LOC122353257


Basic Information

Item Value
gene id LOC122353257
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 26313205 ~ 26315689 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251214.1
GCCGCTCTTCTGTCGCTGGAAGCATGCGACGATTGCTGGACAGCAGCTGGATAAAGTTTGGACCTGCTGGAAGAGATGACTGGGTGTCCGGGTCCCCGTTGCCGCCGACCGCAGAACAACGACTACAGGGTTACCACTGGAACGAGCTCTCGAGCGAAAACGACGCAAAATCGGAGCTTATCCTGTACGTCGTCCTCCCGCTCGTCACGCTCGTCGCGTTCGGCGTCGCGTTTGTCCTTCTCTACCGAAGGTTCAGGCAGAGCAAGCTCGGACTGGCCAACATCATCGCGCTGGACCTGCAGGACCCGGAGCGCAACGCAGAGATCCTGTCGTCGCTCACCGGGAACGCAGAGCGGCTCAACAGCTCCAGCTCGGACTTGTCTGACGGGGTTTTCCTCATGGTTTACCTCCCGCCGCCCTACGAGGACACGCTGACGAAGATCACCCGGGCCGCCAGCCTCAGCAGCGGGAAAGACGTCGAGTCCGTCAAGATCGAAGACCTCGAAGCCAAACTGTGTCCAGAACTTAAGTCCAGCAGGGAGTTTGTCTGAGACAGAAGTGCTAAAGAGacaccggggctagttgtcacagaGACACCCACcccccaaaacaaaactgaaccatcaccaaaaaaaaaaatcccttgcAGACATTACAAACCATTACAAATGGTtcctgttgtttgttttgggaCATGTTCCATTAGGATTTAATGGTTTAACAAGCCACCGAAAGAAGGTGTCCCAAGTACCAGTAGACTTACATTACAGTTTCCATTCAAACCAATAGAGCTCTCATTATAaccagtaaaaccattacaaaaccTGTGATGGTGTCTGTCTTTTTTACAGCAGAGGGTGAAAGTGACACAAGGGCTATCTCCGTTTTTCAGAAGTCGTTGCCTGTTGGTTGAATTCTAATCTACAAACTAAACGGAGGAAAAACTTAAAAGTACGTGCCtgactttcaaaaataaacaactgacAACTAGCCTCGGGACCCCTATAGCGAAGACATCGTCTCATTCTGAACTGAACTTTGCAGggatttttttatactgtaacaTAATAAAGCGATACAGAATGAAACATCTTGATGTTCTATATTAGATTTGCATTACAGCGGTGTATTGCGCGCATCGACATGAGAGTAAATCTTTGTGCTCGTATTTATAGGCTAAGTAATCGCCATATACTGCCTAGTTAGACACACTTTGTGTTGTACCACAACTTTTAGTAGAAACAACACCCGTATGATGTCACTTTTTATATCTGCATGACTGCATCAGTCCTGTTTTGGATTTAAATATAAAGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251214.1 True 1316 mRNA 0.48 2 26313205 26315689

Neighbor

gene id symbol gene type direction distance location
akt3b akt3b,LOC107594289,LOC107703832,LOC107729704,LOC101071975,LOC108259077,LOC108438606,LOC101174244 coding downstream 29462 26271910 ~ 26283743 (-)
cct4 cct4,LOC107700877 coding downstream 51590 26256237 ~ 26261615 (-)
fam161a fam161a,LOC107729720,LOC107700804,LOC107594291,LOC107746123,LOC107703833 coding downstream 58462 26248727 ~ 26254743 (-)
xpo1a xpo1a,xpo1,LOC107729732,LOC107703835,LOC107746076,LOC108258411,LOC100380723,LOC106585804 coding downstream 64862 26236200 ~ 26248343 (-)
usp34 usp34,LOC107729952,LOC107746122 coding downstream 78105 26190919 ~ 26235100 (-)
ltv1 ltv1,LOC107746106,LOC107700874,LOC107729687 coding upstream 18924 26334613 ~ 26340257 (-)
capn9 capn9,LOC107729683,LOC107598506,LOC107700872,LOC107746105,LOC107594336,LOC107703830 coding upstream 25035 26340724 ~ 26348496 (-)
taf5l taf5l,LOC107703828,LOC107700873,LOC107580738 coding upstream 32902 26348591 ~ 26354198 (-)
si:ch211-133l11.10 si:ch211-133l11.10,LOC107594285,LOC107746109,LOC107703823 coding upstream 64428 26380117 ~ 26383692 (-)
rfx1b LOC107703707,LOC107746111,LOC107594279,LOC107729889 coding upstream 110982 26426671 ~ 26440524 (-)
G6596 NA non-coding downstream 122695 26189058 ~ 26190510 (-)
G6670 NA non-coding downstream 216948 26092009 ~ 26096257 (-)
G6687 NA non-coding downstream 247019 26064559 ~ 26066186 (-)
G6652 NA non-coding downstream 374354 25938421 ~ 25938851 (-)
G6650 NA non-coding downstream 394420 25918570 ~ 25918785 (-)
G6741 NA non-coding upstream 47983 26363672 ~ 26367603 (-)
G6747 LOC103457336,LOC103359577 non-coding upstream 53261 26368950 ~ 26369519 (-)
G6749 LOC107729639,LOC107598502,LOC107700871,LOC107736507,LOC107703825,LOC107594284 non-coding upstream 57973 26373662 ~ 26374623 (-)
G6769 NA non-coding upstream 129208 26444897 ~ 26446738 (-)
G6799 NA non-coding upstream 196703 26512392 ~ 26512958 (-)
G6592 ucp1,LOC107730009,LOC107598545,LOC107703842,LOC107700810 other downstream 177719 26130788 ~ 26135486 (-)
patl1 patl1,LOC107598520,LOC107657997,LOC107594300,LOC107703847,LOC107746119 other downstream 449418 25831324 ~ 25863787 (-)
LOC122353196 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other downstream 597501 25714102 ~ 25715704 (-)
prokr1a prokr1a,LOC107594458,LOC107676304,LOC107747445,LOC107757000,LOC108441199 other downstream 756223 25547725 ~ 25556982 (-)
G6135 ndufaf5,LOC107675590,LOC107594415 other downstream 910850 25400384 ~ 25402355 (-)
smdt1b LOC107598503,LOC107700869,LOC107594281,LOC107746113,LOC107703822 other upstream 101170 26416859 ~ 26417897 (-)
LOC122353745 slc9a3r2,LOC107729606 other upstream 138561 26454250 ~ 26523402 (-)
c1h19orf53 zgc:136864,c26h19orf53,LOC107598479,LOC107700848,LOC107747197,LOC105901798,LOC106531096 other upstream 486221 26801910 ~ 26802954 (-)
si:ch211-286b5.5 NA other upstream 601980 26917669 ~ 26920034 (-)
LOC122349164 NA other upstream 668855 26984544 ~ 26992582 (-)

Expression


Co-expression Network