mvb12a (LOC107723091,LOC107572914,LOC107685040,LOC107758385,LOC107662724,LOC107572912)


Basic Information

Item Value
gene id mvb12a
gene name LOC107723091,LOC107572914,LOC107685040,LOC107758385,LOC107662724,LOC107572912
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29204143 ~ 29208413 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043263483.1
CGGTGACGTCGCCGCGGTGCATGACGGGAATCGTAGTCTACCGCTTCTTCCTGTTCTCTGACTGCGGCAGTGAGTTCAGGTCAGTTCGTGTttggaaacaagaaaaaactCCATAAACAGCCTATGTCTGTGTTCGAGTCGTCTAGTGCCTTCAGCAGGCCCATCTCTGCAGTGGCCTGGGCGTCAAACGCCAGCACCTGCCCCGCTCAGTTCATCCTGatcaCTCAGACCGAAGATGGAGCCTCTGCTAACTTCATCCGGGGGTTTGCAATCAAGTCAGGATACTATCTGTGTTACAGTAAGGATCTGTCCCGTGGGATGGTGGTGGCAGATGTGCAGGTGATTACGGATAAAGAGACGATTCCTCACGGTTACTGCTACATCCCAGAATTCCTGGACTCCAaGGGGTCTGTCGGGAAGAAGAAGCGCATCTGTGTGCGGATCGTTCCTGTGGGCAGCGTTACGACGGCTGTTCTAGATCTCAAACTGACCGCCAGGAATAAGACCATGGTGCAGCAGTACACCTGCCTGGGgGACATGAATGGCTTCGTGGTGTGGTGTCTAAAGGGCCCGTTCTCCGCTCCGGCTCCTCAGGCCAAGCCTCGCAGTGTCAGTCTGGACATGCGCAGCCTCTCTCTGGAAGGAAGCGGACCCCCGCAGCCTCTCAAACCCAGcaaccacccTGAAGCCCCACCGAAAATCAGCCGTCGGCGCAGCAAGCTGGACACCAGCAGCTCGACGGAGGCCGTGTGTGACAGCGGGAACCACAGCAGCATCTACGGCATCACAGCCATGGATGGAGTTCCTTTCTCTCTACACCCGAAGTTTGAGTCTCAGTCTAActcaaaggtgtcTGTGAGCACGCTGAGCGACATCCGTATCAAATCAGTGCAGGACATCGAGAACGAGTATAACTACACGTTTGCGGTGGAGGAGCTGGCAGCGAGGAGAATCTGTCCTTCAGTGAGCGGCTGAAAGCGTTCCTCCCTCGAGTCCTGCCTCTGATCACCAAGCCACACAATCCTCCTGTTCTTCTGAAGTTCGAGCCGAACTCACACTACAGCTTTCGCGGGGCTGGTTCTGGGCGGtctccttctctcttttcttctctgggTTGGTTGAACGTGAAGGATTTCTTCATGCAAACACATTATGTGCGTGTTTCTGCATGTTACAGCTTTGCGTTTTTCACAACAGATGAACCAAAGTGCCTTCTCCGCAGAGATGTGTGCGTCCTTTTATAAGaccaaatattttatgtatctGTTTTGGGATTTTTAGCTGCAgtttagtatttaaaaagtgTGGTTACactaatattttgtatttatcgTATGAAAACTAAGTTTCGTGGGGaccaaaaaacatctttaaacattcttaaaactgTTGTATAATGTCATACTGCGGTGCTCTGTGAGTTACTCTTTGTAAACATTTGTACTTGCTTTCTTCAAATCTGcctttttgtgaaattttaataaaaatgatcgaATCCTGA

Function

NR:

description
PREDICTED: multivesicular body subunit 12A-like isoform X1

GO:

id name namespace
GO:0015031 protein transport biological_process
GO:0031902 late endosome membrane cellular_component
GO:0017124 SH3 domain binding molecular_function

KEGG:

id description
K12186 FAM125; ESCRT-I complex subunit MVB12

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043263483.1 True 1501 mRNA 0.50 10 29204143 29208413

Neighbor

gene id symbol gene type direction distance location
akap8l LOC107572911,LOC107723089,LOC107662712,LOC107560607,LOC107758371 coding downstream 229 29197181 ~ 29203914 (-)
lpar2b LOC107662720,LOC107560608,LOC107758384,LOC107685038 coding downstream 8666 29184982 ~ 29195477 (-)
LOC122355388 LOC107723083,LOC107685037 coding downstream 21455 29170642 ~ 29182688 (-)
wu:fk65c09 LOC107685033,LOC107723084,LOC107573413 coding downstream 34244 29165102 ~ 29169899 (-)
LOC122363056 NA coding downstream 63120 29139442 ~ 29141023 (-)
olfm2b LOC107685041,LOC107572913,LOC107723090 coding upstream 53 29208466 ~ 29215399 (-)
col5a3b col5a3b,LOC107723092,LOC107685048,LOC107572909 coding upstream 8568 29216981 ~ 29240840 (-)
txndc11 txndc11 coding upstream 50379 29258792 ~ 29265354 (-)
LOC122360084 LOC107740521 coding upstream 58719 29267132 ~ 29272553 (-)
LOC122360529 NA coding upstream 64838 29273251 ~ 29276704 (-)
G7574 NA non-coding downstream 45425 29156844 ~ 29158718 (-)
G7575 NA non-coding downstream 80091 29115496 ~ 29124052 (-)
G7591 NA non-coding downstream 186987 29015665 ~ 29017156 (-)
G7579 NA non-coding downstream 223025 28971894 ~ 28981118 (-)
G7551 NA non-coding downstream 402478 28792644 ~ 28801665 (-)
G7620 NA non-coding upstream 82348 29290761 ~ 29291343 (-)
G7624 NA non-coding upstream 84213 29292626 ~ 29293410 (-)
G7629 NA non-coding upstream 109168 29317581 ~ 29318226 (-)
G7637 NA non-coding upstream 138809 29347222 ~ 29347629 (-)
LOC122327126 NA non-coding upstream 218420 29426833 ~ 29427169 (-)
LOC122362981 LOC107662727,LOC107560596,LOC107685031,LOC107722572 other downstream 51598 29067982 ~ 29152545 (-)
G7563 ubl5,pin1,LOC107727173,LOC107685032,LOC107571794,LOC107662743 other downstream 72051 29049743 ~ 29132092 (-)
LOC122325037 sh2d3a,LOC107662707,LOC107685029,LOC107560576,LOC107727164 other downstream 91409 29101686 ~ 29112734 (-)
LOC122324333 NA other downstream 259525 28942988 ~ 28944618 (-)
G7527 LOC107575698,LOC107577169,LOC107575696 other downstream 678592 28523705 ~ 28525551 (-)
G7569 gtf3c1,LOC107678316 other upstream 93394 29301807 ~ 29310598 (-)
LOC122354733 LOC107678949,LOC107566822,LOC107713175,LOC107662686,LOC107758373,LOC107574162,LOC107662685 other upstream 202694 29411107 ~ 29434213 (-)
G7648 LOC107662685,LOC107678949 other upstream 217685 29426098 ~ 29476338 (-)
G7655 LOC107662685 other upstream 244346 29452759 ~ 29475388 (-)
G7816 NA other upstream 983788 30192201 ~ 30197848 (-)

Expression


Co-expression Network