Network