LOC122360084 (LOC107740521)


Basic Information

Item Value
gene id LOC122360084
gene name LOC107740521
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29267132 ~ 29272553 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043260445.1
CAGAAATATAGGAAACCAGGAAGATCTGGTGAGAAAAGCTCACACTTTTGGTGTAAAACAATAGAAGCCAGTGGAAAGTCCCCATGAAGGATGATAtcacgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgagtagGAAGGTGCTGAGCTGAAGTGAGgagctttctctttctcttctgttgTGGTCAGAGAagaaatgcatgtttacatGAATAAACCAGAAAGACGCTTTGAGACCGAAGAGAGACCAAGAGCTGATGACCAGCACTGAGACTGAGatGGACGTGAGGATCCCGGTGGAGTCTGAGTCTGAGGTGTGGTCTCTGTCTGAGTCTGAGTTCAGCTGTCACTGCTGCTATGAGGTTCTGGTGGAGCCCACCACACTCACCTGTGGACACAGCTTCTGCAGACACTGTCTGGCCAACTGGTGGGCCTCCGCTCGGCCCCGCGTCCGCACCGACTGCCCAGAATGCCGAGCGCTGTGGGTGGGCTTTCCCAAAGTCAACATCCTGCTCCGggacGCGGTGGAGAAGCTGTTCCCCGCTGACGTGAGCCGCCGGAAGCAGGCCGTCCTGAGCGATCCGTGGCTCTCTCATGTTCTCCAGGTGTTCCAGCAGCAGGAGAGGAGACAGGCCCCTCGCGCAGCTCCGCCACAGAACCCACCGCAGCTTCCTATAATGGACCAGCGGCTGTTTAATGTGTTGAATCAAGTACAGCTTGACATGTTGAATATGCCAGAGTTCAACATCCGAGGGATTTGCTCTGGAATCAGTATAGTGCTGTGCTGCATGGTcgtgttgGTGTTAGTATGGCGTGTGTACAGTGCCAGCTCCAGTCATGAGGTGCTGCTCACTAAACCTCTCAGCAGGTGGAGCGCTGATGATGTCACTCTGTGGGTGGAGCATCTGAGCGTCTGGACCAATCAGTATAAAGAAACCTTCCGCAGGGAGAAGATCAACggcaggttgCTGTTCTCTGTCAGTGACACTGATCTGTCGTCAGCTCCGTTCAACATCAGGAACGAGTCTCACAGACAGATCATCCTCCAGGAGATACACAGACTCAGACAGCGCCGGCTCTCACCCAGCCTCTGGGAGTacaagGACCTGTATTTAGGGAAGACTCTGTTTCTGCTGCTGAGTTTGCGCAGGTTTCCTCGTCTGACTCTGCTCGGTCTGTTCCTGTTTGATTATGAAGACACGTTCCTGCCCTTCATTCACAGCAGCTGCCCGGCTCTGAAATCACCGGACCTCCTGACCGACACGCCGCTGGATTGGCCGGGCTGGCGTCAGTGGGCGGAGTTTCTTCTGATGTACTTCCTGCTGCCCTATCAGCTGCTGTCAGCGTTCGCCTGGCGCTGGATGAGCTCTCATTACTGGACGGCTCGTGTGGTCATGCTGCACGCCGTCTTACTGACCGCTCTGGATGTGCACTTCTTCTGGACGCTGCTGAAGACGGGACAGATGAGGACGCTCCCTAAGCGTGTCTGGAAGGAGCTGGTGAGAGTGACCCTAGAGGAGACTGTGTTGGTGCTGCTCTGGTCCCTGGTCCCTCTGCTCTTCTGTAACTGTCTGTTCTACTACAACCTGTACATCTACCCCTTCAACACCGCAGcgctcctcaaacacacactgctgcacacacacacacagcacggggggatctgacacacacacactgagagacacacacacacactg
>XM_043260524.1
TAACTAAATCAGAAATATAGGAAACCAGGAAGATCTGGAAGGTGCTGAGCTGAAGTGAGgagctttctctttctcttctgttgTGGTCAGAGAagaaatgcatgtttacatGAATAAACCAGAAAGACGCTTTGAGACCGAAGAGAGACCAAGAGCTGATGACCAGCACTGAGACTGAGatGGACGTGAGGATCCCGGTGGAGTCTGAGTCTGAGGTGTGGTCTCTGTCTGAGTCTGAGTTCAGCTGTCACTGCTGCTATGAGGTTCTGGTGGAGCCCACCACACTCACCTGTGGACACAGCTTCTGCAGACACTGTCTGGCCAACTGGTGGGCCTCCGCTCGGCCCCGCGTCCGCACCGACTGCCCAGAATGCCGAGCGCTGTGGGTGGGCTTTCCCAAAGTCAACATCCTGCTCCGggacGCGGTGGAGAAGCTGTTCCCCGCTGACGTGAGCCGCCGGAAGCAGGCCGTCCTGAGCGATCCGTGGCTCTCTCATGTTCTCCAGGTGTTCCAGCAGCAGGAGAGGAGACAGGCCCCTCGCGCAGCTCCGCCACAGAACCCACCGCAGCTTCCTATAATGGACCAGCGGCTGTTTAATGTGTTGAATCAAGTACAGCTTGACATGTTGAATATGCCAGAGTTCAACATCCGAGGGATTTGCTCTGGAATCAGTATAGTGCTGTGCTGCATGGTcgtgttgGTGTTAGTATGGCGTGTGTACAGTGCCAGCTCCAGTCATGAGGTGCTGCTCACTAAACCTCTCAGCAGGTGGAGCGCTGATGATGTCACTCTGTGGGTGGAGCATCTGAGCGTCTGGACCAATCAGTATAAAGAAACCTTCCGCAGGGAGAAGATCAACggcaggttgCTGTTCTCTGTCAGTGACACTGATCTGTCGTCAGCTCCGTTCAACATCAGGAACGAGTCTCACAGACAGATCATCCTCCAGGAGATACACAGACTCAGACAGCGCCGGCTCTCACCCAGCCTCTGGGAGTacaagGACCTGTATTTAGGGAAGACTCTGTTTCTGCTGCTGAGTTTGCGCAGGTTTCCTCGTCTGACTCTGCTCGGTCTGTTCCTGTTTGATTATGAAGACACGTTCCTGCCCTTCATTCACAGCAGCTGCCCGGCTCTGAAATCACCGGACCTCCTGACCGACACGCCGCTGGATTGGCCGGGCTGGCGTCAGTGGGCGGAGTTTCTTCTGATGTACTTCCTGCTGCCCTATCAGCTGCTGTCAGCGTTCGCCTGGCGCTGGATGAGCTCTCATTACTGGACGGCTCGTGTGGTCATGCTGCACGCCGTCTTACTGACCGCTCTGGATGTGCACTTCTTCTGGACGCTGCTGAAGACGGGACAGATGAGGACGCTCCCTAAGCGTGTCTGGAAGGAGCTGGTGAGAGTGACCCTAGAGGAGACTGTGTTGGTGCTGCTCTGGTCCCTGGTCCCTCTGCTCTTCTGTAACTGTCTGTTCTACTACAACCTGTACATCTACCCCTTCAACACCGCAGcgctcctcaaacacacactgctgcacacacacacacagcacggggggatctgacacacacacactgagagacacacacacacactg

Function

NR:

description
PREDICTED: bifunctional apoptosis regulator-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043260445.1 True 1724 mRNA 0.54 8 29267132 29272544
XM_043260524.1 False 1601 mRNA 0.55 9 29267132 29272553

Neighbor

gene id symbol gene type direction distance location
txndc11 txndc11 coding downstream 1778 29258792 ~ 29265354 (-)
col5a3b col5a3b,LOC107723092,LOC107685048,LOC107572909 coding downstream 26292 29216981 ~ 29240840 (-)
olfm2b LOC107685041,LOC107572913,LOC107723090 coding downstream 51733 29208466 ~ 29215399 (-)
mvb12a LOC107723091,LOC107572914,LOC107685040,LOC107758385,LOC107662724,LOC107572912 coding downstream 58719 29204143 ~ 29208413 (-)
akap8l LOC107572911,LOC107723089,LOC107662712,LOC107560607,LOC107758371 coding downstream 63218 29197181 ~ 29203914 (-)
LOC122360529 NA coding upstream 698 29273251 ~ 29276704 (-)
LOC122357818 LOC107678317,LOC107575749,LOC107719897 coding upstream 11694 29284247 ~ 29289493 (-)
LOC122359260 LOC107680745,LOC107740699,LOC107680747,LOC107758392,LOC107662714,LOC107574731 coding upstream 47838 29320391 ~ 29326538 (-)
LOC122359579 LOC107680745,LOC107740699,LOC107680747,LOC107662714,LOC107758392 coding upstream 63043 29335596 ~ 29340571 (-)
mslnb LOC107566818,LOC107574164,LOC107707761 coding upstream 93924 29366477 ~ 29402378 (-)
G7574 NA non-coding downstream 108414 29156844 ~ 29158718 (-)
G7575 NA non-coding downstream 143080 29115496 ~ 29124052 (-)
G7591 NA non-coding downstream 249976 29015665 ~ 29017156 (-)
G7579 NA non-coding downstream 286014 28971894 ~ 28981118 (-)
G7551 NA non-coding downstream 465467 28792644 ~ 28801665 (-)
G7620 NA non-coding upstream 18208 29290761 ~ 29291343 (-)
G7624 NA non-coding upstream 20073 29292626 ~ 29293410 (-)
G7629 NA non-coding upstream 45028 29317581 ~ 29318226 (-)
G7637 NA non-coding upstream 74669 29347222 ~ 29347629 (-)
LOC122327126 NA non-coding upstream 154280 29426833 ~ 29427169 (-)
LOC122362981 LOC107662727,LOC107560596,LOC107685031,LOC107722572 other downstream 114587 29067982 ~ 29152545 (-)
G7563 ubl5,pin1,LOC107727173,LOC107685032,LOC107571794,LOC107662743 other downstream 135040 29049743 ~ 29132092 (-)
LOC122325037 sh2d3a,LOC107662707,LOC107685029,LOC107560576,LOC107727164 other downstream 154398 29101686 ~ 29112734 (-)
LOC122324333 NA other downstream 322514 28942988 ~ 28944618 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other downstream 741581 28523705 ~ 28525551 (-)
G7569 gtf3c1,LOC107678316 other upstream 29254 29301807 ~ 29310598 (-)
LOC122354733 LOC107678949,LOC107566822,LOC107713175,LOC107662686,LOC107758373,LOC107574162,LOC107662685 other upstream 138554 29411107 ~ 29434213 (-)
G7648 LOC107662685,LOC107678949 other upstream 153545 29426098 ~ 29476338 (-)
G7655 LOC107662685 other upstream 180206 29452759 ~ 29475388 (-)
G7816 NA other upstream 919648 30192201 ~ 30197848 (-)

Expression


Co-expression Network