LOC122363120 (LOC107722580)


Basic Information

Item Value
gene id LOC122363120
gene name LOC107722580
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056699.1
NCBI id CM032068.1
chromosome length 31761587
location 29806587 ~ 29808583 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043265106.1
TGAACATGTAATCGctgttaaacatttctttaaagacAGAGGAGGAGCCTGCAGTCTTACCGATATAAAGAGTCCTTGCATCAGACTAAACAGAATAAACAGTGACTTACAATCTGGGGAGAGATTTAGAAGATGACAATGATATTATTTTTGGTGGCACTTTTCCCGGTTGTACTGGGCAGTGACTGTAAGTTCATGCAGTTTGACTGCTCTGACGTCTACAACTCAGGACAGACGGCCAGCGGGATCTACTCCATCTATCCTGCAGGAGATGTTCCTGTCTGGGTTCACTGTGACATGATCTCAGATGGGAAAGATGAAGATAAAGGAGGATGGACGGTGATTCAGAGGAGAATGGATGGCAGCGTGAATTTCTATCGGCCGTGGGATCAGTACAAGAGAGGATTTGGGAATATAGAGAGTGAATACTGGCTGGggcTGGAGAACATGTATCAGCTGACACGAAACGGGAAGTACATGCTGAGAGTGGATCTGGAGGACTTTGAAGGAAGGAAGGGTTTCGCTCAGTACTCGTCTTTCTCTGTGGATTGTGAATGTTCTGGATATAAACTACAAGTTTCAGGGTTCACTGATGGAGGAGCAGGCAACTCTTTGATTGTCCACAACAATCAGAAATTCACAACGTTTGACAAGGATCAAGACGGCCATGCTGATAACTGTGCTAGAATGCGTCTCGGGGGGTTTTGGTACGCAAGCTGTCTGGAGGCAAACCCCAACGGTGTGTACTTATGGGGAAACGATAACACTAATTCCGCCATTGGTGTTGTCTGGTCGACCTGGAAAAACAATTTCACTTACAGTATGAAGTCTATTAGCATGAAAATCAGACGTGTATCTTAGAGACTTTAATGATTCCAGGAGCTATTGGTCTtataatatatgctttatatcaTACCTGTGCTAAAGAGTAAATTATGTAGGTCAGGGTGACTTTAATAAACTCCAGCACTGAaagca

Function

NR:

description
PREDICTED: microfibril-associated glycoprotein 4-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043265106.1 True 978 mRNA 0.44 5 29806587 29808583

Neighbor

gene id symbol gene type direction distance location
LOC122358417 LOC107721946,LOC107662706,LOC107560594 coding downstream 367 29799978 ~ 29806220 (-)
LOC122324192 zgc:92827,LOC107758210,LOC107665919,LOC107758399,LOC107573835,LOC107668524,LOC107573875 coding downstream 14350 29786585 ~ 29792237 (-)
ears2 ears2 coding downstream 211760 29589963 ~ 29594827 (-)
wfikkn1 wfikkn1,LOC107678954,LOC107758378 coding downstream 283344 29519894 ~ 29523243 (-)
zmp:0000001082 LOC107572597,LOC107755319,LOC107678952 coding downstream 287711 29502505 ~ 29518876 (-)
LOC122324036 LOC107571898,LOC107659785,LOC107659779,LOC107576778,LOC107571412,LOC107574527,LOC107675009 coding upstream 791 29809374 ~ 29811519 (-)
LOC122357555 sh2d3a,LOC107685029,LOC107662707,LOC107560576 coding upstream 13674 29822257 ~ 29832148 (-)
LOC122349594 si:ch211-15j1.5,LOC107574374,LOC107576777,LOC107725412,LOC100334101 coding upstream 37042 29845625 ~ 29848380 (-)
LOC122351861 primpol,LOC107656685,LOC107702393,LOC107750460 coding upstream 347126 30155709 ~ 30165350 (-)
LOC122350995 LOC107660492,LOC107757584,LOC107700259,LOC107548308 coding upstream 499380 30307963 ~ 30314051 (-)
G7675 cdc37 non-coding downstream 225460 29524195 ~ 29581127 (-)
G7686 NA non-coding downstream 253001 29522899 ~ 29553586 (-)
G7694 NA non-coding downstream 257385 29547872 ~ 29549202 (-)
G7683 LOC107739936,LOC107690077,LOC107566820 non-coding downstream 305890 29496887 ~ 29500697 (-)
G7654 LOC107662685 non-coding downstream 331736 29470716 ~ 29474851 (-)
G7751 NA non-coding upstream 77697 29886280 ~ 29886672 (-)
G7755 NA non-coding upstream 106085 29914668 ~ 29915054 (-)
G7761 NA non-coding upstream 209700 30018283 ~ 30018557 (-)
G7764 LOC107691293 non-coding upstream 223987 30032570 ~ 30037959 (-)
LOC122351377 NA non-coding upstream 289275 30097858 ~ 30099331 (-)
G7648 LOC107662685,LOC107678949 other downstream 330249 29426098 ~ 29476338 (-)
G7655 LOC107662685 other downstream 331199 29452759 ~ 29475388 (-)
LOC122354733 LOC107678949,LOC107566822,LOC107713175,LOC107662686,LOC107758373,LOC107574162,LOC107662685 other downstream 372374 29411107 ~ 29434213 (-)
G7569 gtf3c1,LOC107678316 other downstream 495989 29301807 ~ 29310598 (-)
LOC122362981 LOC107662727,LOC107560596,LOC107685031,LOC107722572 other downstream 654042 29067982 ~ 29152545 (-)
G7816 NA other upstream 383618 30192201 ~ 30197848 (-)
G7868 NA other upstream 821651 30630234 ~ 30630505 (-)
G8009 NA other upstream 1134915 30943498 ~ 30957486 (-)
G8091 abca1a,LOC107703854,LOC107746118,LOC107571910,LOC107570823 other upstream 1723486 31532069 ~ 31537416 (-)
G8089 abca1a,LOC107571910,LOC107703854,LOC108413301 other upstream 1741603 31550186 ~ 31554035 (-)

Expression


Co-expression Network