naa15b (naa15b,LOC107712022,LOC107737080,LOC107674234,LOC107671368,LOC108434806,LOC108263533)


Basic Information

Item Value
gene id naa15b
gene name naa15b,LOC107712022,LOC107737080,LOC107674234,LOC107671368,LOC108434806,LOC108263533
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 19786710 ~ 19800145 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043251229.1
ATCGGCCATTTTGGGCTCAAAGGGGGCTTTTCTGTCACCACGTGAGGGCTGGGTTAGTTAGTCCGACACGGGCACTAAATCGAGCCGAGCGAGGACTCAGAGAACAAGGGGGTAAAAACCGTGGAAGACGCCGCCGTACACAGCTGCACTCGTTTCTCATGTGctgatagagagagagtgtaaaGGATGCCGACAGTCACTCTGCCTCCCAAAGAAAACGCTCTGTTCAAGAGGATCCTGAGATGTTATGAACACAAGCAGTACAGAAATGGACTGAAATTCTGCAAACAGATTCTCTCCAATCCCAAGTTCTCCGAGCATGGAGAGACGCTGGCGATGAAAGGCCTGACCCTGAACTGCCTTGGGAAGAAAGAAGAAGCCTACGAACTTGTCCGCAGAGGTCTCCGAAATGACCTGAAGAGCCACGTCTGCTGGCATGTGTACGGTTTGCTCCAGAGGTCTGACAAGAAGTATGATGAGGCTATCAAGTGCTACAGAAACGCACTGAAATGGGACAAAGACAACTTGCAGATCCTTCGAGATCTCTCGCTCCTGCAGATCCAGATGAGAGACCTGGAGGGTTACAGGGAGACCCGGTATCAGCTGCTGCAGTTGCGGCCAGCGCAGCGAGCGTCATGGATTGGCTACGCCATTGCATATCACCTCTTAGAGGACTATGAGATGGCTGCCAAAATCATTGAGGAGTTTAGAAAAACACAACAGacgTCCCCTGACAAGGTGGATTATGAGTACAGTGAGCTGCTGCTGTATCAGAATCAGGTCTTGAGGGAGGCGGGACTCTTGAGAGAAGCTCTGGAGCATCTCACCACCTACGAGAAACAGATCTGTGATAAGCTGGCCGTGGAGGAAACCAAAGGGGAGCTGCTGTTGAGTCTGGAACGGTTTGGGGAGGCGGCAGATGTGTACAGACGACTACAGGAGAGAAATCCTGAAAACTGGTCTTACTATCATGGCCTAGAAAAAGCCCTCAAGCCTGcaagtACAGAAGAGAAGCTGAAGATCTATGAGGAGGCCTGGGAGAAGTACCCTAAAGGTCTCGTACCTCGTCGATTACCACTCAGCTTCCTGTCCGGCGATAAGTTTAAGGAGTGTCTGGATAGATATTTAAGAATGAACTTCAGTAAGGGCTGTCCTCCAGTCTTCACCACACTCAGATCTCTCTATCAGGACAAAGAGAAGGTCTCAATAATTGAAGAATTAGTTGTTGGTTTCGAAACGTCATTACGGAGCTGTCGAATGTTCAGCCCAAATGATGATGGCAAAGAGGAGCCTCCTACTACGTTACTCTGGGTGCAGTATTTCCTGGCTCAGCACTATGATCAGATCGGCCAGCACACCATGGCTCTCGATTATATCAACGCTGCCATTGAGAGCACACCTACTCTGATTGAGCTCTTCCTCATTAAAGCCAAGATATACAAGCATGCTGGGAACATCCGGGAAGCAGCTCGTTGGATGGACGAGGCTCAGGCCCTGGACACAGCAGACCGTTTCATTAACTCCAAATGCGCCAAGTACCTGCTTAAAGCAGGCCTTGTCAAGGAGGCTGAGGAAATGTGCGCCAAATTCACAAGGGAGGGAGCATCTGCGGTGGAGAATCTGAATGAGATGCAGTGCATGTGGTTCCAGACTGAATGTGCTCTGGCCTATAAATCCGTGAAGAAATATGGAGAAGCGCTTAAAAAATGCCACGAGATTGAAAGGCACTTTGTAGAGATAACGGATGACCAGTTTGACTTCCATACGTATTGCATGCGGAAGATGACGCTGCGCTCCTATGTGGACCTGCTTAAACTGGAGGATGTGTTGCGTATGCACCCATTCTACTTCAAAGCCTCACAAACCGCCATCCAAATCTACCTCAACCTGCATGACAACCCGCTAACGGATGACAGCAAGGAACTACAGGCTGATACTGGGAACCTGACTGACAAAGAACTGAAGAAGTTAAGGAATAAGCAACGTAGAGCACAGAAGAAAGCACAgctggaggaggaaaaaaagaatgcagagaaagagaaacagttAAAGaaccagaaaaagaaaaaagaagatgaTGACGAAGAGATCGGTGGACCTAAAGAGGAACTTATACCAGAGAAACTCGCcaggGTTGAGAACCCATTAGATGAAGCTGTAAAGTTTTTGACACCCTTGAAAAACCTGGTGAAGAATAAGATTGATACACACCTGCTGGCCTTTGAGATCTACTTTAGGAAAGAGAAGTTTCTGCTAATGCTACAGTCAGTGAAGAGGGCCTATGCAATAGACCCAGACCACCCATGGCTTCACCAGTGTTTAGTGCGCTTCTTTAAAGGAGTGTCCGATAGTAAAAACCTAGCAGTATCGGTCAGCATGGTTCTGAAGCAGGAAATCCCCAGGCTGTTTGGGGAAAGTAATGCTAAGAGCTTCAACCAGGCCTTCCTCACCAAGCACTTCAATTCCATCCCTCATCGAGTAGCAGCTGCCAAAATGATGTTCTGCTTGGATCCTTCAACACAGAAGAAAGCTGTGGAACTTGCTATTGCGCTCGATGAGTCACTGAACAACAGAAACATTCAGaTCTGTACAGATGTTTTGGAAAGCCTGCATGACGGTAGCCTTGGAGAGGCTAAGGAAACCGCTGAGTTATACCGAGCAGAGTGTCATAAGATATACCCCTATACGCTGGCCTTCATGCCCCCAGGCTACGAGGAAAACATGAAGATTGCGGTCAATGGAGATGTCTCCACAGAAACCGAGGAGCTGGCCAATGATATGTGAATATCTGAAGAGGGTGAAAGACTGAAGGAGGAGGTGGAATGGGAAGCGGTGCGGCACCGCCACTGTCAAACACCCGAGACGGTTGCCACTGACTATTGCGATTCTGTGAGGAACTTCCTGCGATCTTCTACACCCCCAGAAATTGCAGTTAGGACTGACAGACAATGACTGTGTTTTGGAgtggaggaagaagaggaggg

Function

symbol description
naa15b Predicted to contribute to peptide alpha-N-acetyltransferase activity. Acts upstream of or within myotome development. Predicted to be part of NatA complex. Predicted to be active in cytoplasm. Is expressed in eye; immature eye; midbrain; optic tectum; and somite. Human ortholog(s) of this gene implicated in autosomal dominant mental retardation 50. Orthologous to human NAA15 (N-alpha-acetyltransferase 15, NatA auxiliary subunit).

NR:

description
PREDICTED: N-alpha-acetyltransferase 15, NatA auxiliary subunit

GO: NA

KEGG:

id description
K20792 NAA15_16; N-alpha-acetyltransferase 15/16, NatA auxiliary subunit

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043251229.1 True 2984 mRNA 0.49 20 19786710 19800145

Neighbor

gene id symbol gene type direction distance location
LOC122353421 LOC107712008,LOC107671479,LOC107552100,LOC107737086,LOC107556535,LOC107674229 coding upstream 123014 19653271 ~ 19663696 (+)
zgc:56493 zgc:56493,LOC107674259,LOC107737089,LOC107559635,LOC107671288,LOC107551115,LOC103040975,LOC108444223 coding upstream 146194 19637305 ~ 19640516 (+)
faah2a faah2a,LOC107551107,LOC107712025,LOC107737091,LOC107559634,LOC107674256,LOC108263609,LOC108434801 coding upstream 151305 19629756 ~ 19635405 (+)
LOC122353518 NA coding upstream 173639 19606622 ~ 19613071 (+)
LOC122348841 LOC107559639,LOC107551053,LOC107552058 coding upstream 183509 19598115 ~ 19603201 (+)
LOC122353562 LOC107671374,LOC107712028,LOC107556515,LOC107674199,LOC797949,LOC107752905 coding downstream 9 19800154 ~ 19803853 (+)
LOC122353552 zgc:194443,LOC107552058,LOC107551053 coding downstream 5748 19805893 ~ 19809040 (+)
htra3a htra3,htra3a,LOC107671567,LOC107674193,LOC107752916,LOC107712020 coding downstream 9972 19810117 ~ 19817661 (+)
gpr78a LOC107712019,LOC107552545,LOC107671586,LOC107556530,LOC107674203,LOC107752934 coding downstream 31840 19831985 ~ 19834951 (+)
cpz cpz,LOC107712018,LOC107752940 coding downstream 36097 19836242 ~ 19845286 (+)
G4579 NA non-coding upstream 8627 19743162 ~ 19778083 (+)
G4553 NA non-coding upstream 211950 19574411 ~ 19574760 (+)
G4531 NA non-coding upstream 261930 19524546 ~ 19524780 (+)
LOC122333031 NA non-coding upstream 609883 18993761 ~ 19176827 (+)
G4361 NA non-coding upstream 1038957 18747234 ~ 18747753 (+)
G4677 dok7,LOC107749932,LOC107674231,LOC107552150,LOC107714234,LOC107679881 non-coding downstream 170631 19970776 ~ 19972265 (+)
G4678 dok7,LOC107714234,LOC107674231,LOC107679881,LOC107749932 non-coding downstream 178824 19978969 ~ 19980622 (+)
G4679 dok7,LOC107552150,LOC107749932,LOC107679881,LOC107674231 non-coding downstream 182659 19982804 ~ 19983127 (+)
G4680 NA non-coding downstream 184580 19984725 ~ 19984981 (+)
G4686 rgs12b,LOC107749922,LOC107679871,LOC107551217 non-coding downstream 199196 19999341 ~ 20000548 (+)
scoca scoca,scoc,LOC107671340,LOC107712029,LOC107674238,LOC107737083,LOC107556533 other upstream 9660 19715553 ~ 19777050 (+)
G4528 ing2,LOC107671086,LOC107550937,LOC107748834,LOC107579959,LOC107737097,LOC107684977 other upstream 264311 19521084 ~ 19522399 (+)
dclk2a LOC107550694,LOC107598728,LOC107742539,LOC107670743,LOC107654992 other upstream 1502066 18247250 ~ 18284644 (+)
lsm6 lsm6 other upstream 1888164 17896535 ~ 17898546 (+)
gab1 gab1,LOC107725185,LOC107734574,LOC107684448 other upstream 2175965 17551473 ~ 17610745 (+)
si:dkey-9i23.14 LOC107679868,LOC107750009,LOC107552619 other downstream 342316 20142461 ~ 20145856 (+)
pold4 si:dkey-28b4.7,pold4,LOC107730517,LOC107746491,LOC107664544,LOC107674245 other downstream 441673 20241818 ~ 20243349 (+)
LOC122348864 ctnna2,LOC107706127 other downstream 1521317 21321462 ~ 21361440 (+)
rnf24 rnf24,LOC107689472,LOC107551705,LOC107567054 other downstream 1790732 21590877 ~ 21620592 (+)
G5037 fbxo41,LOC107567034,LOC107692170,LOC107711519 other downstream 1832070 21632215 ~ 21635052 (+)

Expression


Co-expression Network